Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- NR_033850.1
- Aligned Length:
- 2503
- Identities:
- 172
- Gaps:
- 2308
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTAATCTGCGTCAGCTGGGGCTGTATTTGGAAGAAGAGGCGCTGCCTCCAGTCAAGTCTGTTTTTTTCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGGGACTGTAGGCCTTTGTGCCCTGCTGGAAATCGTGAAAAGCAAGAGAGAAGAGTCCCAGTTATTCTTGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTGATAAGTGAATTTAGGGCAACTACTAGTGCCAGTAGGCATGGGGGATCTACCGATGAAGAAGACACAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTCCGCTCTCGTGGAGTTTACAGAGAATAATGAATGAGATTAATTAAGAAATGAATGAGATTAATTGAATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATTGCCAGACTGAATGAAGTGAATGGCCTGAATATAAACAATTTCCAAATACAGATAACACTGCATATCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTTTGCAATACTCCCTTCGCACTTGAGGAAGAAGCACTATGTCTGGGGCCAAGTGTGACCCTTTGTCTGTTGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGTACCTTTCATTTCGCACTTTCTCCTCTGCTGCTCTCCAGAGGAAGTTATTGTCCCAAAGTTGTGTGTCATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCGAAGTGTCTGGGATCCCCGAGTGCCTGTGGTGCCCAAGAGCTATGAATCTGCTATCATCAACACAGAGGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCTTCTGAATGGGCTATGTCTACAGTGATGCTGCAAATGGAAGCTAACCCTAGGATGACTGGCCTCTGACACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGCCATCCCATCATCTGTCATGGGTTGACCCATCCATCCCCTCAATGAGCCTGACCTTCAGGACCACTGACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGAGCAGTCAATAGAAATTAATTGTTAAATACCCAGAAAATCTGAAATGGTATTTAATATGCAGTTCATCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCAAAAGTTCCTTAAATCTTCATCTAGAAAAGTTATTTATAAGGGATGAATATGTTGTATGAATATGTTGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCAAATATTATATTCAAGGGCAAGACCATGAAAACAGTTTAAGAATCCGACAGGGAATTAGATAAAGACATCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGTGCACTTGTCAAAATACAGCTATCAAGAATGATGATGTTGAAAAATAGTTTAGCAATATAATTGTCTAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACAGGGAGTCTGAGATTTTACCCAACTTGTGAGTTAACAACTCTGCTATAGCTTCATGAAAGAAGACACAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTCCTGGGTCAGGAACAAAGGTCTCTAATACTCACAGCAATATCAGGAGCCAGAATTTCAGGATCCTTTTTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCAGTTTCTCAAGTCCTAATTACCACCGAGTTACAGGAAAGGGCCAGGTAACACTAGCACTGCCATCAGTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTATTACAGAACAGGAACTCCAAGCTTAGGAAACCCAAATCTTTTATAGTTAACAATGAACACATCTGCCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTTCTGAAGGGAGACGCTACCCCAATCTTCCACACCTGTTCACTATATAAATATCTGTGAAAAGATAGACAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAATAGGTGGAGAATGCCTCTGCTCACAAGATGTGCAGAAACGTGAGAGGCTCATGGAGAACTGTTTCCCTAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATGACAAAATGCTGACGATATATTGTTATGTAAAATAAAGCAGGCATTTTTCACCTCATTTTCATGAAATATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGTGTTTATATAGATATTTAGAAAAGTATGAAAGGACATTCATCCAGATATCAATAGAAGAGTTTATTATTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCTAGTTGTAAGTTCAAACTTTTCTAGTAAAAATAGATTACTTGTGAAATTATTTTTAATCTTTTTTTTTTTT 1702
Query 1 ----ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTC 70
|||||||||..|||||||.||||||||.||||||||||||.||||||..||||||||||||.||..||||
Sbjct 1703 TGAGATGGAGTCTTGCTCTGTCGCCCAGGCTCGAGTGCAGTGGCATGATCTCAGCTCACTGCAACATCCACCTC 1776
Query 71 CTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTG--TGCCACCATACCTGG 142
||||||||||||||||||||..|||||||||||..||||||||||||||.|| ||| |||||||||.||..|
Sbjct 1777 CTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTATAG--GTGCATGCCACCATGCCCAG 1848
Query 143 GTAATTTTTGCATTTTTAGTGGAGA-GGGAGTTTCACCATGTTGGCCAGGTTGGTCT----------------- 198
.|||||||||.|||||||||.|||| |||| ||||||||||||||.||||.||||||
Sbjct 1849 CTAATTTTTGTATTTTTAGTAGAGACGGGA-TTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGT 1921
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1922 GATCTGCCCACCTCGGCCTCCCAAAGTGCTAGAATTACAGGTGTGAGCCACTGCACCCCTCCTAAATGTCAATT 1995
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1996 TAATAACTGAGGGAGCCCTTAAAATACCCCGCTGACTTCCACACGGGTGTGTAAAATAGAATCTGCTCACGTCT 2069
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2070 TAGAGGAGATAAGTACATGCTTAATGTTCTTAGGAGAGACCTGCCTTTTGACATGGAAGCTGTGGTATTGTTGA 2143
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2144 CAAGAGCATACCTCCTTAAACCATGCAAACCACGTTCACATCAAAGCTGCCTACGAATGATTATTTTCCATGAT 2217
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2218 GCTATGCTCCCTCCTGCCTGCCTCAGTGGCAAGTGTGACTCAGCAAGTGTATCCAGGGCATCCCTCACTCTTAC 2291
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2292 TTATTTTTGCCAAATGCAGTGGAAATGTATAGACTTTTTTTCATATTTATGTTGGCTGCAGAGCATAAATCTGA 2365
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2366 ATAGGTTCTCCAAAGTAAGCTTTTTCTGCATGCATTTGCTCCCAATGATGATAGGTATTATGAATTGCTTTATA 2439
Query 199 ------------------------------------------------------------- 198
Sbjct 2440 GTAATCATTATCCTTTTCCATATGTTTTACGGTTAGTCTGTGCTATAAACTTGTTTGATTT 2500
