Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11450
- Subject:
- XR_925998.1
- Aligned Length:
- 1768
- Identities:
- 913
- Gaps:
- 854
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAAAGAGCTTAGAATATTTATTTGAAAGGAATGAGGATCCTGCACTCTTCCTCCCTCAGTAAGTAAATGCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCCTAGGAAGAGAGAACCAAAATGTCTACCGGACCAGATGTCAAGGCTACAGTGGGGGACATTTCCAGTGATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAATTTAAACGTGGCTCAAGAGGAATGCTCCAGGAAAGGTTTTTGTTCAGTCCGACATGGGCTGGCCCTCATC 222
Query 1 ------------------------------------ATGAACTTGAGCATTGCCATCCCAGCTATGGTGAACAA 38
||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGCAGCTCTGTAATTTTTCAATTTACACCCAACAAATGAACTTGAGCATTGCCATCCCAGCTATGGTGAACAA 296
Query 39 CACAGCCCCACCTAGCCAGCCCAATGCCTCCACAGAACGGCCCTCCACTGACTCCCAGGGCTACTGGAATGAAA 112
|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CACAGCCCCACCTAGCCAGCCCAATGCTTCCACAGAACGGCCCTCCACTGACTCCCAGGGCTACTGGAATGAAA 370
Query 113 CTCTAAAAGAATTTAAAGCAATGGCCCCTGCATATGACTGGAGTCCTGAAATCCAGGGAATCATCCTCAGCTCC 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCTAAAAGAATTTAAAGCAATGGCCCCTGCATATGACTGGAGTCCTGAAATCCAGGGAATCATCCTCAGCTCC 444
Query 187 CTCAACTATGGCTCATTCTTGGCTCCAATCCCCAGTGGCTATGTGGCTGGAATATTTGGAGCCAAGTATGTGGT 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCAACTATGGCTCATTCTTGGCTCCAATCCCCAGTGGCTATGTGGCTGGAATATTTGGAGCCAAGTATGTGGT 518
Query 261 TGGTGCTGGCTTGTTTATTTCCTCATTCCTGACCCTCTTCATTCCACTGGCAGCTAATGCGGGAGTGGCCTTGC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGTGCTGGCTTGTTTATTTCCTCATTCCTGACCCTCTTCATTCCACTGGCAGCTAATGCGGGAGTGGCCTTGC 592
Query 335 TCATTGTCCTCCGGATTGTACAAGGCATAGCCCAGGTTATGGTATTAACTGGTCAGTATTCAATTTGGGTCAAA 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCATTGTCCTCCGGATTGTACAAGGCATAGCCCAGGTTATGGTATTAACTGGTCAGTATTCAATTTGGGTCAAA 666
Query 409 TGGGCTCCCCCACTGGAAAGGAGTCAACTCACCACCATTGCTGGATCAGGGTCAATGCTGGGGTCCTTCATTGT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGGCTCCCCCACTGGAAAGGAGTCAACTCACCACCATTGCTGGATCAGGGTCAATGCTGGGGTCCTTCATTGT 740
Query 483 TCTACTTGCTGGTGGTCTCCTCTGCCAGACCATAGGATGGCCTTACGTCTTCTATATCTTTGGAGGAATTGGCT 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTACTTGCTGGTGGTCTCCTCTGCCAGACCATAGGATGGCCTTACGTCTTCTATATCTTTGGAGGAATTGGCT 814
Query 557 GTGCTTGTTGTCCTCTCTGGTTTCCTCTCATTTATGATGATCCTGTGAATCATCCCTTTATCAGTGCTGGTGAG 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGCTTGTTGTCCTCTCTGGTTTCCTCTCATTTATGATGATCCTGTGAATCATCCCTTTATCAGTGCTGGTGAG 888
Query 631 AAGAGATACATTGTGTGTTCATTGGCTCAGCAGGACTGTTCACCAGGCTGGTCTCTTCCCATTAGGGCTATGAT 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGAGATACATTGTGTGTTCATTGGCTCAGCAGGACTGTTCACCAGGCTGGTCTCTTCCCATTAGGGCTATGAT 962
Query 705 CAAATCCTTACCACTCTGGGCCATTTTAGTCTCTTATTTCTGTGAATACTGGCTTTTTTATACCATTATGGCGT 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAAATCCTTACCACTCTGGGCCATTTTAGTCTCTTATTTCTGTGAATACTGGCTTTTTTATACCATTATGGCGT 1036
Query 779 ACACACCAACGTACATCAGCTCGGTACTTCAAGCCAACCTCAGAGAT--------------------------- 825
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACACACCAACGTACATCAGCTCGGTACTTCAAGCCAACCTCAGAGATGTTTTTGCCAATTAATATGTCATGGAA 1110
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1111 ATCTTCATATCAGTACATGAGAACCTTGCTGAGCAGTATTTGGATTGTTTCCCATCTTTGAGCAATGCTGCAGT 1184
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1185 GAAAACCTTGTTCATTTCTCATACCTTTGTGCAACCCTCTGTGGAGTAAATTTCTGCATATGAGATTATTGAGT 1258
Query 826 ------AGTGGGATCCTGTCTGCCTTGCCGTTTGTTGTTGGATGTATCTGCATTATCCTTGGAGGTCTACTGGC 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CAAAGGAGTGGGATCCTGTCTGCCTTGCCGTTTGTTGTTGGATGTATCTGCATTATCCTTGGAGGTCTACTGGC 1332
Query 894 AGACTTTCTTCTCTCCAGAAAAATCCTCAGACTCATCACCATCAGGAAACTCTTCACTACCATTGGGGTTCTCT 967
|||||||||||||||||||||
Sbjct 1333 AGACTTTCTTCTCTCCAGAAA----------------------------------------------------- 1353
Query 968 TCCCATCCGTGATCCTCGTGTCCCTGCCCTGGGTCAGATCCAGCCACAGCATGACCATGACCTTCTTGGTGCTG 1041
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1042 TCTTCTGCCATCAGCAGCTTCTGTGAATCAGGAGCCCTTGTTAACTTCTTGGATATTGCTCCTCGGTACACTGG 1115
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1116 CTTTCTCAAAGGACTATTGCAAGTCTTTGCACACATAGCTGGAGCCATCTCTCCTACTGCTGCTGGATTTTTCA 1189
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1190 TCAGTCAGGATTCAGAGTTTGGTTGGAGAAATGTCTTCTTGCTTTCAGCTGCTGTTAACATATCGGGCCTGGTT 1263
Sbjct 1354 -------------------------------------------------------------------------- 1353
Query 1264 TTCTACCTCATCTTTGGCCGAGCAGATGTGCAGGACTGGGCTAAAGAGCAGACATTCACCCACCTC 1329
Sbjct 1354 ------------------------------------------------------------------ 1353
