Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11444
- Subject:
- XR_001747711.2
- Aligned Length:
- 1775
- Identities:
- 926
- Gaps:
- 839
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CATAACCTGTTTGAAGGAACTTGAGCTTCAGGGTTACAAAACTGCTTCTGCTATGATGGAGAAGAGGAGGAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATGCTTAGATAAGAGCAATTTAACTTAAATGGAGGAAGTGTGTCTATATTGACAAAAGTCCAAAGACTTGTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCCAGCTAACTGGGCTTTTTACAATGGCTTTTCAAGATTGCAGATGCCGCCTACAGAGACGACAGTCATATTT 222
Query 1 -------------------------------------------------------ATGGCGGAATCCAGGGGCC 19
|||||||||||||||||||
Sbjct 223 GAGCCCCGAAGCTCGCGAATGTAGCAGGCGCCCCAAGCTCGGTCCTCAAGAAGCCATGGCGGAATCCAGGGGCC 296
Query 20 GTCTGTACCTTTGGATGTGCTTGGCTGCTGCGCTGGCATCTTTCCTGATGGGATTTATGGTGGGCTGGTTTATT 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTCTGTACCTTTGGATGTGCTTGGCTGCTGCGCTGGCATCTTTCCTGATGGGATTTATGGTGGGCTGGTTTATT 370
Query 94 AAGCCTCTCAAAGAAACAACCACTTCTGTGCGCTATCATCAAAGTATACGGTGGAAACTGGTATCCGAAATGAA 167
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCCTCTCAAAGAAACGACCACTTCTGTGCGCTATCATCAAAGTATACGGTGGAAACTGGTATCCGAAATGAA 444
Query 168 AGCTGAAAACATCAAATCATTTCTTCGTTCTTTTACAAAGCTTCCTCATCTGGCAGGAACAGAACAAAATTTCT 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCTGAAAACATCAAATCATTTCTTCGTTCTTTTACAAAGCTTCCTCATCTGGCAGGAACAGAACAAAATTTCT 518
Query 242 TGCTTGCCAAGAAAATCCAAACCCAGTGGAAGAAATTTGGACTAGATTCAGCCAAGTTGGTTCATTATGATGTC 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCTTGCCAAGAAAATCCAAACCCAGTGGAAGAAATTTGGACTAGATTCAGCCAAGTTGGTTCATTATGATGTC 592
Query 316 CTCTTATCTTACCCCAATGAGACAAATGCCAACTATATATCGATTGTGGATGAACATGAAACTGAGATTTTCAA 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTTATCTTACCCCAATGAGACAAATGCCAACTATATATCGATTGTGGATGAACATGAAACTGAGATTTTCAA 666
Query 390 AACATCATACCTTGAACCACCACCAGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCT 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AACATCATACCTTGAACCACCACCAGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCT 740
Query 464 CAGCCCAAGGCATGCCAGAGGGAGATCTTGTATATGTGAACTATGCTCGCACTGAAGACTTTTTCAAACTAGAA 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGCCCAAGGCATGCCAGAGGGAGATCTTGTATATGTGAACTATGCTCGCACTGAAGACTTTTTCAAACTAGAA 814
Query 538 AGAGAGATGGGCATCAACTGTACTGGGAAGATTGTTATTGCAAGATATGGAAAAATCTTCAGAGGAAATAAAGT 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAGAGATGGGCATCAACTGTACTGGGAAGATTGTTATTGCAAGATATGGAAAAATCTTCAGAGGAAATAAAGT 888
Query 612 TAAAAATGCCATGTTAGCAGGAGCCATAGGAATCATCTTGTACTCAGATCCAGCTGACTACTTTGCTCCTGAGG 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAAAAATGCCATGTTAGCAGGAGCCATAGGAATCATCTTGTACTCAGATCCAGCTGACTACTTTGCTCCTGAGG 962
Query 686 TACAGCCATATCCCAAAGGATGGAATCTTCCTGGAACTGCAGCCCAGAGAGGAAATGTGTTAAATTTGAATGGT 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TACAGCCATATCCCAAAGGATGGAATCTTCCTGGAACTGCAGCCCAGAGAGGAAATGTGTTAAATTTGAATGGT 1036
Query 760 GCTGGTGACCCACTCACTCCAGGCTATCCAGCAAAAGAATACACTTTCAGACTTGATGTTGAAGAAGGAGTGGG 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCTGGTGACCCACTCACTCCAGGCTATCCAGCAAAAGAATACACTTTCAGACTTGATGTTGAAGAAGGAGTGGG 1110
Query 834 AATCCCCCGAATACCTGTACATCCCATTGGATATAATGATGCAGAAATATTATTACGGTATAGTTTTCTTG--- 904
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|| ||||
Sbjct 1111 AATCCCCCGAATACCTGTACATCCCATTGGATATAATGATGCAGAAATATTATTACGCTA-------CTTGGGA 1177
Query 905 ----TTG--------GATATGAGAT------------------TAAGATATTTTGCACTAGT--------TGTC 940
||| ||||.|||.| |.||.|| |||| ||.|
Sbjct 1178 GGAATTGCTCCACCAGATAAGAGTTGGAAGGGAGCCCTTAATGTGAGTTA--------TAGTATCGGACCTGGC 1243
Query 941 T------------ATTTTCTCAT--------------------------------------------------- 951
| |||.|.|||.
Sbjct 1244 TTTACAGGGAGTGATTCTTTCAGGAAGGTTAGAATGCATGTTTATAACATCAATAAAATTACAAGGATTTACAA 1317
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1318 TGTAGTTGGAACTATCAGAGGATCTGTGGAACCTGGTATGTTATTCTGGGAGGTCACCGGGACTCCTGGGTATT 1391
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1392 TGGAGCTATTGACCCAACCAGTGGGGTTGCTGTTTTGCAAGAAATTGCCCGGAGTTTTGGAAAACTGATGAGTA 1465
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1466 AAGGCTGGAGACCTAGAAGAACTATCATTTTTGCCAGCTGGGATGCAGAAGAATTTGGACTTCTGGGTTCCACA 1539
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1540 GAATGGGCTGAGGAGAATGTCAAAATACTCCAGGAGAGAAGCATTGCTTATATCAACTCGGATTCATCTATAGA 1613
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1614 AGGCAATTATACTCTCAGAGTTGACTGTACTCCCCTTCTTTACCAATTAGTGTATAAACTGACAAAAGAGATCC 1687
Query 952 ------------------------------------------------------------------------- 951
Sbjct 1688 CCAGCCCTGATGATGGGTTTGAGAGTAAATCACTGTATGAAAGCTGGTTGGAAAAAGACCCTTCACCTGAAAA 1760
