Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11391
- Subject:
- XR_002958675.1
- Aligned Length:
- 4348
- Identities:
- 629
- Gaps:
- 3642
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCATCCTATGAATTGGGTCATTCATGTCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCCCATGGGCTTTACATAGGGCAAGAGAACATTTCTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTCAAATTACAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTTTCTTTGCAAATGAAATATGAAATTTAGAGGCTCTTCTAAACACTTTAAATTTGATTTGACATTTTCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGATGTAAGTTTTAGAGAATGAGATTCTCCATAAAAATGACCCTTTCATGCTGTGGCCTCCATAGAAGATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTCCTCTATGCACACGCACCTCTGGGATCTCTCTGCCTCCAAATATCATCTTTTTTTTTTTTTTTTTTTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAGACAGAGTGTTGCTCCTCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGACTCACTGCAACCTCCGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCGAGTTTAAGCGATTCTTCTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAGTTTTAGTAGAGATGGGGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCAGCCTCTCCAAGTGCTGGGATTACAGGCATCAGCCACTATGCCCGGCTGGGATCATATGTTCCACACAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGTTGAATATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTCTCTGGTGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTTTGCAAATGCATCCCTTGTGTAATTTGTAGGTCACCGCGCCATGGGAACACGCTACCATGGGAAGGGAGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTGAGACGCGCAGGGAGGCTCCAGACAGGCTGGCCTGGGACACCAGCCGCTGCCCTTCCATAACATGGGGACAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGAGGGCAAAAGTTCAGCCCAACACGGAGGATCTTCGGGCAGGAGATGGGGAAGAAGGAGAAGCAGGAAGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAGCTCAGTGTGGGGGCGCGCATGGCATCCCGGTGGGACATCTGAGGCCCACACCCACCTGCTGTCCCTCCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCACGGTGGCCACCGAGGGTGAAGGCCTGGGGGGAGGCAGACGCCTGGCCCTTTACTCTCCCTCCCTGTCCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGCCGCTGGGTGGGGGCCGTCTCTGGGATGATCCCCGAGGGCAGGATCCGGGAGTCCCTGCAGAGGCATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGTCTGTCTTGATGGTGGAGTGGCGGCTCCAGCTGGGCGGGACCACCAGGGGAGGGGCTTGTGCTCTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCAGCCTGGTGTGGACCCACCTCCCGGGCGCTGGCTGCAATGACTTTCTCTTTCCCTTTGCAATTGCCTTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTGCCGCACAGAGCGGCCTGTCTTTATCAGAGGTCCCTCTGCCAGGGGGAGGGCCCCAGAGAAAACCAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGGTGAGAGACTGAGGAAGATAAAGCGTCCCAGGGCCTCCTACACCAGCGCCTGAGCAGGAAGGGGGAGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCATGACTACGAGGCCCTGGGAGGTCACTTTAGGGAGGGCTGTCCTGAAACCTGGAGCCTGGAGCAGAAAGTGA 2072
Query 1 -------------------------------------------------ATGAATCCACAGATCAGAAATCCGA 25
|||||.||.||..|||||||..|..
Sbjct 2073 AACCCTGGTGCTCCAGACAAAGATCTTAGTCGGGACTAGCCGGCCAAGGATGAAGCCTCACTTCAGAAACACAG 2146
Query 26 TGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCTATGGTCGGAGCTACACT 99
|||||||.|||||||||||||||||||.|.||||||||.|.||...|||||||||.|.|.|||||| .|||..|
Sbjct 2147 TGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGA-ATACCGT 2219
Query 100 -TGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACAGGGGTCTTTCGAGGCC 172
|||||||||||.||||||||||.||| |||.|.|||||..|.||.||.||||.||..|.||||||||||||
Sbjct 2220 CTGGCTGTGCTACGAAGTGAAAACAAA---GGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCC 2290
Query 173 AGGTGTATTTCGAGCCTCAGTACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCT 246
|||||||||.|.|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2291 AGGTGTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCT 2364
Query 247 TACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATT 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2365 TACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATT 2438
Query 321 CCTGTCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACC 394
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2439 CCTGGCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACC 2512
Query 395 GAAGGGCGCTCTGCAGGCTGAGTCAGGCAGGAGCCCGCGTGAAGATCATGGACTATGAAGAATTTGCATACTGC 468
|||||||||||||||||||||||||||||||.||||||||||||||.||||||.||||||||||||||||||||
Sbjct 2513 GAAGGGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTATGGACGATGAAGAATTTGCATACTGC 2586
Query 469 TGGGAAAACTTTGTGTACAATGAAGGTCAGCAATTCATGCCTTGGTACAAATTCGATGAAAATTATGCATTCCT 542
|||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||.||||||||||||||
Sbjct 2587 TGGGAAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCT 2660
Query 543 GCACCGCACGCTAAAGGAGATTCTCAGG------CTAAGAATCTTCTCTGTGGCTTTTACGGCCGCCATGC--- 607
|||||||||||||||||||||||||||| ||.|||..|.| ||| |||||
Sbjct 2661 GCACCGCACGCTAAAGGAGATTCTCAGGTGGATCCTGAGACCCAT---TGT---------------CATGCAGA 2716
Query 608 --GGAGCTGCGCT-TCTTGGACCTGGTTCCTTCTTTG--------CAGT-TGGACCCGGCCCAGATCTACAGGG 669
||.|||.| || |||||| ||||.|| |.|| | ||...|.|| |.||||..||
Sbjct 2717 AAGGTGCTTC-CTCTCTTGG----------TTCTGTGACGACATACTGTCT---CCTAACACA-AACTACGAGG 2775
Query 670 TCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCGTGCGTTCCT--TCAGG 741
||||.||||.||..||.||||||||.||| ||.|.| |||||.|||||.|||...|.|||||| .||||
Sbjct 2776 TCACCTGGTACACATCTTGGAGCCCTTGC----CCAGAG--TGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGG 2843
Query 742 AGAACACA--CACG------------------------------------------------------------ 753
|||| .|||
Sbjct 2844 ----CACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCTGGGATACAGATTACCAGGAGG 2913
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2914 GGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGGCTACAAAGATTTTAAATATTGTTGGGAA 2987
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2988 AACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGACTAAAATACAACTTTCTATTCCTGGACAG 3061
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3062 CAAGCTGCAGGAGATTCTCGAGTGAGGGGTCTCCCCGGGCCTCATGGTCTGTCTCCTCTAGCCTCCTGCTCATG 3135
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3136 TTGTGCAGGCCTCCCCTCCATCCTGGACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCCTGGCCTCAGG 3209
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3210 GCCATTCCATAGTGCTCCCCTGCCTCACCACCTCCTCTCCGCTCTCCCAGGCTCTTCCTGCAGAGGCCTCTTTC 3283
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3284 TGCCTCCATGGCTATCCATCCACCCACCAAGACCCTGTTCCCTGAGCCTGCATGCCCCTAACCTGCCTTTTCCC 3357
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3358 ATCTCCCCAGCATAACCTAATATTTTTTTTTTTTTTTTGAGACGGAATTTCGCTCTGTCACCCAGACTGGAGTG 3431
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3432 CAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAGGTTCAAGCGATTCTCCTGCCTCCGCCTCCCGAG 3505
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3506 TAGCTGGAATTACAGACGCCTGCCACCACGCACAGCTAACTTTTTTTTTTTTTGTATTTTTAGTAGTGACTGGG 3579
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3580 TTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTATCTCAGCCTCCCAAAGTGC 3653
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3654 TGGGATTACAGGCGTGAGCCACTGGCCCGGCGGCACAACCAAATCTTATTAAACTCACCCTAGGCTGGCCGCGG 3727
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3728 TGACTCATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAGGTGAGAGAATCGCTTGAGCCCAGGAATTCGAGA 3801
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3802 CCAGCCTGGGCCACATGACAAAGCCCCATCTCTACAAAAAAATTACAAAAAAAAAAAAAACAGGTGTGGTGGCA 3875
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3876 TGCACCTGTAGTTGAAGCTACTTGGAAGGATGAAGTGGGAGGATTGCTTGAGCCGGGGAGGTGGAGGCTGCAGT 3949
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3950 GAACTGAGATCACGTCACTGAACTCCAGTCTGAGCAACAGATCGAGACCCTGCCTGAAAATAAATCAATAAATA 4023
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4024 AACTCAACCGAAATGGGTATGAAAGTTGAAATGGGTATGTAAGTTGAAAACCAGAAGTTTTGAGAAACATCCTT 4097
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4098 TGTTAACTTTCATCCTACAAATTGGGTCATTCATGTCCTACGCAGCTAAAACAGAGCCCAGGAGCCAGGGAGGA 4171
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4172 AAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAACTGTGCATTG 4245
Query 754 -------------------------------------------------------- 753
Sbjct 4246 TACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGTAAGTCTTGGA 4301
