Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- XR_001752525.2
- Aligned Length:
- 2728
- Identities:
- 171
- Gaps:
- 2530
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCTAGGTTTCGCCGGCCGCGCGGCCAGATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGTTGCAGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCGGCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGTGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATGTTCTCAAACAGCATTTTAATGATTTAAAGGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAGGTGGACACCATTGAACAGGAGACCATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGAGGACTTAGTCCGAGAAGGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAAAGGCCTCGCACATTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGATGACTCAATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGAACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGATTACAGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCAGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACATAGACCCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGTGTCCCCCAGATAGGTCATTCCACATTGGTGCCTCATGAGTTGAAACTGTGGGACAGCCAGACAGAAGAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCAGCGGGATCAAGCTGTGTGCATTAGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAGTTACTTCTGGGTCCACTGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTCAAGCTTCGAGTAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTACTTTGGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAGATGTTTGGGTGCTTGGCTTTGGTTTTCAGGGTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAACGTAGCTGTCCTCAGCCCAGCGTAGTTGTAATTGCTTTAAAAAAAAAGTTGAATTCATCTCTAACTTAGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATTGGAAAGTGTTTACTGGATTCATTTTGTAATATTTTAGCAAAAAGAGACTTCAATGTTGTGGACAAAATCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACAATTCAGTCAATTTTATTTTTAGCATACTGTTAAATATCACATCACAATAAAAATCAAATTGGCATTAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTATAGAAGATATAGGAAGTTCTATACCCTTCCACTGTACTTCTCAAAGTTGGTTATTAGACCAGGAAAACTTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATGTAATATTATTTTTAAAATCATCTTAAAGGATCCAAGTCCATGTAACTCTTTAGAACAAGAGGAATAGGTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACATGAATGTGTTGACTGTGCTCTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATGTTCAGGTATTTGTAAGCAGTGTTGACTTTTATCCCCTCTTCAGTAATCTTTAAGTCCCCAAAACATTATA 1776
Query 1 ---------------------ATGGAGTCTCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCT 52
|.|||||||||||| ||||||.||||||||||||||||||.|||||||..|.|
Sbjct 1777 ACTTTTTCTTTTTTTGTTGAGACGGAGTCTCACTCTTGTCACTCAGGCTGGAGTGCAGTGGTGTGATCTCAGTT 1850
Query 53 CACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGT 126
|||||||||||||||||||...||||||||.||.||||..||||||.||||..|||||||||||||||||.|||
Sbjct 1851 CACTGCAACCTCTGCCTCCCACGTTCAAGCGATCCTCCTGCCTCAGGCTCCTGAGTAGCTGGGATTACAGGCGT 1924
Query 127 GTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-- 198
..|||||||.||||||.|||||||||.|||||||||.||||..|.||||||||||||||||||||.||||||
Sbjct 1925 CGGCCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTG 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 AACTCCTGACCTCAGGTGTTCCACCCACCTCAGCCTTCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGCAGT 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 GGACCAATTTTTGTATTTTTTTAAATGCTTGACCAAGTGTCTAAAATAGGCAAGTAGTACCTTTTGTTCTTTCA 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 TTGCAATTTGATACAGTATAGGCTACAGTATTTTTACAGGGTAAAACTAGTTATGGCAGTAGTATGCACAGCAG 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 TGTTAGCCATTTCATATGTATGTAATATGCACGTGTGTATCCAATCTGCCTGTGACATGCATTTTACTCTTTGC 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 AGAGAATGAGCTGCAGTCCAGTTTAATGTCAGTTTAATAAGTGGTCTCTTTTTAGCAGAGCAAAAAAATATAGC 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 GTAAATACTTATTTTTTTTAAAAACTTACTTAAATTTGTGTGTAAAATATTTATTTGAAGGACTTTAATATGTA 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 AAAATAATTGTCTTCTATGCCACCCTACAGATTTTATTTTAATGTGAATTATTTTTTTCATTTCATTTTTACCA 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 GTATAGTAAAAAAGTAGAAAAGCAAGTATGATATTTTTGTAAGATAATTTATTTGGGGATTCATGTTCCCTGTT 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 AGACAATCATGACCTTTTCTACTTGTCTTTTTATATATAAGTAGTAGATTTCCACTTGTTTAGGGATTAAGAAG 2664
Query 199 ---------------------------------------------------------------- 198
Sbjct 2665 ATGTTCTAGAATGTAGATACCTTGTCCAGCCATAGGAATCAAAATAAAAAACTAAAAAAGTTCA 2728
