Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11616
- Subject:
- XR_930143.2
- Aligned Length:
- 4143
- Identities:
- 175
- Gaps:
- 3945
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGTGTTGCCGCTGCTGGCTGGGTGGGTGGGGTGGCCAGCTTTTATTGCCTTATTTGTCCCCGCCTATGTCCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGATTGGTCCATTTTACAGAGTGCTGATTGGCCCATTTTACAGGGTGCTGACTGATCCATTTTACAGGGTGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGGTCCATTTTACAAACCTCTAGCTAGCCACGGAGCGATGACTGGTGCGTTTTACAATCCTAACTACAGAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGACTGGGGCATTTTACAATCCTCTTGTAAGACAGAAAAGTTCTCCAAGTCCCCACTCGACCCAGGAGGTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTGGCTTCACCTCTCACTGGGATTGGGGCAGAGGAAGGCTGCCTCCTGGAAGTGTAAAAGCTAAATAGAGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTGGCTGGTGTCCGGGCTCTGGACTGGTCAGCTTGCAAAGCAAAGGCACGCCCAACAGCGAGTCGTTTGCTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGAGGACTCAGCTAACCCTGGGAGGGGCAGTTCCTTCCTAAGACCACAAGGCCCCAAGGATGAAGCAGCATA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAATCAGTAGAAAACAAACAAACAAACAAAAAACCCATGATCAATACAGAATGACTGTTTGACATGTGTGGCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTAAAGATTGTGCGTGCAGATGTTTAGATAAATATGAGAACCAAACAGACGTGAAGTAAGCTAAGACGACTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGTATCATTCAATTTCTATTGGTCCTGAAATCAACACGTTTCCTTTGCGTGGTTTTGCAAAAGGAATCCCTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGGGGAAACAATCTTTTCTGATACCCACCTCCGAAACTTTTTGTTGGAGTACAACATACATTCAGAAAATCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCTATCCTAAGGTTAGAGCTCATGAATGTTCACAAACTGGACACATCCAGGAAACCAGCACGCAGACCAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTGTGGTAAGGGCAGCTGGAAGCCTTCTTGTATTCCCTCCTTTTCACCTGTATCCTAACGTCTTATCCTAAC 962
Query 1 -------------------------------------------------------------ATGGAGTCTCACT 13
|.|||||||..||
Sbjct 963 TAACTTATCCTAACTGTACCATCCTAATTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCT 1036
Query 14 CTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTC 87
||||||||||||||||||||||||||||.|||||..|||||||||||||||.||||||||||||||||||||||
Sbjct 1037 CTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTC 1110
Query 88 TCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA-TTTTTGCATTTTTA 160
|||.||||.||||||||.|||||||||||||||||.|..|||||||||..||.||.||| ||||||.|||||||
Sbjct 1111 TCCTACCTTAGCCTCCCGAGTAGCTGGGATTACAGTCACGTGCCACCACGCCCGGCTAATTTTTTGTATTTTTA 1184
Query 161 GTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------------ 198
||.||||.||.|||||||||||||.||||||.||||||
Sbjct 1185 GTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCACCTTGACCT 1258
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1259 CCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGCCCAGTCCCCCATCCTAACTTCTAACAACATAGGTTAG 1332
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1333 TTTTGCTGGCTTTTCCCTTCTTATGAATGAATTCAAATTGTGTCTAGCTCATTGTGTTCAAATTGTATTTGGAA 1406
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1407 ATTCACCCACATTATTGCCTAAGGTTGAAGATAGTTTATTTTTGTTGCTGTGCAGTATGTGTGAATATATCACA 1480
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1481 CAATGTATATGACGTATACTTATCCATTCCAATGCTAAGGTGAACGTGGGAAATTTCTAGTTTGGAATGGTAAT 1554
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1555 CCCTTCACTGACTTTTTGCCTGCTGGTCTGTGTCAGTCTTTTAGTTGCAAGAAACAGAACTTCCTCTGGACAAC 1628
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1629 CTGACTCAGAAAGATGGGTTTGCCAGAACCATTCTGCCTAGCTCATAGAATAGAAGGAAAAGGGGAACAGCCAG 1702
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1703 GCTTTATTAGGGACGCCCTTACTAGGGGACCCTGGTGGCAAGAACTCGAGGACAACCTCTCTGAGACAGAAGGG 1776
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1777 CAAGTGGCTCGACTTGCCTAGAGCAGGGTTCCTACCTCTGTTGCGTGGGACCCTAGTGGTCCCCAGGAATTTTA 1850
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1851 GAGTGTGCCATGGAGGAAAACAAGACCTGTGGCTCATTCAGTTGGAAAAGTGGTTTAAAAAGGTTACACTTCTC 1924
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1925 AGGACCTTTCACAGGAGAGGGCACACTCTAATCTCAAGGAAGGGATATTCCTGAACTTGGCTTTTCTCATGGGG 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 CATCTACTCATATCTGAAGGGCACTCGTGCTCCAAGAAACACAGCTTGGGAAAATGCTAAGCCAAAGCCAAGTG 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 AACAGAGGGGAGAAGTGGAAAATACGTTTTGGCCTGCATTTTTAATGCACAGATAGGGACTTTTTTTTTTTTCT 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 GGAAAATAGGAAACTCTGAAAACAGATGCTCAGTGTGTGACCCTTCAGGAAGCGCCGTCTGGCAAGTGTGAGAG 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 TTACAGTTTGCAGGGTGCCCTCGGGTCCACTGTCGCATCCGTTCCCAGGGCTGGGTGGTATGGGTGGGATGCCC 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 AGATGACGGAACTGGCCGCCGATGTCACGCGCTCCTAGAAAGCGGAGAATCCAGGGCAGAGTTAGAGTCAGACC 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 TAGGCTCTCGCAGAGAACTGCATCGCGCTCCCAGCTCTGCTGCCTCGGTGCGGGGACGGGGCTCTGCATGAGGA 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 CTGGGAATGTAAGTCCCGGGCCTGGACAGGCGCCCCTGGGAGCTAGCCTGGAGGAGATTCAGTAGAAGGCTGAG 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 GAGTCGGCTTGGAGGGTCTCGGCAAGGCGGCGCGGATGGAGATGAAGCTGCGAAGAATGCTGAGAAAGAGCGGC 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 CGGGGGCCTTGGAGGGAAGCTAGGGAAACGCTGCGGGGGCAGCCGAGGCCGTCGGCGCCCCGGGAGAAGTGATC 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 TCAGAGGCATGGTCTTAACACCGCGCACAGTTCCTTGCAAGTTGAAGAGTAGACCCAAATGATCAGTTCTAAAA 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 TTCTATTCTTATTGAAGATTACTGGTGGAAATATCAATGCAAACAAAATGAAAAAGTTCAACAATGATTAATAC 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 TGCATTTCAACAGAAGAATCAAATCATCTTGACAAAACTTCAATGGGCAAAATTTGCCTTGGGGAATTTTATGC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 AGGGGAATCCTTGGGTCTGATGTGTGGTGGGCTTTGGATGTGTTGTGTAGCTCAGTGTCCCTTCCTGCTACTCC 2960
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2961 TAGTCATCTCCAGAAACTCAGACCACCCATCTACTAAAGGCAGGTGGATGAGCAAGGGGGCCTCGGAGGCATTC 3034
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3035 CGGATCACACTGAACCTGAGCCCCACCGCCTGACCCACTCAGTGTCACTGTTAACAGAAACTCGCTGCCATCTG 3108
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3109 GCCTCAGGCCTGCCTCCTTCCTATAGAACTTGACACTGGAAGCACCAGGCGAGCTGGACCTTCTGCTGCTACTG 3182
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3183 CACTCCCATGATGCAGCCTGAGAATGAAGCCCACCAGAGTGACAGAGAGCAGACCTGAGTGGTGAGCTGGTGAC 3256
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3257 ACAGGGTGTGGGTGGTGTCCCTTGAGCTTCGACACCACGCCACACCTGAAACCAGCCTGACATCCATGATTTTG 3330
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3331 CTTTTTTGCTTAAACCAGTCTGCGTCATTTTCAACAAAAGAGTTCTACTAGATATGACAAATTTCTCTAGAAGA 3404
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3405 CCTAAGAAGTGAAAGACTTGAAGCTATTCCAGTGGTTCAGGAACTAGGACACTGGTAGGAAACTGGAAAGAAGG 3478
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3479 CATCAGAGTTAAGGAAATATTTATGAGGTCAACTCTGGAAGTCTTGGTTACTGAGTGAATACAGTGGCTGAGAG 3552
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3553 GAATGGAAGCATCCAACCAAATAAAAAAAGATGGTGCTGAGATTTGGGTTATGAGGTCAATGACTGAAGCAATG 3626
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3627 CGATTAACTGAGTTAGGAGTCTCAAATATAGGATGAGTGCAGAGTTGAGGATGAAGAATTCTGCTTTGGACACA 3700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3701 ATGAGTGTGAGGTGCCCAAGGATAACCCAACGGGAAGCAGTCACACCAAAGCAACAGGGTGTGCACCTGAAACT 3774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3775 CAGAAGGGTGATTGGGCTATGGTGAAGATTCCTGATCACCCATAAATGAATTCATTAAAAGCATGAGAGTGAGT 3848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3849 GGAGGGGCCCCTAGAATATGGTGGGTGCATGAGACTAACCCTAGATTGGGGATAGCTCCCTGGGAAATCCAAGG 3922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3923 GACAAGGTGAGGAGGAGGAGGCGGAGCCCACCAAGGAAACTAGAAAGAGACCGCTGGAGAGGTCCGAGGACAGC 3996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3997 AAGGAGCACAGCCTTCAAGTCTGGGAGCCAACTATCCAAGAAGAGAGTGGTTTGCTATGGATGCCGTGGGCCAC 4070
Query 199 ------------------------------------------------------------------------- 198
Sbjct 4071 CACGTCCCATCTAGGAAAGCAAGTTGAGGTCTCTCTTGAATACATTGGGATTGATTACCCAGACTTTAAAGAA 4143
