Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11660
• Subject: XM_011544133.2
• Aligned Length: 1290
• Identities: 1215
• Gaps: 75

Alignment

Query    1  ---------------ATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGT  59
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGT  74

Query   60  TCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCA  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCA  148

Query  134  GAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCCTGTG  207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCCTGTG  222

Query  208  CCTAAACAAACCATCAAAAAAACGAAACGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTC  281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTAAACAAACCATCAAAAAAACGAAACGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTC  296

Query  282  GCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAA  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAA  370

Query  356  GCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCT  429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCT  444

Query  430  GGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCA  503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCA  518

Query  504  AATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATA  577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATA  592

Query  578  AGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCA  651
            ||||                                                            ||||||||||
Sbjct  593  AGAA------------------------------------------------------------GATTCCAGCA  606

Query  652  GAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTA  725
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  607  GAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTA  680

Query  726  TGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTC  799
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  681  TGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTC  754

Query  800  GTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTAT  873
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  755  GTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTAT  828

Query  874  AAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGA  947
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  829  AAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGA  902

Query  948  CAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGA  1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  903  CAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGA  976

Query 1022  AATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAA  1095
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  977  AATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAA  1050

Query 1096  CAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGA  1169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1051  CAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGA  1124

Query 1170  AGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAA  1243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125  AGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAA  1198

Query 1244  GTGGACGCCCTAAGAAACAGAGAAAACAGAAA  1275
            ||||||||||||||||||||||||||||||||
Sbjct 1199  GTGGACGCCCTAAGAAACAGAGAAAACAGAAA  1230