Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11343
Subject:
XM_011529101.2
Aligned Length:
1887
Identities:
715
Gaps:
1143

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGGTTTCACCATGTTGGCCAGGCTCGTCTTGAACTCCTGACCTCAGGTGATCTGCCTGCATTGGCCTCCCA  74

Query    1  -------------------------------------------ATGCATGGATCGCCTGTGGAAGTGAAGATAC  31
                                                       ||||.||||||||||||||||||||||||||
Sbjct   75  ACGTGCTGGGATTACAGTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATAC  148

Query   32  AGTCCAGATCCTCACCTCCCACCATGCCACCCCTCCCACCAATAAATCCTGGAGGACCGAGGCCAGTGTCCTTC  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTCCAGATCCTCACCTCCCACCATGCCACCCCTCCCACCAATAAATCCTGGAGGACCGAGGCCAGTGTCCTTC  222

Query  106  ACTCCTACTGCATTAAGCAATGGCATCAACCATTCTCCTCCTACCCTGAATGGTGCCCCATCACCGCCACAGAG  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACTCCTACTGCATTAAGCAATGGCATCAACCATTCTCCTCCTACCCTGAATGGTGCCCCATCACCGCCACAGAG  296

Query  180  ATTCAGCAATGGTCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCTC  253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATTCAGCAATGGTCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCTC  370

Query  254  GACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGACATCTCCCCTGAGATTGGG  327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGACATCTCCCCTGAGATTGGG  444

Query  328  GAGAAGGTGCGGACTCTTGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCA  401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGAAGGTGCGGACTCTTGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCA  518

Query  402  AGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCTGCTGCAGCGGG  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAACCTGCCCCTGCTGCAGCGGG  592

Query  476  AACTGCTGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCTCAGCACGAACACCTTCTGCTC  549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AACTGCTGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCTCAGCACGAACACCTTCTGCTC  666

Query  550  AACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAG  623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAG  740

Query  624  TCCAGAGAG-------CTGCATA------ATACATCTAAAAT--CT-ATGGGAGTAGCTTCCAGACA--TGAGT  679
            |||||||||       ..|.|||      |||.|...|.|||  || .||     |||.|||.|.||  .||||
Sbjct  741  TCCAGAGAGGAGAGAAGAGAATAGTTTTGATAGAGACACAATTGCTCCTG-----AGCCTCCTGCCAAGAGAGT  809

Query  680  ATTTTTCGGGAACTCTTCAGATGCCTGCACACCCGGTA-AGAAACT-CTACTCTAGAGAATTTATGGGTCGACT  751
            ||       |.|| |.||||  .|||||.| |.|||.| ||    | ||.||||                .|||
Sbjct  810  AT-------GTAC-CATCAG--CCCTGCTC-CTCGGCACAG----TCCTGCTCT----------------CACT  852

Query  752  GTTCCAGAAGCCTCAGGAGTACAG-------------TTCTGCCTTTTCCT-----------------------  789
            ||.||     |||||.||.|.|.|             |.||.||    |||                       
Sbjct  853  GTGCC-----CCTCATGAATCCCGGGGGCCAATTCCATCCTACC----CCTCCACCTCTTCAGCATTACACCTT  917

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct  918  AGAGGATATTGCAACTTCTCACCTGTATCGGGAACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGATAGAC  991

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct  992  ACCACAGTCTTGGTCTAAATGGAGGCTATCAAGATGAGTTGGTAGATCATCGTTTGACAGAAAGGGAATGGGCT  1065

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1066  GATGAATGGAAACATCTTGACCATGCGCTGAATTGCATTATGGAAATGGTAGAGAAAACAAGGCGCTCTATGGC  1139

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1140  AGTTCTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTCAACTACTGGAAAAGACGGTACAATGAAAACACAG  1213

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1214  AGCTGAGGAAAACGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAATGAT  1287

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1288  TCTCAGAGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTACCTGTGGAGTTTTGGAAAAAAACAGAAGAAGC  1361

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1362  TGTGAATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTG  1435

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1436  AAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCT  1509

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1510  TTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGAGAACTGCTGGAACTGTGGCCGCAAAGCCAGCGAGACATG  1583

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1584  CAGTGGCTGCAATATCGCGCGATACTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCGGCACCACCGCCTCT  1657

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1658  GTGGTCAGAACCTGCATGGCCAGAGCCCCCACGGCCAGGGCCGGCCGCTGCTTCCTGTAGGCAGGGGCTCCTCT  1731

Query  790  --------------------------------------------------------------------------  789
                                                                                      
Sbjct 1732  GCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACCTCGGCAACCACATCGCGTTCCTCAAC  1805

Query  790  -------------------------------------  789
                                                 
Sbjct 1806  ACCTGCTTCTGTGACAGCTATCGACACCAACGGACTC  1842

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