Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11582
- Subject:
- XM_017026217.1
- Aligned Length:
- 2066
- Identities:
- 1134
- Gaps:
- 778
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAACAACCCCATGACGAGAAGGACCCAGCCTCCAAGCGGCCACACCCTGTGTGTCTCTTTGTCCTGCCGGC 74
Query 1 -------------------------------------------------ATGACGCCCGCCCTCACAGCCCTGC 25
||||..|||.||.||||.||.||||
Sbjct 75 ACTGAGGACTCATCCATCTGCACAGCTGGGGCCCCTGGGAGGAGACGCCATGATCCCCACCTTCACGGCTCTGC 148
Query 26 TCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCT 99
|||||||.|||||||||||||||||||||||||.|.||||||||||||||.|||||||||||||||||||||||
Sbjct 149 TCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCCACATGCAGGCAGGGCCCCTCCCCAAACCCACCCTCTGGGCT 222
Query 100 GAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTA 173
||||||||||||||||||||||||||||.|.|.||||||||||||||||||||||.|||||||||.|.||||||
Sbjct 223 GAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTCAGGGGACCCTGGAGGCTCGGGAGTA 296
Query 174 CCGACTGGATAAAGAGGGAAGCCCAGAGCCCTTGGACAGAAATAACCCACTGGAACCCAAGAACAAGGCCAGAT 247
|||.|||||||||||||.||||||||..||||.|||||||.|.|||||||||||.|||||||||||||||||||
Sbjct 297 CCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAGAACAAGGCCAGAT 370
Query 248 TCTCCATCCCATCCATGACAGAGCACCATGCGGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCA 321
|||||||||||||||||||||||.||.||||.||||||||||||||..|||||..||||.|||.||||||||||
Sbjct 371 TCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTACTATCGCAGCCCTGTAGGCTGGTCA 444
Query 322 GAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCC 395
.|||||||.|||||||||||||||||||||||||||..|||||..|||||||||||.|||||||||||.||.||
Sbjct 445 CAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAACCCACCCTTTCAGCCCTGCCGAGTCC 518
Query 396 TGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGA 469
|
Sbjct 519 T------------------------------------------------------------------------- 519
Query 470 AGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTC 543
Sbjct 520 -------------------------------------------------------------------------- 519
Query 544 CCTGTGGGCCCCGTGAACCCCAGCCACAGGTGGAGGTTCACATGCTATTACTATTATATGAACACCCCCCAGGT 617
Sbjct 520 -------------------------------------------------------------------------- 519
Query 618 GTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGC 691
Sbjct 520 -------------------------------------------------------------------------- 519
Query 692 AGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTT 765
Sbjct 520 -------------------------------------------------------------------------- 519
Query 766 CTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAA 839
|||
Sbjct 520 -----------------------CTT------------------------------------------------ 522
Query 840 CTTCACCCTGGGCCCTGTGAGCCGCTCCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCG 913
Sbjct 523 -------------------------------------------------------------------------- 522
Query 914 AGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCA 987
Sbjct 523 -------------------------------------------------------------------------- 522
Query 988 CAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTT 1061
|||.||||||||.|||.||||||||||||||||||||||.||.|.|...|.||||||||
Sbjct 523 ---------------GTGACCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGGACACTTT 581
Query 1062 CCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGG 1135
.|||||||.|||.||..|||||||||||||||.|||||.||||||||||..|.||||||||||..||.||||||
Sbjct 582 TCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGG 655
Query 1136 CTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAAC 1209
||||||||||||||||||||||||||||||..||||.|||||||||||||||||.|.|||||.||.|||.|..|
Sbjct 656 CTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCC 729
Query 1210 CCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCC 1282
|.|.||||||||||...|||||||||.||||||||.|||||.|||||||||..|| ||||||.| ||||.|.|.
Sbjct 730 CACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCT 802
Query 1283 CACCCACAGGGCC--------------GCCCT-----------------------------------CCACACC 1307
||||||||.||.| ||||| ||||| .
Sbjct 803 CACCCACAAGGTCCGTCTCAACAGCTGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACA-G 875
Query 1308 TGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCCTCT 1381
|||||||.||||..||..||||||..||||.|||||||.|||||.||.|.|||||||.||||.|||||||||||
Sbjct 876 TGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCTCTCCCTCCTCCTCT 949
Query 1382 TCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGTCCT 1455
||||||||||||.||....||||||..|.|||||||||||||..|.|||||||.||.||||||||||.||||||
Sbjct 950 TCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACGTCCT 1023
Query 1456 GCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGA 1529
.||||||||||.|||.||||||||||||||.|||||||.|.||||||||||||||||||||||||||||||||.
Sbjct 1024 CCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGG 1097
Query 1530 AGAAAACCTCTATGCTGCCGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCCACACG 1603
|||||||.|||.|||||||||||||.||||||||.||||||||.|||||||..||||||.||.|||||||||||
Sbjct 1098 AGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGAGCCCACACG 1171
Query 1604 ATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCC 1677
|||||||||||||||||||||||||||||..|||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1172 ATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCC 1245
Query 1678 TCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGC 1751
|||.|||||||||||||||||||||||||||||||||||||||..|||||||||||.|||||||||||||||||
Sbjct 1246 TCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGACACTGAGGC 1319
Query 1752 TGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTG 1825
||||||||||||||||.|||||||||||||||||||||.||||||||||||.|||||.||||.|||||||||||
Sbjct 1320 TGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGAAGGCAACTG 1393
Query 1826 AGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCAC 1893
||||||||||||||||||||||||...||||||||||||||||..||||.||||||||||||||||||
Sbjct 1394 AGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCAC 1461
