Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11524
- Subject:
- XM_006526807.3
- Aligned Length:
- 3534
- Identities:
- 626
- Gaps:
- 2835
Alignment
Query 1 ATGAGTTCTGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGACATGGATCCTACAAAAATCTGCACTGGGAAGGGAGCGGTGACTCTCCGGGCCTCGTCTTCCTACAGGGAAA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGATGAGTGGAGGCTTTCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTGTGCATCCCAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGTTGTCCCTCTCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCTGGTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCTGGGGCCTCTTGGCTGCGTC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGACTCTAGATGATTTCATTCCCCCTCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCTGCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCCAGACGCCAC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGCCCCGGAGGACCTCCGCAGAGTCTCGGAGCCTGACCTC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ACGGGAGCTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATGAAGTTTCTTCTTCCCTTATTGGAACTGATTC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CCAAGCCTTTCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACGATTGTCAATCCTACTATTGTGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAAAGAAGAGTGGGA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAGAGCAAAGGATGA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 ACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGAACAGAGATGATGATTCA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GATCTGTACTCTCCCAGATACTCATTTTCTGAAGACACAAAATCTCCCCTTTCTGTGCCTCGCTCAAAAAGTGA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GATGAGCTACATTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACTACCCCTCCCAGCCCGCTCTTCCTCAC 1258
||||.||||||.||.||.|||||.||.||.||||||||.||||||||.||.||||||||||||||.|||||||
Sbjct 1 -ATGAACTACATCGAAGGGGAGAAAGTGGTTAAGAGGTCCGCCACACTCCCGCTCCCAGCCCGCTCCTCCTCAC 73
Query 1259 TGAAGTCAAGCTCAGAAAGAAATGACTGGGAACCCCCAGATAAGAAAGTAGACACAAGAAAATATCGTGCAGAG 1332
|.|||||.|||.|.||||||||.||||||||.|||||||||||||||||.||.||.||||||||.||.||||||
Sbjct 74 TCAAGTCCAGCCCGGAAAGAAACGACTGGGAGCCCCCAGATAAGAAAGTGGATACGAGAAAATACCGAGCAGAG 147
Query 1333 CCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCTCAGCCATCAG 1406
|||||.||||||||||||||||||||.|||||||||||.||.||||||||.||.||||||||||||||..||||
Sbjct 148 CCCAAAAGCATTTACGAATATCAGCCGGGCAAGTCTTCGGTCCTGACCAATGAGAAGATGAGCTCAGCAGTCAG 221
Query 1407 CCCTACTCCGGAAATTTCTTCAGAGACTCCTGGATATATATATTCTTCCAACTTCCATGCAGTGAAGAGGGAAT 1480
|||.|||||.||.|||.|.||||||.|||||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 222 CCCGACTCCAGACATTACGTCAGAGCCTCCTGGATATATCTATTCTTCCAACTTCCATGCAGTGAAGAGAGAAT 295
Query 1481 CAGACGGGGCTCCTGGGGATCTCACTAGCTTGGAGAATGAGAGACAAATTTATAAAAGTGTCTTGGAAGGTGGT 1554
|.||||||.|.||.||||.||||.|||||||||||||||||||.||.||.|||||.|||||||||||||||||.
Sbjct 296 CGGACGGGACCCCCGGGGGTCTCGCTAGCTTGGAGAATGAGAGGCAGATCTATAAGAGTGTCTTGGAAGGTGGC 369
Query 1555 GACATCCCTCTTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCCACTAAAGATTCAGAATCGCC 1628
||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||.||.||
Sbjct 370 GACATCCCTCTTCAGGGCCTCAGTGGGCTCAAGCGACCTTCCAGCTCAGCTTCCACTAAAGATTCAGAGTCACC 443
Query 1629 AAGACATTTTATACCAGCTGATTACTTGGAATCCACGGAAGAATTTATTCGAAGACGTCATGATGATAAAGAGA 1702
||||||||||||||||||||||||||||||.|||||.||||||||||||||.|||||.||.|||||||||||||
Sbjct 444 AAGACATTTTATACCAGCTGATTACTTGGAGTCCACAGAAGAATTTATTCGGAGACGGCACGATGATAAAGAGA 517
Query 1703 AACTTTTAGCGGACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGGC 1776
||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||.
Sbjct 518 AACTTTTAGCGGACCAGAGACGACTTAAGCGCGAGCAAGAAGAGGCCGATATTGCAGCTCGCCGCCACACAGGT 591
Query 1777 GTCATTCCGACGCACCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGACGATACTGCAAA 1850
|||||.|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.||.||
Sbjct 592 GTCATCCCGACTCATCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGATGATACGGCCAA 665
Query 1851 AAGGAAATCTGGGTCAGAG------------------AAATATGACT-----GGGCA----------------- 1884
||||||||||||||.|||| ||||.||||| |..||
Sbjct 666 AAGGAAATCTGGGTTAGAGATGAGACCTGCTCGAGCCAAATTTGACTTTAAAGCCCAGACCCTGAAGGAGCTGC 739
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 740 CTCTGCAGAAGGGAGACGTTGTTTACATCTACAGACAGATTGACCAGAACTGGTATGAAGGTGAACACCATGGC 813
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 814 CGGGTGGGAATCTTCCCACGCACCTATATCGAGCTTCTTCCTCCAGCTGAGAAGGCTCAGCCCAGAAAGTTGGC 887
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 888 ACCCGTACAAGTTTTGGAATATGGAGAAGCCATTGCGAAGTTTAACTTTAATGGAGATACACAAGTAGAAATGT 961
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 962 CTTTCCGAAAGGGGGAGAGGATCACGCTGCTCCGACAGGTGGATGAGAACTGGTACGAAGGGAGGATTCCTGGG 1035
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1036 ACATCTCGCCAAGGCATTTTCCCTATCACCTATGTAGATGTGCTTAAGAGGCCATTGGTGAAAACCCCTGTGGA 1109
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1110 TTACATCGACCTGCCTTATTCTTCTTCCCCAAGTCGCAGTGCCACTGTGAGCCCACAGTATACTAGTCACAGCA 1183
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1184 AGCTCATCATGCCAGCCCCTTCATCTCTACCCCACCCCCGCCGAGCCCTGTCCCCTGAGATGCACGCCATCACC 1257
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1258 TCCGAGTGGATCTCTCTGACTGTCGGGGTCCCAGGCAGGCGTTCTCTGGCCATGACACCACCCTTGCCTCCTCT 1331
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1332 GCCTGAGGCTTCTGTCTATGACATGGACCGCCTGGCCTTGTCAGCAAGGGCCCGTCCCTCCTTGCCTCTCAGCC 1405
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1406 TCCCCTATTCAAGTTGGTCAGATCACTCCACCCTGCGCCCAGTGGTCTCCCCGATGGCCCTGCCTCCACCCCAC 1479
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1480 AAAGCCTACTCACTGGCACCCAGTGTCCAGGCTCCTCTTCACGTCAATGGAGATGGTGGTATTCACATTCGCCA 1553
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1554 AGATGGCTTCTCCCAGCCACCACCTGGGAACTCTGATAGGGTCATCTCAGAGCTTAGTGACGCCTTTAGCAGCC 1627
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1628 AGAGCAAGAGACAGCCCTGGCGAGAAGATGGACCATATGACAGGAAAGCAGAGAGCGAGGCAGGTGAGAGATAC 1701
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1702 CCTGGTGGACCCAAGATCTCTAAGAAGAGCTGCTTGAAACCTTCAGACGTGGTCAGGTGCCTGAGTTCTGAGCA 1775
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1776 GAGACTCTCAGAGTTCCACACTCCTGAGGACAGTCAGTCCTGCAAGCCCCTGGGTGGCCCTTTCCCAGCCTGGG 1849
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1850 AGACTGGGCCACCAGAGCTGCACAGAGCTGTCGAGGCTGACAGGAAGGCTGCTCAGAGTGGTGTGAGCCAGCCT 1923
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1924 TCTCATCATTCATTGAGCGCAGGACCTGATCTCACAGAATCTGAAAAGAACTATGTGGAAGCGGTTTGCAATGA 1997
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1998 GATCATAAACATTGCGGAGAAATCTGTTCATTACTGCAGCACTGTCTCTCATCCCCTTGACTTCCATCACAAGG 2071
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2072 TACCCCCTTCTGACAATAAATCATCTTTAATCATTTCTCAGCAACCTCAAGCCCAGCAGCGAAGAGTCACCCCA 2145
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2146 GACAGGAGTCAGCCCTCACTGGATTTGTGTAGCTACCAAGCGTTATATAGTTATGTGCCACAGAACGATGATGA 2219
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2220 GTTGGAACTCCGAGATGGAGATATTGTTGATGTCATGGAAAAATGTGACGATGGATGGTTTGTTGGCACTTCGA 2293
Query 1885 -------------------------------------------------------- 1884
Sbjct 2294 GAAGGACGAGGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAACCTTTATATCTA 2349
