Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11657
- Subject:
- NM_001368863.1
- Aligned Length:
- 2715
- Identities:
- 410
- Gaps:
- 2256
Alignment
Query 1 ATGGATTCCGAAAGACAAGTCAAGGTTAAGGACACTGATGACATTGAAAGTCCTAAACGCAGTATCCGAGACAG 74
||| ||| |||||.|||||.||||||||.||.||.||.|||||.|||||||||||
Sbjct 1 ATG-----CGA----------------AAGGAGACTGACGACATTGATAGCCCGAAGCGCAGCATCCGAGACAG 53
Query 75 TGGCTACATCGACTGCTGGGATTCCGAGCGCAGCGACTCCCTCTCTCCTCCTCGCCACGGCAGAGATGATTCCT 148
|||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||..|.|||||.||||
Sbjct 54 TGGCTACATCGACTGCTGGGACTCTGAACGCAGCGACTCCCTCTCTCCTCCTCGCCACGGACGGGATGACTCCT 127
Query 149 TCGACAGCCTGGATTCCTTTGGCTCTCGCTCTCGGCAGACGCCTTCACCAGATGTAGTCCTCAGGGGAAGCAGC 222
|.||||||||||||||.||||||||.|||||..|||||||.|||||.|||||||||||.||||||||||||||.
Sbjct 128 TTGACAGCCTGGATTCTTTTGGCTCCCGCTCCAGGCAGACACCTTCGCCAGATGTAGTTCTCAGGGGAAGCAGT 201
Query 223 GATGGGAGAGGAAGCGACTCTGAATCCGACTTGCCTCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTC 296
|||||.|||||||||||.||||||||.||||||||.||.||||||.||||||||||||||||.|||||.|||||
Sbjct 202 GATGGAAGAGGAAGCGATTCTGAATCAGACTTGCCGCACCGGAAGTTGCCAGATGTGAAGAAAGATGATATGTC 275
Query 297 TGCACGGCGGACTTCCCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAATC 370
.|||||..|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 276 CGCACGAAGGACTTCTCATGGTGAGCCGAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAACC 349
Query 371 AGACGGCCTACGTCCCCGCGCCTCTGAGAAAGAAGAAAGCAGAGAGAGAGGAATACCGCAAGAGCTGGAGTACC 444
||||||||||||||||.||||||||||||||||||||.||.|||.|.|||||||.|.|.|||||.|||||.|||
Sbjct 350 AGACGGCCTACGTCCCGGCGCCTCTGAGAAAGAAGAAGGCGGAGCGGGAGGAATTCAGGAAGAGTTGGAGCACC 423
Query 445 GCCACCTCCCCGCTGGGTGGGGAGAGGCCCTTCAGG-------------------------------------- 480
|||||||||||.|||||||||||.|||||||||||.
Sbjct 424 GCCACCTCCCCCCTGGGTGGGGAAAGGCCCTTCAGATACGGTCCCAGAACTCCTGTGTCAGATGACGCAGAGAG 497
Query 481 -------------------------------------------------------------------------- 480
Sbjct 498 CACGAGTATGTTTGACATGCGGTGTGAGGAGGAGGCAGCGGTGCTGCCGCACAGCAGGGCCCGCCAGGAGCAGC 571
Query 481 -------------------------------------------------------------------------- 480
Sbjct 572 TGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACGACAAATGGCAAGATGACCTGGCTCGCTGGAAGAGCCGG 645
Query 481 -------------------------------------------------------------------------- 480
Sbjct 646 AGAAGAAGCGCTTCTCAGGACTTGATCAAGAAAGAGGAAGAAAGGAAAAAAATGGAGAAGCTGATGTCTGGGGA 719
Query 481 -------------------------------------------------------------------------- 480
Sbjct 720 AGATGGGACAAGTGAGCGGAGGAAAAGCATCAAAACTTACAGAGAAATCGTCCAAGAAAAAGAGCGGAGAGAGA 793
Query 481 -------------------------------------------------------------------------- 480
Sbjct 794 GGGAACTTCATGAGGCGTACAAGAACGCAAGGTCGCAGGAGGAGGCCGAGGGGATCCTCCAGCAGTACATCGAG 867
Query 481 -------------------------------------------------------------------------- 480
Sbjct 868 AGGTTCACCATCAGTGAGGCTGTCCTCGAACGCTTGGAGATGCCAAAAATCCTGGAAAGAAGCCATTCAACAGA 941
Query 481 -------------------------------------------------------------------------- 480
Sbjct 942 GCCAAACGTGTCCTCCTTCCCAAACGACCCCAGCCCCATGAAGTACCTGCGGCAGCAGTCACTGCCCCCACCCA 1015
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1016 AGTTCACTGCCACGGTTGAGACCACCATAGCTCGCACCAGTGTCCCAGAGAGCATTGCGTCAGCAGGCACTGGG 1089
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1090 TCTCCAAGCAAAATCATCACTCCAAACACAGTGCCTATGCTGACACCCAGGCCTTACTCCCAGCCCAAAAACTC 1163
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1164 TCAAGAGGTTCTGAAGACTTTTAAGGTAGATGGGAAGGTCAGCATGAATGGGGAAATGGCCCCTGGAGATGAGG 1237
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1238 AAGGAAAGGAAAAAGAAGGCCCTGCAGCTGCAGCCCCTGGCCCTTCCTTAACCAAGTCCCAGATGTTTGAAGGT 1311
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1312 GTGGCCACGGTGCACGACTCTCCTGTGCAGGTGAAACAAGGCAGCAACAGCATCGAGATCAACATCAAGAAGCC 1385
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1386 AAATTCTGCTCCCCAGGAACTGACAGCAGCCTCTGAGGAAACTGAATCGAACGGCCAAGAGGATGAAGACGGTG 1459
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1460 AAGAAAGGCCAGGGACAGGGGATTTGGAGCCTGACTCGGCAGAACCCCAGCACTTTACGACAACTGTGACTCGG 1533
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1534 TGCAGCCCAACAGTGGCCTTGGTGGAGTTTTCATCCAACCCGCAGCTGAAGAATGAGGTGCCAGAACAAGGCCA 1607
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1608 GAAGAAGCCAGAAGATGAGATGAGTGGGAAGGTGGAGTTAGTGTTGTCACAGAAGGTGGCAAAGCCAAAATCCC 1681
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1682 CAGAGCCTGAAGCAACCCTGACGTTTCCATTTCTCGACAAAATGCCTGAAACCAACCAACTACATTTGCCAAAT 1755
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1756 CCCAGTTCTCAAGCGGATTCTCCAAGCAGTGAAAAGTCCCCTGGGAGCACACCCTTTAAGTTCTGGGCATGGGA 1829
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1830 CCCAGAAGAGGAGCGCCGGCGACAGGAGAAATGGCAGCAGGAGCAGGAACGTCTGCTGCAGGAGAGGTATCAGA 1903
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1904 AGGAGCAAGACAAGCTGAAGGAGGAGTGGGAAAAGGCCCAGAAGGAGGTCGAAGAAGAAGAACGCAGATACTAC 1977
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1978 GAGGAGGAGCGTAAGATAATTGAAGACACGGTGGTTCCATTCACTATTTCCTCAAGCTCTGCAGACCAACTGTC 2051
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2052 TACGTCCTTGTCTGTAACTGAAGGCAGCGGGACAAGGAATAAGATGGACTTGGAAAACTGCCCAGACAAAGAAA 2125
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2126 ACGAGAGAAGACAGAAGACGCCTTTCCAGGAGAATGACGGTGATTCATTGCTCAAAACTAGAGAAGGTGGTCTG 2199
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2200 CCAGAGGAGCAGAGCCTAACTCCAAGTCCCTCGGCTAACCCTGAAATCTCCGTGTCAAAAGGAATCCATCAGGA 2273
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2274 CCCGCAGCTGGAGGCAGAGGCTGGGGCCCCACACTGTGGTACAAACCCACAGCCAGCTCAGGATCCACCTCGGA 2347
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2348 ATCAACAGATACCAAACCCACCAACATCCACGTCGGAAGATGTGAAGCCCAAAACCTTGGCCCTGGAGAAAACC 2421
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2422 ATCAATCATCAGATGGAGTCTCCGGGGGAAAGGCGGAAGTCTATAAGCGGGAAGAAACTGTGCTCCTCCTGCGG 2495
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2496 GCTCACTTTGGGTAAAGGTGCTGCGATGATCATCGAGACCCTGAATCTCTACTTTCACATTCAGTGTTTCAGGT 2569
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2570 GCGGCATCTGTAAAGGACAGCTCGGAGATGCAGTAAGCGGGACAGACGTCAGGATTCGCAATGGTCTCCTAAAC 2643
Query 481 --------------------------------------------------- 480
Sbjct 2644 TGTACCGACTGCTACATGCGATCCAGAAGTGCCGGCCAGCCTACAACACTG 2694
