Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11612
- Subject:
- XM_005258192.4
- Aligned Length:
- 2220
- Identities:
- 1127
- Gaps:
- 1092
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGAAGCTGGGGGTGGAGCCGGAGGAGGAAGGCGGCGGCGACGACGACGAGGAAGACGCCGAGGCCTGGGC 74
Query 1 -ATGGAACTGGCGGACGTGGGGGCGGCAGCCAGCTCGCAGGGAGTTCATGATCAAGTGTTGCCCACACCAAATG 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGAACTGGCGGACGTGGGGGCGGCAGCCAGCTCGCAGGGAGTTCATGATCAAGTGTTGCCCACACCAAATG 148
Query 74 CTTCATCCAGAGTCATAGTACATGTGGATCTGGATTGCTTTTATGCACAAGTAGAAATGATCTCAAATCCAGAG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTTCATCCAGAGTCATAGTACATGTGGATCTGGATTGCTTTTATGCACAAGTAGAAATGATCTCAAATCCAGAG 222
Query 148 CTAAAAGACAAACCTTTAGGGGTTCAACAGAAATATTTGGTGGTTACCTGCAACTATGAAGCTAGGAAACTTGG 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTAAAAGACAAACCTTTAGGGGTTCAACAGAAATATTTGGTGGTTACCTGCAACTATGAAGCTAGGAAACTTGG 296
Query 222 AGTTAAGAAACTTATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGTTGGTATTAGTTAATGGAGAAGACC 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGTTAAGAAACTTATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGTTGGTATTAGTTAATGGAGAAGACC 370
Query 296 TGACCCGCTACAGAGAAATGTCTTATAAGGTTACAGAATTACTGGAAGAATTTAGTCCAGTTGTTGAGAGACTT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGACCCGCTACAGAGAAATGTCTTATAAGGTTACAGAATTACTGGAAGAATTTAGTCCAGTTGTTGAGAGACTT 444
Query 370 GGATTTGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGAGACTACAGCAGCTGCAAAGTGATGAACT 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGATTTGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGAGACTACAGCAGCTGCAAAGTGATGAACT 518
Query 444 TTCTGCGGTGACTGTGTCGGGTCATGTATACAATAATCAGTCTATAAACCTGCTTGACGTCTTGCACATCAGAC 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCTGCGGTGACTGTGTCGGGTCATGTATACAATAATCAGTCTATAAACCTGCTTGACGTCTTGCACATCAGAC 592
Query 518 TACTTGTTGGATCTCAGATTGCAGCAGAGATGCGGGAAGCCATGTATAATCAGTTGGGGCTCACTGGCTGTGCT 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TACTTGTTGGATCTCAGATTGCAGCAGAGATGCGGGAAGCCATGTATAATCAGTTGGGGCTCACTGGCTGTGCT 666
Query 592 GGAGTGGCTTCTAATAAACTGTTGGCAAAATTAGTTTCTGGTGTCTTTAAACCAAATCAACAAACAGTCTTATT 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGAGTGGCTTCTAATAAACTGTTGGCAAAATTAGTTTCTGGTGTCTTTAAACCAAATCAACAAACAGTCTTATT 740
Query 666 ACCTGAAAGTTGTCAACATCTTATTCATAGTTTGAATCACATAAAGGAAATACCTGGTATTGGCTATAAAACTG 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCTGAAAGTTGTCAACATCTTATTCATAGTTTGAATCACATAAAGGAAATACCTGGTATTGGCTATAAAACTG 814
Query 740 CCAAATGTCTTGAAGCACTGGGTATCAATAGTGTGCGTGATCTCCAAACCTTTTCACCCAAAATTTTAGAAAAA 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCAAATGTCTTGAAGCACTGGGTATCAATAGTGTGCGTGATCTCCAAACCTTTTCACCCAAAATTTTAGAAAAA 888
Query 814 GAATTAGGAATTTCAGTTGCTCAGCGTATCCAAAAGCTCAGTTTTGGAGAGGATAACTCCCCTGTGATACTCTC 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAATTAGGAATTTCAGTTGCTCAGCGTATCCAAAAGCTCAGTTTTGGAGAGGATAACTCCCCTGTGATACTCTC 962
Query 888 AGGACCACCTCAGTCCTTTAGTGAAGAAGATTCATTTAAAAAATGTTCATCTGAAGTTGAAGCTAAAAATAAGA 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGACCACCTCAGTCCTTTAGTGAAGAAGATTCATTTAAAAAATGTTCATCTGAAGTTGAAGCTAAAAATAAGA 1036
Query 962 TTGAAGAACTACTTGCTAGTCTTTTAAACAGAGTATGCCAAGATGGAAGGAAGCCTCATACAGTGAGATTAATA 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTGAAGAACTACTTGCTAGTCTTTTAAACAGAGTATGCCAAGATGGAAGGAAGCCTCATACAGTGAGATTAATA 1110
Query 1036 ATCCGTCGGTATTCCTCTGAGAAGCACTATGGTCGTGAGAGTCGTCAGTGCCCTATTCCTTCACATGTAATTCA 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCCGTCGGTATTCCTCTGAGAAGCACTATGGTCGTGAGAGTCGTCAGTGCCCTATTCCTTCACATGTAATTCA 1184
Query 1110 GAAATTAGGGACAGGAAATTATGATGTGATGACCCCAATGGTTGATATACTTATGAAACTTTTTCGAAATATGG 1183
|||||||||||||| ||.||
Sbjct 1185 GAAATTAGGGACAG--AACTA----------------------------------------------------- 1203
Query 1184 TGAATGTGAAGATGCCATTTCACCTTACCCTTCTAAGTGTGTGCTTCTGCAACCTTAAAGCACTAAATACTGCT 1257
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1258 AAGAAAGGGCTTATTGATTATTATTTAATGCCATCATTATCAACTACTTCACGCTCTGGCAAGCACAGTTTTAA 1331
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1332 AATGAAAGACACTCATATGGAAGATTTTCCCAAAGACAAAGAAACAAACCGGGATTTCCTACCAAGTGGAAGAA 1405
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1406 TTGAAAGTACAAGAACTAGGGAGTCTCCACTAGATACCACAAATTTTTCTAAAGAAAAAGACATTAATGAATTC 1479
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1480 CCACTCTGTTCACTTCCTGAAGGTGTTGACCAAGAAGTCTTCAAGCAGCTTCCAGTAGATATTCAAGAAGAAAT 1553
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1554 CCTTTCTGGAAAATCTAGGGAAAAATTTCAAGGGAAAGGAAGTGTGAGTTGTCCATTACATGCCTCTAGAGGAG 1627
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1628 TATTATCTTTCTTTTCTAAAAAACAAATGCAAGATATTCCCATAAATCCTAGAGATCATTTATCCAGTAGCAAA 1701
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1702 CAGGTATCCTCTGTATCTCCTTGTGAACCGGGAACATCAGGCTTTAATAGCAGTAGTTCTTCTTACATGTCTAG 1775
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1776 CCAAAAGGATTATTCATATTATTTAGATAATAGATTAAAAGATGAACGAATAAGTCAAGGACCTAAAGAACCTC 1849
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1850 AAGGATTCCACTTTACAAATTCAAACCCTGCTGTGTCTGCTTTTCATTCATTTCCAAACTTGCAGAGTGAGCAA 1923
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1924 CTTTTCTCCAGAAACCACACTACAGATAGCCATAAGCAAACAGTAGCAACAGACTCTCATGAAGGACTTACAGA 1997
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 1998 AAATAGAGAGCCAGATTCTGTTGATGAGAAAATTACTTTCCCTTCTGACATTGATCCTCAAGTTTTCTATGAAC 2071
Sbjct 1204 -------------------------------------------------------------------------- 1203
Query 2072 TACCAGAAGCAGTACAAAAGGAACTGCTGGCAGAGTGGAAGAGAGCAGGATCAGATTTCCACATTGGACATAAA 2145
Sbjct 1204 -------------------------------------------------------------------------- 1203
