Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11343
- Subject:
- NM_009823.1
- Aligned Length:
- 1824
- Identities:
- 654
- Gaps:
- 1080
Alignment
Query 1 ------------------------------------------------------------ATGCATGGATCGCC 14
||||.|||||||||
Sbjct 1 ATGGTGGGCGTCCCTGGAGCGGCCGCCTTCCAACTTGGTTGTGAGAAAAGGGTGCCAGCAATGCCTGGATCGCC 74
Query 15 TGTGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCACCATGCCACCCCTCCCACCAATAAATCCTGGAGGAC 88
|||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 75 TGTGGAAGTGAAGATACAGTCAAGATCCTCACCTCCCATCATGCCACCCCTCCCACCAATAAATCCTGGAGGAC 148
Query 89 CGAGGCCAGTGTCCTTCACTCCTACTGCATTAAGCAATGGCATCAACCATTCTCCTCCTACCCTGAATGGTGCC 162
||||||||||||||||.||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 149 CGAGGCCAGTGTCCTTTACTCCTACAGCATTAAGCAATGGCATCAACCATTCCCCTCCTACCCTGAATGGTGCC 222
Query 163 CCATCACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCC 236
|||||.||.||||||||||||||||||||.|||||||||||||||||.||.|||||.||.|||||.||..||||
Sbjct 223 CCATCGCCACCACAGAGATTCAGCAATGGGCCTGCCTCCTCCACATCGTCAGCACTAACGAATCAACAGCTGCC 296
Query 237 AGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGACA 310
.||.||||||||||||||.||.||||||||||||||||||||.||.|||||||||||.||||||||||||||.|
Sbjct 297 GGCTACTTGTGGTGCTCGGCAGCTCAGCAAGTTGAAACGCTTCCTCACCACTCTGCAGCAGTTTGGCAATGATA 370
Query 311 TCTCCCCTGAGATTGGGGAGAAGGTGCGGACTCTTGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAA 384
||||.||||||||.||.||||||||.||||||||.|||||.||..||||||||||||||||.||||||||.|||
Sbjct 371 TCTCACCTGAGATCGGCGAGAAGGTTCGGACTCTCGTTCTAGCCTTGGTGAACTCAACAGTAACAATTGAAGAA 444
Query 385 TTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAACCT 458
|||||.||.||||||||.||.||||||||||||||.||||||||.|||||||||||||||||||||||||||||
Sbjct 445 TTCCATTGCAAGCTCCAGGAGGCCACAAACTTTCCTCTTCGTCCATTTGTGATTCCATTTCTCAAGGCCAACCT 518
Query 459 GCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCTCAGC 532
|||||||||||||||.||||||||||||||.||.|||||.||||||||||||||.||||||||||||||.||||
Sbjct 519 GCCCCTGCTGCAGCGAGAACTGCTGCACTGTGCCCGGGCTGCCAAGCAGACCCCGTCCCAGTACCTGGCCCAGC 592
Query 533 ACGAACACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGA 606
|.||.|||||||||||||||||.||.||.|||||.|||||||||||.||.||..|||||||||||||.||.|||
Sbjct 593 ATGAGCACCTTCTGCTCAACACCAGTATCGCATCTCCTGCTGACTCTTCTGAACTGCTCATGGAGGTTCATGGA 666
Query 607 AATGGGAAGAGGCCCAGTCCAGAGAGCTG----CATAATACATCTAAAATCTATGGGAG-TA----GCTTCCAG 671
|||||.||||||||||||||.||.||..| .|.||||..|.|.||| ||| || .|.|||.|
Sbjct 667 AATGGAAAGAGGCCCAGTCCGGAAAGGAGGGACGAGAATAATTTTGAAA-------GAGATACAGTTCCTCCTG 733
Query 672 A---------CATGAGTATTTTTCGGGAACTCTTCAG--ATGC----CTGCACA--CCCGGTAAGAAACTCTAC 728
| ||.|||..| |.|.||| .|||| .||| |.||||| |||| |.||
Sbjct 734 AACCGCCTGCCAAGAGAGT-----GTGTACT-ATCAGCCCTGCTCCTCGGCACAGTCCCG--------CCCT-- 791
Query 729 TCTAGAGAATTTATGGGTCGACTGTTCC-----AGAAGCCTCAGGAGTACAGTTC--TGCCTTTTCCT------ 789
.|||||||| .|||.||| ||.|..|||||| | |||..|||.
Sbjct 792 -------------------CACTGTTCCCCTTATGAATCCT--GGGGGCCAGTTCCAT-CCTACTCCACCACCT 843
Query 790 -------------------------------------------------------------------------- 789
Sbjct 844 CTTCAGCACTATACACTAGAAGACATTGCAACTTCTCACCTGTATCGGGAACCAAACAAGATGCTAGAACACCG 917
Query 790 -------------------------------------------------------------------------- 789
Sbjct 918 AGAAGTTCGTGAGAGGCACCACAATCTTAGTCTCAATGGAGGCTATCAAGATGAGTTGGTAGACCACCGTTTGA 991
Query 790 -------------------------------------------------------------------------- 789
Sbjct 992 CAGAAAGGGAGTGGGCTGATGAATGGAAACACCTTGACCATGCACTGAATTGCATTATGGAAATGGTAGAGAAA 1065
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1066 ACTAGGCGCTCCATGGCAGTTCTGAGGCGCTGTCAGGAATCTGACCGTGAAGAACTCAACTATTGGAAACGGCG 1139
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1140 GTTTAATGAAAATACAGAGTTGAGGAAAACTGGGACTGAGTTGGTCTCTAGGCAGCACAGCCCTGGGAGTACAG 1213
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1214 ATTCTCTCAGCAACGATTCTCAGCGGGAATTTACCAGTAGACCAGCAACAGGATATGTGCCTGTGGAGTTTTGG 1287
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1288 AAGAAAACAGAAGCCGTGAATAAGGTGAAAATTCAGGCCATGTCAGAGGTACAGAAGGCTGTAGCTGAGGCAGA 1361
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1362 GCAAAAAGCCTTTGAAGTGATTGCAACGGAGAGAGCTCGAATGGAGCAGACCATAGCGGATGTCAAACGGCAGG 1435
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1436 CTGCAGAAGATGCTTTCCTGGTCATCAATGAGCAAGAAGAGTCCACAGAGAACTGCTGGAACTGTGGCCGAAAA 1509
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1510 GCCAGTGAGACGTGCAGTGGCTGCAACATTGCTCGCTACTGCGGCTCCTTCTGCCAGCATAAGGACTGGGAGCG 1583
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1584 GCACCACCGCCTCTGTGGCCAGAGTCTACATGGCCACAGTCCCCACAGCCAGAGCAGGCCACTGCTCCCTGGAG 1657
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1658 GGCGGGGCTCAGCCAGGTCTGCTGACTGCAGTGTGCCCAGCCCAGCCCTGGACAAGACCTCAGCTACCACCTCA 1731
Query 790 ------------------------------------------------ 789
Sbjct 1732 CGGTCCTCAACACCTGCCTCTGTGACAGCCATTGATGCCAACGGGCTC 1779
