Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11612
- Subject:
- XM_011525797.1
- Aligned Length:
- 2237
- Identities:
- 1180
- Gaps:
- 1039
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGAAGCTGGGGGTGGAGCCGGAGGAGGAAGGCGGCGGCGACGACGACGAGGAAGACGCCGAGGCCTGGGC 74
Query 1 -ATGGAACTGGCGGACGTGGGGGCGGCAGCCAGCTCGCAGGGAGTTCATGATCAAGTGTTGCCCACACCAAATG 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGAACTGGCGGACGTGGGGGCGGCAGCCAGCTCGCAGGGAGTTCATGATCAAGTGTTGCCCACACCAAATG 148
Query 74 CTTCATCCAGAGTCATAGTACATGTGGATCTGGATTGCTTTTATGCACAAGTAGAAATGATCTCAAATCCAGAG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTTCATCCAGAGTCATAGTACATGTGGATCTGGATTGCTTTTATGCACAAGTAGAAATGATCTCAAATCCAGAG 222
Query 148 CTAAAAGACAAACCTTTAGGGGTTCAACAGAAATATTTGGTGGTTACCTGCAACTATGAAGCTAGGAAACTTGG 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTAAAAGACAAACCTTTAGGGGTTCAACAGAAATATTTGGTGGTTACCTGCAACTATGAAGCTAGGAAACTTGG 296
Query 222 AGTTAAGAAACTTATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGTTGGTATTAGTTAATGGAGAAGACC 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGTTAAGAAACTTATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGTTGGTATTAGTTAATGGAGAAGACC 370
Query 296 TGACCCGCTACAGAGAAATGTCTTATAAGGTTACAGAATTACTGGAAGAATTTAGTCCAGTTGTTGAGAGACTT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGACCCGCTACAGAGAAATGTCTTATAAGGTTACAGAATTACTGGAAGAATTTAGTCCAGTTGTTGAGAGACTT 444
Query 370 GGATTTGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGAGACTACAGCAGCTGCAAAGTGATGAACT 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGATTTGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGAGACTACAGCAGCTGCAAAGTGATGAACT 518
Query 444 TTCTGCGGTGACTGTGTCGGGTCATGTATACAATAATCAGTCTATAAACCTGCTTGACGTCTTGCACATCAGAC 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCTGCGGTGACTGTGTCGGGTCATGTATACAATAATCAGTCTATAAACCTGCTTGACGTCTTGCACATCAGAC 592
Query 518 TACTTGTTGGATCTCAGATTGCAGCAGAGATGCGGGAAGCCATGTATAATCAGTTGGGGCTCACTGGCTGTGCT 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TACTTGTTGGATCTCAGATTGCAGCAGAGATGCGGGAAGCCATGTATAATCAGTTGGGGCTCACTGGCTGTGCT 666
Query 592 GGAGTGGCTTCTAATAAACTGTTGGCAAAATTAGTTTCTGGTGTCTTTAAACCAAATCAACAAACAGTCTTATT 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGAGTGGCTTCTAATAAACTGTTGGCAAAATTAGTTTCTGGTGTCTTTAAACCAAATCAACAAACAGTCTTATT 740
Query 666 ACCTGAAAGTTGTCAACATCTTATTCATAGTTTGAATCACATAAAGGAAATACCTGGTATTGGCTATAAAACTG 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCTGAAAGTTGTCAACATCTTATTCATAGTTTGAATCACATAAAGGAAATACCTGGTATTGGCTATAAAACTG 814
Query 740 CCAAATGTCTTGAAGCACTGGGTATCAATAGTGTGCGTGATCTCCAAACCTTTTCACCCAAAATTTTAGAAAAA 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCAAATGTCTTGAAGCACTGGGTATCAATAGTGTGCGTGATCTCCAAACCTTTTCACCCAAAATTTTAGAAAAA 888
Query 814 GAATTAGGAATTTCAGTTGCTCAGCGTATCCAAAAGCTCAGTTTTGGAGAGGATAACTCCCCTGTGATACTCTC 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAATTAGGAATTTCAGTTGCTCAGCGTATCCAAAAGCTCAGTTTTGGAGAGGATAACTCCCCTGTGATACTCTC 962
Query 888 AGGACCACCTCAGTCCTTTAGTGAAGAAGATTCATTTAAAAAATGTTCATCTGAAGTTGAAGCTAAAAATAAGA 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGACCACCTCAGTCCTTTAGTGAAGAAGATTCATTTAAAAAATGTTCATCTGAAGTTGAAGCTAAAAATAAGA 1036
Query 962 TTGAAGAACTACTTGCTAGTCTTTTAAACAGAGTATGCCAAGATGGAAGGAAGCCTCATACAGTGAGATTAATA 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTGAAGAACTACTTGCTAGTCTTTTAAACAGAGTATGCCAAGATGGAAGGAAGCCTCATACAGTGAGATTAATA 1110
Query 1036 ATCCGTCGGTATTCCTCTGAGAAGCACTATGGTCGTGAGAGTCGTCAGTGCCCTATTCCTTCACATGTAATTCA 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCCGTCGGTATTCCTCTGAGAAGCACTATGGTCGTGAGAGTCGTCAGTGCCCTATTCCTTCACATGTAATTCA 1184
Query 1110 GAAATTAGGGACAGGAAATTATGATGTGATGACCCCAATGGTTGATATACTTATG---AAACTTTTTC---GAA 1177
||||||||||||||| |.|...|.||||| ||| ||.|| |..||.|.|| .||
Sbjct 1185 GAAATTAGGGACAGG---------TCTCCAGTCCCCA------GAT----TTCTGTGCATCCTCTCTCATGCAA 1239
Query 1178 ATATGG-TGAA---------TGTGAAGATGCCATTTCACCTTACCCTTCTA-AGTGTGTGCTTCTGCAACCTTA 1240
|.|.|| ||.| ||||||| ||| ||.||||..||
Sbjct 1240 AGAAGGCTGGAAGACAAACTTGTGAAG---------------------CTAGAGGGTGTTTTT----------- 1281
Query 1241 AAGCACTAAATACTGCTAAGAAAGGGCTTATTGATTATTATTTAATGCCATCATTATCAACTACTTCACGCTCT 1314
||||||.||
Sbjct 1282 ----ACTAAACAC------------------------------------------------------------- 1290
Query 1315 GGCAAGCACAGTTTTAAAATGAAAGACACTCATATGGAAGATTTTCCCAAAGACAAAGAAACAAACCGGGATTT 1388
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1389 CCTACCAAGTGGAAGAATTGAAAGTACAAGAACTAGGGAGTCTCCACTAGATACCACAAATTTTTCTAAAGAAA 1462
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1463 AAGACATTAATGAATTCCCACTCTGTTCACTTCCTGAAGGTGTTGACCAAGAAGTCTTCAAGCAGCTTCCAGTA 1536
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1537 GATATTCAAGAAGAAATCCTTTCTGGAAAATCTAGGGAAAAATTTCAAGGGAAAGGAAGTGTGAGTTGTCCATT 1610
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1611 ACATGCCTCTAGAGGAGTATTATCTTTCTTTTCTAAAAAACAAATGCAAGATATTCCCATAAATCCTAGAGATC 1684
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1685 ATTTATCCAGTAGCAAACAGGTATCCTCTGTATCTCCTTGTGAACCGGGAACATCAGGCTTTAATAGCAGTAGT 1758
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1759 TCTTCTTACATGTCTAGCCAAAAGGATTATTCATATTATTTAGATAATAGATTAAAAGATGAACGAATAAGTCA 1832
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1833 AGGACCTAAAGAACCTCAAGGATTCCACTTTACAAATTCAAACCCTGCTGTGTCTGCTTTTCATTCATTTCCAA 1906
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1907 ACTTGCAGAGTGAGCAACTTTTCTCCAGAAACCACACTACAGATAGCCATAAGCAAACAGTAGCAACAGACTCT 1980
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1981 CATGAAGGACTTACAGAAAATAGAGAGCCAGATTCTGTTGATGAGAAAATTACTTTCCCTTCTGACATTGATCC 2054
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 2055 TCAAGTTTTCTATGAACTACCAGAAGCAGTACAAAAGGAACTGCTGGCAGAGTGGAAGAGAGCAGGATCAGATT 2128
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 2129 TCCACATTGGACATAAA 2145
Sbjct 1291 ----------------- 1290