Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11320
- Subject:
- XR_001746411.2
- Aligned Length:
- 3247
- Identities:
- 757
- Gaps:
- 2483
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGTCGGCGGCGTCGGCGGCGGCGGCGACGGCGGCGGGGGCGGTAATGGCGGAGCTGGTGCAGGGGCAGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCTGTGGGGATGAAGGCCGAGGGCTTCGTGGATGCCCTGCACCGGGTCCGGCAGATTGCTGCTAAAATTGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAATTCCTCACTTGAATAATTCCACACCTCTAGTGGACCCCTCAGTATATGGATACGGAGTACAAAAACGGCC 222
Query 1 -----ATGCCTCCTA-----TAGGTAACCAGTTAGGGGCCTTGGTACATCAAAGGACGGTAATAACGGAAGAAT 64
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTGGATG------ATGGAGTAGGTAACCAGTTAGGGGCCTTGGTACATCAAAGGACGGTAATAACGGAAGAAT 290
Query 65 TCAAAGTGCCTGACAAAATGGTTGGATTTATTATCGGCAGGGGAGGTGAGCAGATTTCACGGATTCAAGCAGAA 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 TCAAAGTGCCTGACAAAATGGTTGGATTTATTATCGGCAGGGGAGGTGAGCAGATTTCACGGATTCAAGCAGAA 364
Query 139 TCTGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAGAGAGGCCCTGTGTACTTACCGGAACCCC 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 TCTGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAGAGAGGCCCTGTGTACTTACCGGAACCCC 438
Query 213 AGAAAGTATTGAACAAGCCAAACGGCTCCTGGGACAGATTGTGGACCGCTGTCGAAATGGACCTGGCTTTCATA 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 AGAAAGTATTGAACAAGCCAAACGGCTCCTGGGACAGATTGTGGACCGCTGTCGAAATGGACCTGGCTTTCATA 512
Query 287 ATGACATAGACAGCAACAGCACAATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTGGTCATCGGCAGA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 ATGACATAGACAGCAACAGCACAATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTGGTCATCGGCAGA 586
Query 361 GGAGGGGAAACAATCAAGCAGTTGCAGGAGCGGACAGGGGTGAAGATGGTCATGATCCAGGATGGCCCATTGCC 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 GGAGGGGAAACAATCAAGCAGTTGCAGGAGCGGACAGGGGTGAAGATGGTCATGATCCAGGATGGCCCATTGCC 660
Query 435 CACGGGAGCAGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAAGTACAGCAAGCAAGAGAAATGGTACTAG 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CACGGGAGCAGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAAGTACAGCAAGCAAGAGAAATGGTACTAG 734
Query 509 AGATTATCCGAGAAAAAGACCAAGCTGACTTTCGGGGTGTACGCGGCGATTTCAACTCTCGAATGGGAGGAGGC 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AGATTATCCGAGAAAAAGACCAAGCTGACTTTCGGGGTGTACGCGGCGATTTCAACTCTCGAATGGGAGGAGGC 808
Query 583 AGTATAGAGGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAGGAAGAAACGGGGAAATGATCAAAAAGAT 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 AGTATAGAGGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAGGAAGAAACGGGGAAATGATCAAAAAGAT 882
Query 657 CCAGAATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGGATTAGTCCAGAATATTACAGA-CAG--C 727
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |.| |
Sbjct 883 CCAGAATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGGATTAGTCCAGAA------AGAGCTGCCC 950
Query 728 AGGTC-----------------------------------------------GCT--TTC-TACGG-------- 743
||||| ||| ||| |||.|
Sbjct 951 AGGTCATGGGCCCTCCGGATCGGTGTCAGCATGCAGCGCATATCATCAGCGAGCTGATTCTTACAGCCCAGGAA 1024
Query 744 ACAGACG--TTAGGGCAGGC---GCAGGCCCACAGCCAGGAGCAG----------------------------- 783
|.||||| ||.|| |||| |||| |||||||..|.||
Sbjct 1025 AGAGACGGCTTTGG--AGGCCTGGCAG-----CAGCCAGAGGAAGAGGTCGTGGCCGTGGCGACTGGAGCGTGG 1091
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1092 GAGCCCCTGGTGGCGTCCAGGAGATAACATACACGGTGCCAGCCGATAAGTGTGGCCTCGTCATAGGCAAAGGG 1165
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1166 GGTGAGAACATCAAAAGCATCAACCAGCAGTCAGGGGCGCACGTGGAGCTTCAGAGGAACCCCCCTCCCAACAG 1239
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1240 CGACCCCAACCTGCGGAGATTCACCATCAGGGGGGTTCCCCAGCAGATCGAGGTGGCCAGGCAGCTCATAGATG 1313
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1314 AGAAAGTTGGCTTTCAGGCACCTCAAGGCAGATAAAGAAAGGGAGTGTTGATGGAGGACAGATGGGCCACTGCT 1387
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1388 CACCTCAATGGGGACGTAGAATGGCAGAAAGAGCCTTGGGCCAGCCTAAGTTGACGGGAGAGTCAAGCAGGGGA 1461
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1462 CCAATCTCGGAGCACCTGGAGCCTTCGGACAGAGTCCATTCAGCCAGCCACCTGCCCCACCTCATCAAAATACC 1535
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1536 TTTCCTCCAAGGAGCTCCGGGTGCTTCCCAAACATGGCTGCCAAGGTGAATGGGAACCCCCACAGCACCCCTGT 1609
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1610 GAGTGGTCCTCCGGCCTTTCTGACCCAGGGCTGGGGCAGCACCTACCAGGCGTGGCAGCAGCCCACACAGCAGG 1683
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1684 TCCCAAGCCAGCAGAGCCAGCCGCAGAGCAGCCAGCCCAACTACAGCAAGGCCTGGGAAGACTATTACAAAAAA 1757
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1758 CAGAGTCACGCCGCCAGCGCTGCTCCTCAGGCCAGCTCCCCACCGGACTACACAATGGCCTGGGCAGAATATTA 1831
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1832 CAGACAGCAGGTCGCTTTCTACGGACAGACGTTAGGGCAGGCGCAGGCCCACAGCCAGGAGCAGTAGGACAGCG 1905
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1906 TCCTCGTGGCCAACTCTCCCCTCAAAATCATTGTCAAAGAAAACCTATTTGTAACAGAGGTTTTTACATTTGCA 1979
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1980 AACCTTTTGATGAAGAACTGTTGTTTTGTTCTGTGAAACACTATATTTAGATTAACGGAATTTTTCTAAAAATC 2053
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2054 AGGAAAATTAGTTACTAAAAATTGCTGATCATTTTTGTTTCATTATTTTTGTTATTTCAAATGTATAAGCTCTG 2127
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2128 GGATTCTTTTTGGAGCAATACCTACAAAGTCAGGCACCAGAATGTGCCTCAGAGCTGTGACATTTCAACATGAT 2201
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2202 GGTTTTGGTTTGGTTTGGTTTTGTGTCCTTTTTATTTGCAGTTTTTTCTGTTGCAACAGAAAGTGGCTTGGAAG 2275
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2276 TCTTAGGTGGTATGTAACAAATTCTTTTTAAAAATTTTAAAGCAGTATTTAAGTATTCTTAAATGTGTAAATTC 2349
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2350 ATTTAATGTTTTACTTCTAATTTCTTGTATCTTGGCTGTCTGGTTTTATTGCATTTTTAAAAAAACTGAACTAT 2423
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2424 TATGTATTGTAATGAATGATGTGAATTCTGAACTGAGACAGATAATTGTATTGCTGTCCAACAGGGGTTGGGAG 2497
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2498 GGGCATTTTGTAGGGTTTGTATAATTTCTAGAGTTCGAAAGGGGTAATATAAAAATGTGCTCGTGTGTTTAGCC 2571
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2572 TACGTTTTTCTCATGCCTCCATTACCAGTTGCAATTGTGTATCTAAGACCTCCAAGCTTGTTTTTAAAACAAAA 2645
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2646 CAAAAAACCTTTCTCTATTATCTCAGAAATATAAATACTGTTATTTTTAATATTAAGAAATTCAATATAACTTT 2719
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2720 TAACACACACTGTGGAACATTAAACCGTATAAAAATGTAGTTATAACTATTTTTAATTCCAAGGTGTTGTTTGC 2793
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2794 TTTTTTCTTTTAAATATTTTCTTAATATTTTGTCAGATTAACTAGATGAATAAATAAATCTAGTATTAACCGCA 2867
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2868 TTATGAATTAAATAATTTTGATTTAATGAAAGGGATAATATGATTTCCAGTGTTTACTGTAGTGTATCTTGTAC 2941
Query 784 -------------------------------------------------------------------------- 783
Sbjct 2942 AGATAACATGTATTTTTAAAGGAAAAAAAACGGAATTGAAGCTATTTTTTCTTGCATTTCTAATTGACCTGAGG 3015
Query 784 -------------------------------------------------------------------------- 783
Sbjct 3016 GACATTCCGTTTGAAATGTACTGAAGTTACAGTTTCTGGTTTTTTCTCCTTATTTTTCTTATAATGCTTGAAAT 3089
Query 784 -------------------------------------------------------------------------- 783
Sbjct 3090 GTCTAACTATTAAAAAAGACAATTGGAAAATGTTATGCATGGGGTTTTTAAGAAAACAAAGTGTTCTTTTTATT 3163
Query 784 ----------------------------------------------------------------- 783
Sbjct 3164 TGACTGACAATTCATTTTACACTCTATATAATAAAATCTCCACAAGGCATCTTGTGGGCAAAGTC 3228
