Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11636
- Subject:
- XM_006511305.3
- Aligned Length:
- 1895
- Identities:
- 550
- Gaps:
- 1270
Alignment
Query 1 ATGAATAGATACACAACAATCAGGCAGCTCGGGGATGGAACCTACGGTTCCGTCCTGCTGGGAAGAAGCATTGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTCTGGGGAGCTGATCGCTATTAAAAAAATGAAAAGAAAATTTTATTCCTGGGAGGAATGCATGAACCTTCGGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGTTAAGTCTTTAAAGAAGCTCAACCATGCCAATGTAGTCAAATTAAAAGAAGTTATCAGGGAAAATGATCAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTTTATTTTATCTTCGAGTACATGAAGGAAAATCTTTACCAGCTCATTAAAGAGAGAAATAAGTTGTTTCCTGA 296
|||||||||||.||||||||||||||||||||.|||||||||||||||||.||
Sbjct 1 ---------------------ATGAAGGAAAACCTTTACCAGCTCATTAAAGAAAGAAATAAGTTGTTTCCAGA 53
Query 297 GTCTGCTATAAGGAATATCATGTATCAGATATTACAAGGACTCGCATTTATTCACAAACACGGCTTCTTTCATC 370
||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||||||||.|||||.||.|
Sbjct 54 GTCTGCTATAAGGAATATAATGTACCAGATATTGCAAGGACTGGCATTCATTCACAAACACGGTTTCTTCCACC 127
Query 371 GAGACTTAAAGCCTGAGAACCTCCTCTGCATGGGACCAGAACTTGTGAAAATTGCAGACTTTGGTTTGGCCCGA 444
|.||||||||.||.||||||||||||||||||||||||||||||||||||||.||.||||||||.|||||.|||
Sbjct 128 GGGACTTAAAACCCGAGAACCTCCTCTGCATGGGACCAGAACTTGTGAAAATCGCCGACTTTGGATTGGCTCGA 201
Query 445 GAAATACGATCAAAACCTCCATATACAGATTATGTATCTACCAGATGGTACAGGGCTCCAGAAGTACTCCTGAG 518
|||||.|||||||.||||||.||.|||||.|||||.|||||.||||||||||||||||||||.|||||.|||||
Sbjct 202 GAAATCCGATCAAGACCTCCGTACACAGACTATGTGTCTACTAGATGGTACAGGGCTCCAGAGGTACTGCTGAG 275
Query 519 GTCTACCAACTACAGCTCCCCCATTGACGTCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTCAGGC 592
.||.||||||||||||||||||||||||.||||||||||.||||||||||||||.||.||.|||||.|||.|||
Sbjct 276 ATCCACCAACTACAGCTCCCCCATTGACATCTGGGCGGTAGGCTGCATCATGGCGGAGGTGTACACGCTCCGGC 349
Query 593 CACTCTTCCCTGGAGCCAGTGAAATTGACACAATATTCAAAATTTGCCAAGTGCTGGGGACACCAAAAAAGACT 666
|.||.||||||||.||||||||||||||||||||.||||||||||||||||||.||||.||||||||.||||||
Sbjct 350 CCCTTTTCCCTGGGGCCAGTGAAATTGACACAATTTTCAAAATTTGCCAAGTGTTGGGAACACCAAAGAAGACT 423
Query 667 GACTGGCCTGAAGGCTATCAACTTTCAAGTGCAATGAACTTCCGTTGGCCACAGTGTGTACCCAATAACTTAAA 740
|||||||||||||||||.||.||.||||||||.|||||.||||..|||||.|||||..||||||||||||||||
Sbjct 424 GACTGGCCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAAA 497
Query 741 GACCTTGATTCCCAATGCTAGCAGTGAAGCAGTCCAGCTCCTGAGAGACATGCTTCAGTGGGATCCCAAGAAAC 814
|||..|.||.||.|||||||||||.|||||..|.|||||||||||||||.||||||||||||||||||||||||
Sbjct 498 GACTCTAATCCCAAATGCTAGCAGCGAAGCCATTCAGCTCCTGAGAGACTTGCTTCAGTGGGATCCCAAGAAAC 571
Query 815 GACCAACAGCTAGTCAGGTTTTCTTCCATTTTCTTGTTATAACGTTCATATCTAAC---------------TCT 873
|||||||.|||||||||| .|||||.||.|.||| ||.|.||.|||..|| ||.
Sbjct 572 GACCAACCGCTAGTCAGG--CTCTTCGATATCCTT------ACTTCCAGATCGGACACCCACTGGGCATCATCA 637
Query 874 GAA----------------------------------------------------------------------- 876
|.|
Sbjct 638 GCAAGGACTCAGGAAAACCACAGAGAGAGGTCCAGGACAAGACAGGCCCTCCTCCTTACATCAAGCCAGCCCCT 711
Query 877 -------------------------------------------------------------------------- 876
Sbjct 712 CCTGCCCAGGCCCCGGCCAAGGCATATACGCTGATTTCTTCACGACCAAGCCAAGCCAGTCAGCCCCCTCAGCA 785
Query 877 -------------------------------------------------------------------------- 876
Sbjct 786 TTCTGTGCACCCCTACAAAGGCGATGTCTCTAGGACTGAGCAGCTGAGCCATGTTCAGGAGGGCAAGCCAAGCC 859
Query 877 -------------------------------------------------------------------------- 876
Sbjct 860 CTCCATTCTTCCCATCCCTCCACAATAAGAATCTTCAGCCAAAAATCCTAGCCAGCCTGGAACAGAAAAATGGT 933
Query 877 -------------------------------------------------------------------------- 876
Sbjct 934 GAAATCAAGCCAAAGAGCAGGAGAAGATGGGGTCTCATCTCCAGGTCGACAAAGGGTTCTGACGACTGGGCCGA 1007
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1008 CTTGGATGACTTAGACTTCAGTCCCTCTCTCACCAGGATAGATGTAAAAAACAAGAAGAGACAGAGTGATGACA 1081
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1082 CCCTCTGCAGGTTTGAAAGTGTTCTGGACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACCACTGTCTCCACG 1155
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1156 CAGGCTTCCTCGCAGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTACTTGAAGCACTCTCG 1229
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1230 CTACTTGCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCAT 1303
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1304 GGTCCAGTTCCGGCTTGTCTGGAAAATCTTCAGGAACAGTATCAGTAGTGAGCAAAATAACTTCAGTTGGCTCA 1377
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1378 GGCTCTGCGAGCTCTAGTGGACTGACTGGAAGCTACATTCCTTCCTTTCTGAAAAAGGAAATCGGTTCTGTCAT 1451
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1452 GCAGAGGGTTCAGCTGGCGCCCCTCGCAGCCCCTCCCCCCGGCTACTCTTCCCTCAAGGCCGTGAGACCTCACC 1525
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1526 CGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGCCT 1599
Query 877 --------------------------------------------- 876
Sbjct 1600 GTGCACGGCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGCGG 1644
