Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11444
- Subject:
- XM_017017044.2
- Aligned Length:
- 2237
- Identities:
- 929
- Gaps:
- 1297
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTTTCAAGATTGCAGATGCCGCCTACAGAGACGACAGTCATATTTGAGCCCCGAAGCTCGCGAATGTAG 74
Query 1 -------------------------------ATGGCGGAATCCAGGGGCCGTCTGTACCTTTGGATGTGCTTGG 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAGGCGCCCCAAGCTCGGTCCTCAAGAAGCCATGGCGGAATCCAGGGGCCGTCTGTACCTTTGGATGTGCTTGG 148
Query 44 CTGCTGCGCTGGCATCTTTCCTGATGGGATTTATGGTGGGCTGGTTTATTAAGCCTCTCAAAGAAACAACCACT 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 149 CTGCTGCGCTGGCATCTTTCCTGATGGGATTTATGGTGGGCTGGTTTATTAAGCCTCTCAAAGAAACGACCACT 222
Query 118 TCTGTGCGCTATCATCAAAGTATACGGTGGAAACTGGTATCCGAAATGAAAGCTGAAAACATCAAATCATTTCT 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCTGTGCGCTATCATCAAAGTATACGGTGGAAACTGGTATCCGAAATGAAAGCTGAAAACATCAAATCATTTCT 296
Query 192 TCGTTCTTTTACAAAGCTTCCTCATCTGGCAGGAACAGAACAAAATTTCTTGCTTGCCAAGAAAATCCAAACCC 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCGTTCTTTTACAAAGCTTCCTCATCTGGCAGGAACAGAACAAAATTTCTTGCTTGCCAAGAAAATCCAAACCC 370
Query 266 AGTGGAAGAAATTTGGACTAGATTCAGCCAAGTTGGTTCATTATGATGTCCTCTTATCTTACCCCAATGAGACA 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTGGAAGAAATTTGGACTAGATTCAGCCAAGTTGGTTCATTATGATGTCCTCTTATCTTACCCCAATGAGACA 444
Query 340 AATGCCAACTATATATCGATTGTGGATGAACATGAAACTGAGATTTTCAAAACATCATACCTTGAACCACCACC 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATGCCAACTATATATCGATTGTGGATGAACATGAAACTGAGATTTTCAAAACATCATACCTTGAACCACCACC 518
Query 414 AGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGGAG 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGGAG 592
Query 488 ATCTTGTATATGTGAACTATGCTCGCACTGAAGACTTTTTCAAACTAGAAAGAGAGATGGGCATCAACTGTACT 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCTTGTATATGTGAACTATGCTCGCACTGAAGACTTTTTCAAACTAGAAAGAGAGATGGGCATCAACTGTACT 666
Query 562 GGGAAGATTGTTATTGCAAGATATGGAAAAATCTTCAGAGGAAATAAAGTTAAAAATGCCATGTTAGCAGGAGC 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGAAGATTGTTATTGCAAGATATGGAAAAATCTTCAGAGGAAATAAAGTTAAAAATGCCATGTTAGCAGGAGC 740
Query 636 CATAGGAATCATCTTGTACTCAGATCCAGCTGACTACTTTGCTCCTGAGGTACAGCCATATCCCAAAGGATGGA 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATAGGAATCATCTTGTACTCAGATCCAGCTGACTACTTTGCTCCTGAGGTACAGCCATATCCCAAAGGATGGA 814
Query 710 ATCTTCCTGGAACTGCAGCCCAGAGAGGAAATGTGTTAAATTTGAATGGTGCTGGTGACCCACTCACTCCAGGC 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCTTCCTGGAACTGCAGCCCAGAGAGGAAATGTGTTAAATTTGAATGGTGCTGGTGACCCACTCACTCCAGGC 888
Query 784 TATCCAGCAAAAGAATACACTTTCAGACTTGATGTTGAAGAAGGAGTGGGAATCCCCCGAATACCTGTACATCC 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TATCCAGCAAAAGAATACACTTTCAGACTTGATGTTGAAGAAGGAGTGGGAATCCCCCGAATACCTGTACATCC 962
Query 858 CATTGGATATAATGATGCAGAAATATTATTACGGTA---TAGTTTTCTTGTTGGATATGAGAT---TAAGAT-- 923
||||||||||||||||||||||||||||||||||.| |||..|.|.|||| |||.|.|| |||.||
Sbjct 963 CATTGGATATAATGATGCAGAAATATTATTACGGAAGGTTAGAATGCATGTT---TATAACATCAATAAAATTA 1033
Query 924 -----ATTTTGCAC----TAGTTG--TCTATTTTCTCAT----------------------------------- 951
|||| || |||||| .||| |||.
Sbjct 1034 CAAGGATTT---ACAATGTAGTTGGAACTA-----TCAGAGGATCTGTGGAACCTGACAGGTATGTTATTCTGG 1099
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1100 GAGGTCACCGGGACTCCTGGGTATTTGGAGCTATTGACCCAACCAGTGGGGTTGCTGTTTTGCAAGAAATTGCC 1173
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1174 CGGAGTTTTGGAAAACTGATGAGTAAAGGCTGGAGACCTAGAAGAACTATCATTTTTGCCAGCTGGGATGCAGA 1247
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1248 AGAATTTGGACTTCTGGGTTCCACAGAATGGGCTGAGGAGAATGTCAAAATACTCCAGGAGAGAAGCATTGCTT 1321
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1322 ATATCAACTCGGATTCATCTATAGAAGGCAATTATACTCTCAGAGTTGACTGTACTCCCCTTCTTTACCAATTA 1395
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1396 GTGTATAAACTGACAAAAGAGATCCCCAGCCCTGATGATGGGTTTGAGAGTAAATCACTGTATGAAAGCTGGTT 1469
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1470 GGAAAAAGACCCTTCACCTGAAAATAAAAATTTGCCTAGAATCAATAAGCTGGGATCTGGAAGTGACTTTGAAG 1543
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1544 CTTATTTTCAGAGACTTGGAATTGCTTCAGGCAGAGCCCGTTACACTAAGAATAAGAAAACAGATAAGTACAGC 1617
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1618 AGCTACCCAGTGTACCACACAATTTATGAGACATTTGAATTGGTAGAGAAATTTTATGACCCCACATTTAAAAA 1691
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1692 ACAACTTTCTGTGGCTCAATTACGAGGAGCACTGGTATATGAGCTTGTGGATTCTAAAATCATTCCTTTTAATA 1765
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1766 TTCAAGACTATGCAGAAGCTTTGAAAAACTATGCAGCAAGTATCTATAATCTATCTAAGAAACATGATCAACAA 1839
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1840 TTGACAGACCATGGAGTATCATTTGACTCCTTATTTTCTGCTGTGAAAAACTTCTCAGAGGCTGCTTCAGATTT 1913
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1914 TCATAAACGACTTATACAAGTTGATCTTAACAATCCCATTGCAGTGAGAATGATGAATGACCAACTGATGCTCC 1987
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1988 TGGAAAGAGCATTCATCGATCCTCTTGGTTTACCAGGAAAGCTGTTCTATAGGCACATCATATTTGCTCCAAGT 2061
Query 952 -------------------------------------------------------------------------- 951
Sbjct 2062 AGCCACAACAAATATGCTGGAGAATCATTTCCTGGAATCTATGATGCTATCTTTGATATTGAAAATAAAGCCAA 2135
Query 952 -------------------------------------------------------------------------- 951
Sbjct 2136 CTCTCGTTTGGCCTGGAAAGAAGTAAAGAAACATATTTCTATTGCAGCTTTTACAATTCAAGCAGCAGCAGGAA 2209
Query 952 ----------------- 951
Sbjct 2210 CTCTGAAAGAAGTATTA 2226
