Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11440
- Subject:
- NM_011584.4
- Aligned Length:
- 1751
- Identities:
- 1054
- Gaps:
- 550
Alignment
Query 1 ATGGAGGTGAATGCAGGAGGTGTGATTGCCTATATCAGTTCTTCCAGCTCAGCCTCAAGCCCTGCCTCTTGTCA 74
||||||.||||.||||||||||||||||||||.||||||||.||.|||||.|||||.|||||||||||||||||
Sbjct 1 ATGGAGCTGAACGCAGGAGGTGTGATTGCCTACATCAGTTCCTCTAGCTCTGCCTCCAGCCCTGCCTCTTGTCA 74
Query 75 CAGTGAGGGTTCTGAGAATAGTTTCCAGTCCTCCTCCTCTTCTGTTCCATCTTCTCCAAATAGCTCTAATTCTG 148
|||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||.|.||
Sbjct 75 CAGTGAGGGTTCTGAGAATAGCTTCCAGTCCTCGTCCTCGTCTGTTCCATCTTCTCCAAATAGCTCTAACTGTG 148
Query 149 ATACCAATGGTAATCCCAAGAATGGTGATCTCGCCAATATTGAAGGCATCTTGAAGAATGATCGAATAGATTGT 222
||.||||.||.|||||||||||.|.||||.||.|.|..||.||.||..|..||||||.|||.||.|.|||||||
Sbjct 149 ATGCCAACGGCAATCCCAAGAACGCTGATATCTCTAGCATCGATGGTGTTCTGAAGAGTGACCGCACAGATTGT 222
Query 223 TCTATGAAAACAAGCAAATCGAGTGCACCTGGGATGACAAAAAGTCATAGTGGTGTGACAAAATTTAGTGGCAT 296
.||.||||||||.|||||.|.|||||.|||||.|||||.||.|||||.|||||..|||||||||||||||||||
Sbjct 223 CCTGTGAAAACAGGCAAAACCAGTGCTCCTGGCATGACTAAGAGTCACAGTGGAATGACAAAATTTAGTGGCAT 296
Query 297 GGTTCTACTGTGTAAAGTCTGTGGGGATGTGGCGTCAGGATTCCACTATGGAGTTCATGCTTGCGAAGGCTGTA 370
|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 297 GGTTCTACTGTGTAAAGTCTGTGGGGATGTGGCATCAGGATTCCACTATGGAGTTCATGCTTGTGAAGGCTGTA 370
Query 371 AGGGTTTCTTTCGGAGAAGTATTCAACAAAACATCCAGTACAAGAAGTGCCTGAAGAATGAAAACTGTTCTATA 444
||||||||||||||||.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||.||.
Sbjct 371 AGGGTTTCTTTCGGAGGAGCATTCAGCAAAACATCCAGTATAAGAAGTGCCTGAAGAATGAGAACTGTTCCATC 444
Query 445 ATGAGAATGAATAGGAACAGATGTCAGCAATGTCGCTTCAAAAAGTGTCTGTCTGTTGGAATGTCAAGAGATGC 518
|||||.|||||.||||||.|.||.|||||.||.|||||.||.||||||||||||||.||.||||||.|||||||
Sbjct 445 ATGAGGATGAACAGGAACCGGTGCCAGCAGTGCCGCTTTAAGAAGTGTCTGTCTGTGGGGATGTCACGAGATGC 518
Query 519 TGTTCGGTTTGGTCGTATTCCTAAGCGTGAAAAACAGAGGATGCTAATTGAAATGCAAAGTGCAATGAAGACCA 592
||||||.|||||.||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 519 TGTTCGATTTGGCCGAATTCCTAAGCGTGAAAAACAGAGAATGCTAATTGAAATGCAAAGTGCAATGAAGACCA 592
Query 593 TGATGAACAGCCAGTTCAGTGGTCACTTGCAAAATGACACATTAGTAGAACATCATGAACAGACAGCCTTGCCA 666
|||||||||.||||||||||||.|||.||||.||||||||.||||.||||||.|||||.|||.||||..|.|||
Sbjct 593 TGATGAACACCCAGTTCAGTGGCCACCTGCAGAATGACACCTTAGCAGAACAGCATGATCAGTCAGCACTACCA 666
Query 667 GCCCAGGAACAGCTGCGACCCAAGCCCCAACTGGAGCAAGAAAACATCAAAAGCTCTTCTCCTCCATCTTCTGA 740
||.||||||||||||||.||||||.||||.||||||||||||||||||||||.|.|| .|||||||
Sbjct 667 GCTCAGGAACAGCTGCGGCCCAAGTCCCAGCTGGAGCAAGAAAACATCAAAAACACT---------CCTTCTGA 731
Query 741 TTTTGCAAAGGAAGAAGTGATTGGCATGGTGACCAGAGCTCACAAGGATACCTTTATGTATAATCAAGAGCAGC 814
||||||||||||.|||||||||||.||||||||||||||.|||||||||||||||.||||||||||.||.||.|
Sbjct 732 TTTTGCAAAGGAGGAAGTGATTGGTATGGTGACCAGAGCCCACAAGGATACCTTTCTGTATAATCAGGAACATC 805
Query 815 AAGAAAACTCAGCTGAGAGCATGCAGCCCCAGAGAGGAGAACGGATTCCCAAGAACATGGAGCAATATAATTTA 888
.||||||||||.||||||||||||..||.||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 806 GAGAAAACTCATCTGAGAGCATGCCACCTCAGAGAGGAGAACGGATTCCCAGGAACATGGAGCAATATAATTTA 879
Query 889 AATCATGATCATTGCGGCAATGGGCTTAGCAGCCATTTTCCCTGTAGTGAGAGCCAGCAGCATCTCAATGGACA 962
|||||.||.|||.|.||||.||||.||..||.|||.||.||||||||||||||.|||||.|||||||.||||||
Sbjct 880 AATCAAGACCATCGTGGCAGTGGGATTCACAACCACTTCCCCTGTAGTGAGAGGCAGCAACATCTCAGTGGACA 953
Query 963 GTTCAAAGGGAGGAATATAATGCATTACCCAAATGGTCATGCCATTTGTATTGCAAATGGACATTGTATGAACT 1036
||.||||||||||||.|||||||||||||||||.||.||||||.|||||||||||||||||||.||||||||||
Sbjct 954 GTACAAAGGGAGGAACATAATGCATTACCCAAACGGCCATGCCGTTTGTATTGCAAATGGACACTGTATGAACT 1027
Query 1037 TCTCCAATGCTTATACTCAAAGAGTATGTGATAGAGTTCCGATAGATGGATTTTCTCAGAATGAGAACAAGAAT 1110
||||||.||||||||||||||||||.|||||||||.||||..|||.|||||.||||||||.||||||||..|||
Sbjct 1028 TCTCCAGTGCTTATACTCAAAGAGTCTGTGATAGAATTCCAGTAGGTGGATGTTCTCAGACTGAGAACAGAAAT 1101
Query 1111 AGTTACCTGTGCAACACTGGAGGAAGAATGCATCTG--------TA-----CAGTGTTCATAT--------TCA 1163
|||||||||||||||||||||||.||.||||||||| || .|||.|.||||| |||
Sbjct 1102 AGTTACCTGTGCAACACTGGAGGGAGGATGCATCTGGTGTGTCCTATGAGCAAGTCTCCATATGTGGACCCTCA 1175
Query 1164 --------GCCA--------------AAATTTCA-----------CCAAAAACAGCAGTACCACA-------CC 1197
|.|| ||.||||| || ||||||||..|.| ..
Sbjct 1176 GAAGTCTGGACATGAAATCTGGGAAGAATTTTCAATGAGTTTTACCC-----CAGCAGTAAAAGAGGTGGTGGA 1244
Query 1198 ATTTCCAGTTTAAACCATGA--AGTCCTT--------------------------------------------- 1224
||||.|| |.|| |.||||.
Sbjct 1245 ATTTGCA---------AAGAGGATTCCTGGCTTCCGAGATCTGTCTCAGCATGATCAGGTCAATCTGTTAAAAG 1309
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1310 CTGGGACTTTTGAGGTTTTAATGGTACGATTTGCTTCATTATTTGATGCAAAGGAACGGACTGTCACCTTTCTA 1383
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1384 AGTGGTAAGAAGTACAGTGTGGATGACCTGCACTCAATGGGAGCAGGGGATCTGCTCAGCTCTATGTTTGAGTT 1457
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1458 CAGTGAGAAGCTGAATGCCCTCCAGCTCAGTGATGAGGAAATGAGCTTGTTCACAGCAGTTGTTCTGGTATCTG 1531
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1532 CAGATCGATCTGGAATTGAAAATGTCAACTCAGTGGAGGCTTTGCAGGAAACACTCATCCGTGCACTAAGGACC 1605
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1606 TTAATAATGAAAAACCATCCAAATGAGGCCTCCATTTTTACAAAATTACTTCTAAAGTTGCCAGATCTTCGATC 1679
Query 1225 ------------------------------------------------- 1224
Sbjct 1680 TTTAAACAACATGCACTCTGAGGAACTCTTGGCCTTTAAAGTTCATCCT 1728
