Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11690
- Subject:
- NM_001144759.3
- Aligned Length:
- 3957
- Identities:
- 303
- Gaps:
- 3654
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACGCTCTCAATAGGAACCAAATAGGCCCTGGATGCCAGACCCAGACCATGGTGCAGAAAGGACCCTTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGATCGAGACAGGCAAAGGGCTGAAAGTGCAAACGGACAAACCCCACCTGGTGAGCCTGGGCAGTGGGCGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCACAGCCATCACCCTCCTGCCGCTGGAGGAAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTACAGGGCCCAGGCCTGGCTCCAGAGCACTGCTACATCGAGAACCTGCGGGGCACCCTCACCCTCTACCCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGCAATGCCTGCACTATTGATGGGCTCCCTGTCCGGCAGCCTACCCGGCTCACTCAGGGCTGCATGTTGTGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGTCAGTCCACCTTCCTTCGCTTTAACCACCCGGCTGAAGCCAAGTGGATGAAAAGCATGATTCCAGCAGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTGCAGAATCAGAAAGTCTGGTAAATGGGAACCACACCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAGACTGCAACACGGGGACCCTCTGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAGAAGGACCTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGAGATCATGGACTCACTGGTGCTAGAGGAGCCTGGAGCTGCTGGCAAGAAGCCTGCCGCAACCTCTCCACTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCACCGATGGCTAATGGTGGGCGCTACCTGCTGTCTCCCCCAACCAGCCCCGGCGCCATGTCTGTGGGCTCCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTATGAGAACACCTCTCCAGCCTTCTCTCCACTCTCTTCACCAGCCAGCAGTGGAAGCTGTGCCAGTCACTCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGTGGGCAAGAGCCAGGACCTTCTGTGCCCCCGCTGGTACCTGCCCGTTCCTCCAGCTACCATCTGGCCCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGCCCCCACAGTCCCGCCCAAGTGGTGCTCGCTCCGAGAGTCCTCGGCTGAGCAGGAAAGGGGGCCATGAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCTCCCAGCCCTGGCCTCCGGGGTCTGCTGACAGACAGCCCTGCAGCTACTGTCTTGGCGGAGGCCCGGAGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACTGAGAGCCCCCGGCTGGGTGGGCAGCTGCCTGTGGTGGCCATCAGCCTGAGTGAATACCCAGCTTCTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTCTCAGTCAACCCACCAGCATTCCTGGCAGCCCCAAGTTTCAGCCTCCAGTCCCTGCTCCCCGAAACAAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGCACACTCCAGGACCGCCCTCCCAGCCCTTTCCGTGAGCCTCCAGGCAGTGAGCGGGTGCTAACAACCAGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTCACGCCAACTGGTGGGCCGAACATTTTCAGATGGGTTAGCCACCCGTACCCTGCAGCCTCCTGAGAGTCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGCCTGGGCCGGCGGGGCCTGGACAGTATGCGAGAACTACCCCCCTTAAGTCCATCTCTGTCCCGGCGAGCTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCCCCGCTGCCCACCCGGACCACCCCAGATCCCAAGCTAAACAGGGAAGTGGCAGAGAGTCCTCGGCCCCGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTGGGCAGCCCATGGGGCTTCACCAGAGGACTTCTCCCTGACGCTGGGGGCACGGGGCCGTAGGACACGGAGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCTCACCCACACTGGGTGAGTCTCTGGCACCCCACAAGGGCAGCTTCAGTGGCAGGCTGAGCCCAGCCTACAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTGGGCTCTCTTACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCAGAGGAAGCTCTCCAGCGGGGACTTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGTGCCTGTCACAAGGGAGCGGAAAAATAGCATCACAGAGATCAGTGACAATGAGGACGACCTCCTGGAGTAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CACCGGCGACAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTGAACCTGTGTGCCGAATACAGCCGGGCTGATGGGGGACCTGAGGCTGGGGAGCTTCCCAGCATTGGGGAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCACCGCAGCATTGGCACTGGCAGGCCGGAGGCCCTCACGAGGCCTTGCAGGGGCCTCTGGGCGGAGCAGCGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGCCTGGCGTTGCCACCCAACGCCTATGGGAGAGTATGGAGCGCTCAGATGAGGAAAATCTCAAGGAGGAGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGCAGCACTGAGAGCACCCAGCAGGAGCACGAAGATGCACCTAGCACCAAGCTCCAGGGAGAGGTGCTAGCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGAAGAAGAGCGGGCTCAGGTGCTGGGGCACGTGGAGCAGCTCAAGGTCCGTGTGAAGGAGCTAGAGCAGCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGCAGGAGTCAGCCCGAGAGGCCGAAATGGAGCGGGCACTGCTGCAGGGAGAGAGGGAGGCAGAGCGGGCACT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCTGCAGAAGGAGCAGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTGGAGACAGGCATCCAGAAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGAGGGACAAGGAGGCAGAGGCCCTGGAGACTGAGACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CGGGAGAGCCGCGTGGAGGAGGAGCGCGAGCTGGCCGGCCAGGGGCTGCTCCGGAGCAAGGCTGAGCTGCTCCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGCATCGCCAAGAGGAAGGAGCGCCTGGCCATCCTGGACAGTCAGGCTGGGCAGATCCGGGCTCAGGCCGTGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGAATCAGAACGCCTGGCCCGGGACAAGAATGCCTCCTTACAGCTGCTGCAAAAGGAGAAGGAGAAGCTGACT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GTGCTGGAAAGGAGATACCACTCACTCACAGGGGGCAGGCCTTTCCCGAAGACCACATCGACCCTCAAAGAGGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTACCGCTCCAAGATGGATGGCGAGGCCACCAGCCCCCTTCCCCGGACCCGCAGCGGCCCCCTCCCCTCCTCCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTGGCTCTTCCTCCTCCTCCTCCCAGCTCAGCGTGGCTACCCTGGGGCGTAGCCCCTCCCCAAAGAGCGCTCTA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTCACCCAGAATGGCACGGGCAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATCGAGACCAAGCGCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACTAGCTCTGCAGCAGAAGGGACAACAAGTGATTGAAGAGCAGCGGCGGCGACTGGCTGAGCTGAAGCAGAAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CGGCAGCTGAGGCACAGTGCCAGTGGGATGCCCTTCACGGGGCAGCACCCTTCCCAGCGGGCCCCTCGGGCTTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCCCCTCTCATGCACCACTCTATCCTACACCACCTGCCTGCGGGGCGGGAGCGTGGGGAGGAGGGTGAGCACGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTATGATACGCTGAGTCTGGAGAGCTCTGACAGCATGGAGACCAGCATCTCCACCGGGGGCAACTCGGCCTGCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCCCTGACAACATGTCCAGCGCGAGTGGTCTGGACATGGGGAAGATCGAGGAGATGGAGAAGATGCTGAAAGAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCTCATGCAGAGAAGAACCGGCTCATGGAGTCGAGGGAGCGGGAGATGGAGCTGCGGCGGCAGGCCCTGGAGGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGAGCGGCGGAGGCGTGAGCAGGTAGAACGGAGGCTGCAGAGTGAGAGTGCCCGGAGGCAGCAGCTGGTCGAGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGAGGTCAAGATGCGGGAGAAACAATTTTCCCAGGCACGACCCCTGACCCGCTACCTGCCAATCCGGAAGGAG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GACTTTGACCTGAAGACACATATTGAGTCATCGGGCCATGGTGTTGATACCTGCCTGCACGTGGTGCTCAGCAG 3626
Query 1 ----------------------------ATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGTCTTCG 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CAAGGTCTGCCGTGGCTACTTGGTCAAGATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGTCTTCG 3700
Query 47 ACCGGCTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATTTCCAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 ACCGGCTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATTTCCAG 3774
Query 121 GCCATTGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCCAAGAGCCCGAACCCAGCCCTCACCTTCTGCGT 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GCCATTGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCCAAGAGCCCGAACCCAGCCCTCACCTTCTGCGT 3848
Query 195 AAAGACCCATGACCGGCTGTACTACATGGTGGCCCCATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTG 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 AAAGACCCATGACCGGCTGTACTACATGGTGGCCCCATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTG 3922
Query 269 TCACAGGGGCTGAGGGCTACACTCAGTTCATGAAC 303
|||||||||||||||||||||||||||||||||||
Sbjct 3923 TCACAGGGGCTGAGGGCTACACTCAGTTCATGAAC 3957
