Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11611
- Subject:
- XM_011240286.1
- Aligned Length:
- 1506
- Identities:
- 692
- Gaps:
- 750
Alignment
Query 1 ATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCACCTGGAGGAGAAGGACCTGAAGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCTTCGAACAGTTTGGTCGGATCTTTGAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGAT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTGCCTTCCTGACATACTGTGCCCGGGATTCAGCCCTGAAGGCCCAGAGCGCCCTGCACGAACAGAAGACGCTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCAGGGATGAACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGCCGAGGAGAAGACCGGAAGCTCTTTGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGGGATGCTAGGGAAGCAGCAGACAGATGAGGACGTCCGGAAGATGTTTGAGCCCTTCGGGACCATCGACGAGT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCACTGTGCTCCGGGGGCCAGATGGCACCAGCAAAGGCTGCGCCTTCGTGAAGTTCCAGACCCACGCTGAGGCC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGGCGGCCATCAACACCCTTCACAGCAGCCGGACCCTGCCAGGTGCCTCGTCCAGCCTGGTGGTGAAGTTTGC 518
.||.
Sbjct 1 ----------------------------------------------------------------------ATGG 4
Query 519 TGACACTGAGAAGGAGCGA--------GGTCTCCGCCGCATGCAGCAGGT-------GGCCACCCAGTTGGGCA 577
|||||.|||..||| |.|| || |||||.|||| ||||| .||..||||
Sbjct 5 TGACAGTGACCAGG-GGGAAACCATGGGG-----------TGCAGGAGGTGCTCAGGGGCCA--GAGAAGGGC- 63
Query 578 TGTTCAGCCCCA-TC-ACCCTCCAGTTTGGAGCCTACAGCGCCTACACCCAGGCCCTGA-------TGCAGCAG 642
.|||.||.||| || .|||.||| ||| ||||| |||.|| ||||
Sbjct 64 -CTTCTGCTCCACTCTGCCCCCCA--------CCT----------CACCC---CCCAGATTTTCTCTGCA---- 111
Query 643 CAGGCGGCCCTGGTAGCGGCTCACAGTGCCTACCTCAGCCCCATGGCCACCATGGCTGCCGTGCAGATGCAGCA 716
||...||||||.|||| .||||..||
Sbjct 112 --------------------TCTGTGTGCCTGCCTC------------------TCTGCTCTG----------- 136
Query 717 CATGGCTGCCATCAATGCCAATGGCCTCATCGCCACCCCCATCACCCCATCCTCAGGAACCAGCACCCCTCCTG 790
|.||||.| |||..|| ||.|||| ||||||||||||||||||||
Sbjct 137 --TTGCTGTC----------ATGTTCT-------------------CCTTCCT-AGGAACCAGCACCCCTCCTG 178
Query 791 CCATCGCTGCCACGCCTGTCTCTGCCATTCCGGCTGCCCTGGGCGTCAACGGCTACAGCCAGGTGCCCACCCAG 864
||||.|||||||||||.|||||||||||.||.||||||.|||||||||||||||||||||.|||||||||||||
Sbjct 179 CCATTGCTGCCACGCCCGTCTCTGCCATCCCTGCTGCCTTGGGCGTCAACGGCTACAGCCCGGTGCCCACCCAG 252
Query 865 CCCACTGGGCAGCCTGCCCCTGATGCTCTGTATCCCAACGGGGTTCACCCCTACC------------------- 919
||.||.||||||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 253 CCTACAGGGCAGCCTGCCCCGGATGCTCTGTATCCCAACGGGGTTCACCCTTACCCAGATGAGGCTCTGTCTGC 326
Query 920 -----------------------------------------------------------------CAGCCCAGA 928
|||||||||
Sbjct 327 TGAGAGAAGTGCTGGCGGGGTTCCCATAATGTCCCAGGCCCACTCATGGCTTGTGATGCTCTCTGCAGCCCAGA 400
Query 929 GCCCCGCGGCCCCCGTGGACCCCCTGCAGCAGGCCTACGCGGGGATGCAGCACTACA---CAGCCTACCCAGCA 999
||||.||.||||||||||||||.||.|||||||||||.||.||.||||||||||||| ||||.|||||.|||
Sbjct 401 GCCCGGCAGCCCCCGTGGACCCTCTCCAGCAGGCCTATGCAGGAATGCAGCACTACACAGCAGCGTACCCCGCA 474
Query 1000 GCCTACAGCCTGGTTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCA 1073
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 475 GCCTACAGCCTGGTTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTTGCCCAGCAGCCCCCACCACCACCTCA 548
Query 1074 ACAGCAGCAGCAGCAGCAGCAGCAGCAACAG---CAGCAGCAGCAAAGAGAAGGCCCTGATGGCTGCAACATCT 1144
.||.||||||||||||||||||||||||||| ||||||||||||.|.|||||||||||||||||||||||||
Sbjct 549 GCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAACGGGAAGGCCCTGATGGCTGCAACATCT 622
Query 1145 TCATCTACCACCTGCCCCAGGAGTTCACTGACTCAGAGATCCTCCAGATGTTTGTCCCCTTTGGCCACGTCATC 1218
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.||||||
Sbjct 623 TCATCTACCACCTGCCCCAGGAGTTCACAGACTCAGAGATCCTCCAGATGTTTGTCCCTTTTGGTCATGTCATC 696
Query 1219 TCAGCCAAAGTCTTTGTTGACCGAGCCACCAATCAAAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGC 1292
|||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 697 TCAGCCAAAGTCTTTGTTGACCGGGCCACCAATCAGAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGC 770
Query 1293 CAGTGCCCAGGCTGCCATCCAGGCCATGAATGGCTTCCAGATCGGCATGAAGCGCCTCAAAGTCCAGCTAAAGC 1366
||||||||||||||||||||||||.|||||.||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 771 CAGTGCCCAGGCTGCCATCCAGGCTATGAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAGCTAAAGC 844
Query 1367 GGCCTAAGGATGCCAACCGGCCCTAC 1392
|||||||||||||.|||.||||||||
Sbjct 845 GGCCTAAGGATGCAAACAGGCCCTAC 870
