Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11376
Subject:
XM_024449282.1
Aligned Length:
3341
Identities:
1893
Gaps:
1435

Alignment

Query    1  ATGCCGGCCGCCGGGAGTAACGAGCCGGACGGCGTCCTCAGCTATCAGAGACCAGATGAAGAAGCTGTGGTGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TCAGGGTGGGACCAGTACAATTCTCAACATTCACTATGAAAAAGAAGAGCTGGAAGGTCACAGAACTCTGTATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGGGAGTTCGGATGCCGCTTGGCCGGCAGAGCCATCGGCATCACCGCACTCATGGCCAGAAGCACCGGAGACGA  222
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  -----------ATGCCGCTTGGCCGGCAGAGCCATCGGCATCACCGCACTCATGGCCAGAAGCACCGGAGACGA  63

Query  223  GGGCGGGGCAAAGGAGCCAGCCAGGGGGAGGAAGGCCTGGAAGCCCTGGCCCACGACACACCATCTCAGCGTGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   64  GGGCGGGGCAAAGGAGCCAGCCAGGGGGAGGAAGGCCTGGAAGCCCTGGCCCACGACACACCATCTCAGCGTGT  137

Query  297  TCAGTTCATTCTTGGCACCGAGGAAGATGAAGAGCATGTGCCTCATGAGCTGTTTACAGAGCTGGATGAGATCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  138  TCAGTTCATTCTTGGCACCGAGGAAGATGAAGAGCATGTGCCTCATGAGCTGTTTACAGAGCTGGATGAGATCT  211

Query  371  GTATGAAAGAGGGAGAAGATGCTGAGTGGAAGGAAACAGCCAGGTGGCTGAAGTTTGAAGAAGATGTTGAAGAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  212  GTATGAAAGAGGGAGAAGATGCTGAGTGGAAGGAAACAGCCAGGTGGCTGAAGTTTGAAGAAGATGTTGAAGAT  285

Query  445  GGGGGAGAACGCTGGAGCAAGCCTTATGTGGCAACCCTTTCATTGCACAGCCTGTTTGAGCTAAGGAGCTGCCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  286  GGGGGAGAACGCTGGAGCAAGCCTTATGTGGCAACCCTTTCATTGCACAGCCTGTTTGAGCTAAGGAGCTGCCT  359

Query  519  TATTAATGGAACAGTCCTCCTGGATATGCATGCAAATAGCATAGAAGAAATTTCAGACCTGATCCTGGATCAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  360  TATTAATGGAACAGTCCTCCTGGATATGCATGCAAATAGCATAGAAGAAATTTCAGACCTGATCCTGGATCAGC  433

Query  593  AAGAACTGTCCAGTGACCTGAATGACAGCATGAGGGTTAAAGTGCGGGAAGCCCTTCTCAAAAAGCATCATCAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  434  AAGAACTGTCCAGTGACCTGAATGACAGCATGAGGGTTAAAGTGCGGGAAGCCCTTCTCAAAAAGCATCATCAT  507

Query  667  CAGAATGAAAAGAAGAGAAACAACCTCATTCCCATTGTTCGCTCCTTTGCTGAGGTTGGCAAGAAGCAGTCTGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  508  CAGAATGAAAAGAAGAGAAACAACCTCATTCCCATTGTTCGCTCCTTTGCTGAGGTTGGCAAGAAGCAGTCTGA  581

Query  741  TCCTCATTTGATGGATAAACATGGTCAAACCGTGTCTCCTCAGTCTGTTCCAACTACAAATCTTGAAGTAAAAA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  582  TCCTCATTTGATGGATAAACATGGTCAAACCGTGTCTCCTCAGTCTGTTCCAACTACAAATCTTGAAGTAAAAA  655

Query  815  ATGGAGTGAATTGTGAACATAGTCCTGTGGATTTAAGCAAGGTAGACCTTCATTTCATGAAAAAAATTCCTACT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  656  ATGGAGTGAATTGTGAACATAGTCCTGTGGATTTAAGCAAGGTAGACCTTCATTTCATGAAAAAAATTCCTACT  729

Query  889  GGGGCCGAGGCCTCCAATGTCCTGGTTGGAGAGGTGGATATTTTGGACCGTCCCATTGTTGCCTTTGTGAGGCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  730  GGGGCCGAGGCCTCCAATGTCCTGGTTGGAGAGGTGGATATTTTGGACCGTCCCATTGTTGCCTTTGTGAGGCT  803

Query  963  GTCTCCAGCTGTTCTTCTCTCAGGCCTAACAGAAGTGCCAATCCCAACAAGATTTTTGTTTATCTTATTGGGTC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  804  GTCTCCAGCTGTTCTTCTCTCAGGCCTAACAGAAGTGCCAATCCCAACAAGATTTTTGTTTATCTTATTGGGTC  877

Query 1037  CAGTAGGGAAAGGTCAGCAGTACCATGAGATTGGCAGATCCATGGCCACCATCATGACAGATGAGATTTTTCAT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  CAGTAGGGAAAGGTCAGCAGTACCATGAGATTGGCAGATCCATGGCCACCATCATGACAGATGAGATTTTTCAT  951

Query 1111  GACGTAGCATATAAGGCAAAAGAGCGAGATGATCTCCTGGCGGGGATTGATGAGTTCCTAGACCAGGTGACGGT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  952  GACGTAGCATATAAGGCAAAAGAGCGAGATGATCTCCTGGCGGGGATTGATGAGTTCCTAGACCAGGTGACGGT  1025

Query 1185  GCTCCCTCCAGGAGAGTGGGATCCCTCCATTAGAATTGAGCCACCCAAAAATGTCCCTTCCCAGGAGAAAAGGA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  GCTCCCTCCAGGAGAGTGGGATCCCTCCATTAGAATTGAGCCACCCAAAAATGTCCCTTCCCAGGAGAAAAGGA  1099

Query 1259  AAATGCCTGGAGTTCCAAATGGAAATGTTTGCCACATAGAACAGGAACCACATGGGGGTCACAGTGGGCCAGAA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100  AAATGCCTGGAGTTCCAAATGGAAATGTTTGCCACATAGAACAGGAACCACATGGGGGTCACAGTGGGCCAGAA  1173

Query 1333  CTTCAGCGCACTGGGCGGCTATTTGGGGGCTTGGTGCTGGACATCAAGCGGAAGGCCCCCTGGTACTGGAGCGA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  CTTCAGCGCACTGGGCGGCTATTTGGGGGCTTGGTGCTGGACATCAAGCGGAAGGCCCCCTGGTACTGGAGCGA  1247

Query 1407  CTACCGAGATGCACTCAGCTTACAGTGTTTGGCTTCCTTTCTGTTCCTGTACTGTGCCTGCATGTCACCTGTCA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248  CTACCGAGATGCACTCAGCTTACAGTGTTTGGCTTCCTTTCTGTTCCTGTACTGTGCCTGCATGTCACCTGTCA  1321

Query 1481  TCACCTTTGGGGGACTGCTTGGAGAAGCCACTGAGGGACGCATAAGTGCAATTGAATCCTTGTTTGGAGCTTCC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322  TCACCTTTGGGGGACTGCTTGGAGAAGCCACTGAGGGACGCATAAGTGCAATTGAATCCTTGTTTGGAGCTTCC  1395

Query 1555  ATGACTGGGATTGCTTATTCCTTGTTTGCGGGACAGGCTCTCACCATCCTGGGAAGTACTGGACCAGTGCTTGT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396  ATGACTGGGATTGCTTATTCCTTGTTTGCGGGACAGGCTCTCACCATCCTGGGAAGTACTGGACCAGTGCTTGT  1469

Query 1629  GTTTGAAAAGATTTTGTTCAAATTCTGCAAAGACTATGCTCTTTCATACCTCTCCCTGCGAGCTTGTATTGGAC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470  GTTTGAAAAGATTTTGTTCAAATTCTGCAAAGACTATGCTCTTTCATACCTCTCCCTGCGAGCTTGTATTGGAC  1543

Query 1703  TGTGGACCGCTTTCCTGTGTATTGTCCTTGTGGCAACTGATGCCAGTTCCCTTGTCTGCTACATTACCCGTTTC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544  TGTGGACCGCTTTCCTGTGTATTGTCCTTGTGGCAACTGATGCCAGTTCCCTTGTCTGCTACATTACCCGTTTC  1617

Query 1777  ACTGAAGAAGCATTTGCCTCCCTAATTTGCATTATTTTCATCTATGAAGCAATAGAAAAACTGATTCACCTGGC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618  ACTGAAGAAGCATTTGCCTCCCTAATTTGCATTATTTTCATCTATGAAGCAATAGAAAAACTGATTCACCTGGC  1691

Query 1851  AGAGACCTACCCCATCCACATGCACAGCCAGCTGGACCACCTTAGCCTCTATTACTGCAGGTGTACTCTGCCAG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692  AGAGACCTACCCCATCCACATGCACAGCCAGCTGGACCACCTTAGCCTCTATTACTGCAGGTGTACTCTGCCAG  1765

Query 1925  AGAATCCAAACAATCACACCCTCCAGTACTGGAAGGACCACAACATCGTGACAGCAGAAGTCCACTGGGCTAAC  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1766  AGAATCCAAACAATCACACCCTCCAGTACTGGAAGGACCACAACATCGTGACAGCAGAAGTCCACTGGGCTAAC  1839

Query 1999  CTGACTGTCAGTGTAAGTC---------------------TGGGAGCTG-------------------------  2026
            |||||||||||||.|.|.|                     |||||.|||                         
Sbjct 1840  CTGACTGTCAGTGAATGCCAGGAGATGCATGGAGAGTTCATGGGATCTGCGTGCGGCCATCATGGACCCTACAC  1913

Query 2027  -CCAGATGTCC----------------TAGCATTGTGACCAC-------------------------AGGTTTA  2058
             ||.|||||||                |..|.||.|.|||||                         |.|||||
Sbjct 1914  TCCTGATGTCCTCTTTTGGTCCTGTATTCTCTTTTTCACCACCTTCATCCTCTCAAGCACCTTAAAGACGTTTA  1987

Query 2059  GGAGGGACTTCTAAG-----------------------------------------------------------  2073
            .||.|        ||                                                           
Sbjct 1988  AGACG--------AGCCGTTATTTCCCAACCAGAGTACGCTCCATGGTGAGTGACTTTGCTGTTTTCCTCACTA  2053

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2054  TCTTCACAATGGTGATTATTGATTTTTTGATTGGAGTCCCATCACCAAAGCTTCAAGTTCCCAGTGTGTTCAAG  2127

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2128  CCAACAAGGGATGATCGCGGATGGATTATTAATCCCATTGGCCCCAATCCCTGGTGGACTGTGATAGCTGCAAT  2201

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2202  TATCCCAGCTCTTCTCTGTACTATCTTGATATTCATGGATCAGCAGATCACAGCCGTCATTATTAACAGGAAGG  2275

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2276  AACATAAGCTCAAGAAAGGCTGTGGCTACCACCTGGACCTACTGATGGTGGCCATCATGCTGGGTGTCTGCTCC  2349

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2350  ATCATGGGCCTGCCCTGGTTTGTAGCTGCAACTGTCTTGTCCATCACACATGTGAACAGCCTCAAGCTAGAATC  2423

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2424  TGAATGCTCTGCTCCTGGAGAACAGCCCAAGTTCCTGGGCATCCGAGAACAGAGAGTGACAGGCCTTATGATCT  2497

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2498  TTGTGCTGATGGGCTGCTCAGTCTTCATGACGGCTATCTTAAAGTTTATTCCAATGCCAGTACTCTACGGAGTT  2571

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2572  TTCCTTTACATGGGAGTTTCTTCACTACAGGGAATTCAGTCTCAGTTTCCATTTCTGTCCAGAGGAAATGGTGT  2645

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2646  TACCTACCTTTCAGAGCAGTTCTTTGATCGTCTAAAGCTCTTTGGGATGCCCGCAAAGCACCAGCCAGATTTCA  2719

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2720  TCTACCTGCGGCATGTGCCGCTGCGCAAAGTGCACCTCTTCACCCTCATCCAGTTGACCTGTCTCGTCCTGCTC  2793

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2794  TGGGTCATCAAGGCATCTCCAGCTGCCATTGTTTTCCCAATGATGGTTTTGGCCTTGGTCTTTGTCAGGAAAGT  2867

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2868  CATGGATCTCTGTTTCTCTAAGCGAGAGCTGAGCTGGCTAGATGATCTCATGCCTGAAAGCAAAAAGAAGAAGT  2941

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 2942  TGGATGATGCCAAAAAGAAGGCCAAGGAGGAAGAGGAGGCTGAGAAAATGTTAGAAATTGGGGGAGACAAGTTT  3015

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 3016  CCCTTAGAGAGCAGGAAGTTACTAAGTAGTCCTGGAAAGAACATCAGTTGCAGATGTGACCCCTCTGAGATTAA  3089

Query 2074  --------------------------------------------------------------------------  2073
                                                                                      
Sbjct 3090  TATATCTGATGAAATGCCTAAAACTACAGTTTGGAAAGCTCTCAGTATGAATTCTGGAAATGCAAAGGAAAAGA  3163

Query 2074  -----------  2073
                       
Sbjct 3164  GTCTCTTCAAC  3174

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