Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11348
- Subject:
- NM_001310732.1
- Aligned Length:
- 1989
- Identities:
- 284
- Gaps:
- 1674
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACCAGCCCAGAGGGCGCGCAAAACAAGGAAATCGACTGTCTGAGTCCAGAGGCGCAAAGACTGGCGGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCTCGCAGCGAAGCGTGCAGCCCGAGCCGAGGCTCGAGAGATCCGGATGAAGGAGCTGGAACGGCAGCAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGAGATCTATCAAGTCCAGAAGAAATATTATGGGCTGGATACAAAATGGGGCGACATCGAGCAGTGGATGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACAGCGAGCGCTACTCTCGTAGATTCCGGAGAAACACGTCGGCTTCTGACGAAGACGAGCGCTTGTCCGTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGTCGCGGCAGCCTAAGGGCACAGCCCGAGCTGGAGTATGGGAGTCCCTACGCCTGGACTAACGGTTATGACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGACTATTGTGGATCCCAGTCCCTAAGTAGAAGATCTGGCAGGAATTCCAGCTTCAGCGGCGGTGATGGCCGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCTCTACTTTGTCATCCTGCAGAGAGGAGAAGTTGGGACTCTCCTGCTCCAACCTTGGCCTTCCCAGCAGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTGCTTCCAAACCCCTGTCTACCCAGAATGGATCCCGGGCGTCCATGCTGGATGAGAGCAGCCTCTATGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCGAAGGGGAAGCGCCTGTGGTTCTCGAGCACCCTCAGAATATGGCAGCCACCTCAACTCCAGCTCCCGGGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTTCTAGGGCCAGCTCTGCAAGGGCCAGTCCTGTGGTAGAAGAAAGACCAGACAAAGACTTTGCTGAGAAGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCCGTAACATGCCTAGCCTGTCTGCAGCCACACTGGCATCTCTGGGTGGGACTTCCTCCCGGAGAGGGAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGATACCTCCATCTCCATGGACACCGAAGCATCCATCAGGGAAATCAAGGAACTTAATGAGTTAAAGGACCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTCAGGATGTAGAAGGCAAATACATGCAGGGACTGAAAGAGATGAAGGACTCGCTGGCCGAAGTTGAGGAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTACAAGAAAGCTATGGTCTCCAACGCCCAGCTAGACAATGAGAAGACCAACTTCATGTACCAGGTGGACACAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGAAGGACATGCTGCTGGAGCTGGAAGAGCAGCTGGCCGAGTCTCAGCGGCAATACGAGGAGAAGAACAAGGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTCGAGAGGGAGAAGCATGCCCACAGCATCCTGCAGTTCCAGTTTGCCGAAGTGAAAGAGGCCCTGCGGCAAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAGAGATGCTCGAGGAAATCCGACAGCTGCAGCAGAAACAGGCGGGTTTTATCAGGGAGATTTCTGATCTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGAAACGATAGAATGGAAAGACAAAAAGATAGGGGCATTAGAAAGACAGAAAGAGTTCTTTGATTCCATAAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCGAACGAGATGACCTTAGAGAAGAAACAGTCAAGCTGAAGGAGGAGTTGAAGAAACATGGAATAATCCTAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCAGAAATAGCCACCAACGGAGAGACTTCAGACACAGTAAATGACGTTGGGTATCAAGCCCCTACGAAGATAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAAAAGAAGAGCTGAATGCCCTCAAGTCGGCCGGGGAGGGGACCCTAGACGTTAGGTTGAAAAAGCTCATTGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAACGGGAATGTCTGTTGGAACAGATTAAGAAGCTCAAAGGGCAGCTGGAGGGAAGACAGAAGAACAACAAGCT 1628
Query 1 -----------------------------------AT-----------GCATGTAATGGACCTACAAAGGGATG 28
|| ||||||.|||||.||.|||||.||||
Sbjct 1629 GGACCTTCTTCGAGCCGAGGACGGTATCTTGGAGAATGGGACAGACGCGCATGTCATGGATCTGCAAAGAGATG 1702
Query 29 CCAACAGACAGATCAGCGACCTCAAATTTAAACTTGCAAAATCTGAGCAAGAGATAACTGCATTAGAACAAAAT 102
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1703 CCAACAGACAGATCAGCGACCTCAAATTTAAACTTGCAAAATCTGAGCAAGAGATAACTGCCTTAGAACAAAAT 1776
Query 103 GTAATAAGGTTAGAGAGTCAAGTATCACGTTACAAATCAGCGGCTGAAAATGCAGAAAAAATAGAAGATGAACT 176
|||||||||||||||||.||||||.|.||.||...||||||.||.|||||||||||||||||||||||||||||
Sbjct 1777 GTAATAAGGTTAGAGAGCCAAGTAACGCGCTATCGATCAGCCGCCGAAAATGCAGAAAAAATAGAAGATGAACT 1850
Query 177 TAAGGCAGAAAAACGGAAACTCCAAAGAGAGCTCCGCTCTGCATTGGATAAAACAGAAGAGCTCGAGGTGAGCA 250
.|||||||||||||||||.|||||.||||||||.|||||||||.||||.|||||||||||||||||||||||||
Sbjct 1851 AAAGGCAGAAAAACGGAAGCTCCAGAGAGAGCTTCGCTCTGCACTGGACAAAACAGAAGAGCTCGAGGTGAGCA 1924
Query 251 ACGGCCACTTAGTGAAGCGTCTGGAAAAAATGAAAGCAAATCGGAGTGCACTCTTGTCCCAGCAG 315
||||||||.|.||.|||||.||||||||.||||||||.||.||.||.||.||||||||||||||.
Sbjct 1925 ACGGCCACCTCGTAAAGCGACTGGAAAAGATGAAAGCCAACCGCAGCGCTCTCTTGTCCCAGCAA 1989
