Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11690
Subject:
XM_005271473.3
Aligned Length:
4128
Identities:
303
Gaps:
3825

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGCGCCTGGAGGGCGAAGGCGGCGGCCGAGAGGACCCCAGCTCGGCCTGGCGGGCCTCTGGCCACAGCCAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCACCGCTTGGGCCGAGGCCGAGGCCGACCCCCAGGGACACAGGAGCTCTGGAGCCTTAGGACCATGGACGCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAATAGGAACCAAATAGGCCCTGGATGCCAGACCCAGACCATGGTGCAGAAAGGACCCTTGGACCTGATCGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGGCAAAGGGCTGAAAGTGCAAACGGACAAACCCCACCTGGTGAGCCTGGGCAGTGGGCGACTCAGCACAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CATCACCCTCCTGCCGCTGGAGGAAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCACTACAGGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGCCTGGCTCCAGAGCACTGCTACATCGAGAACCTGCGGGGCACCCTCACCCTCTACCCCTGTGGCAATGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCACTATTGATGGGCTCCCTGTCCGGCAGCCTACCCGGCTCACTCAGGGCTGCATGTTGTGCCTGGGTCAGTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CACCTTCCTTCGCTTTAACCACCCGGCTGAAGCCAAGTGGATGAAAAGCATGATTCCAGCAGGGGGCCGAGCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGGGCCCCCCTACAGCCCTGTTCCTGCAGAATCAGAAAGTCTGGTAAATGGGAACCACACCCCACAGACTGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACACGGGGACCCTCTGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAGAAGGACCTGCAAGAGATCAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGACTCACTGGTGCTAGAGGAGCCTGGAGCTGCTGGCAAGAAGCCTGCCGCAACCTCTCCACTGTCACCGATGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTAATGGTGGGCGCTACCTGCTGTCTCCCCCAACCAGCCCCGGCGCCATGTCTGTGGGCTCCAGCTATGAGAAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCTCTCCAGCCTTCTCTCCACTCTCTTCACCAGCCAGCAGTGGAAGCTGTGCCAGTCACTCACCCAGTGGGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGCCAGGACCTTCTGTGCCCCCGCTGGTACCTGCCCGTTCCTCCAGCTACCATCTGGCCCTACAGCCCCCAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGTCCCGCCCAAGTGGTGCTCGCTCCGAGAGTCCTCGGCTGAGCAGGAAAGGGGGCCATGAGAGGCCTCCCAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTGGCCTCCGGGGTCTGCTGACAGACAGCCCTGCAGCTACTGTCTTGGCGGAGGCCCGGAGAGCCACTGAGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCCCCGGCTGGGTGGGCAGCTGCCTGTGGTGGCCATCAGCCTGAGTGAATACCCAGCTTCTGGTGCTCTCAGTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AACCCACCAGCATTCCTGGCAGCCCCAAGTTTCAGCCTCCAGTCCCTGCTCCCCGAAACAAGATTGGCACACTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGGACCGCCCTCCCAGCCCTTTCCGTGAGCCTCCAGGCAGTGAGCGGGTGCTAACAACCAGCCCCTCACGCCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTGGTGGGCCGAACATTTTCAGATGGGTTAGCCACCCGTACCCTGCAGCCTCCTGAGAGTCCCCGCCTGGGCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCGGGGCCTGGACAGTATGCGAGAACTACCCCCCTTAAGTCCATCTCTGTCCCGGCGAGCTCTCTCCCCGCTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCCACCCGGACCACCCCAGATCCCAAGCTAAACAGGGAAGTGGCAGAGAGTCCTCGGCCCCGGCGCTGGGCAGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCATGGGGCTTCACCAGAGGACTTCTCCCTGACGCTGGGGGCACGGGGCCGTAGGACACGGAGCCCCTCACCCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CACTGGGTGAGTCTCTGGCACCCCACAAGGGCAGCTTCAGTGGCAGGCTGAGCCCAGCCTACAGTCTGGGCTCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTTACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCAGAGGAAGCTCTCCAGCGGGGACTTGCGGGTGCCTGT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CACAAGGGAGCGGAAAAATAGCATCACAGAGATCAGTGACAATGAGGACGACCTCCTGGAGTACCACCGGCGAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCATCCTGAACCTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTGCCGAATACAGCCGGGCTGATGGGGGACCTGAGGCTGGGGAGCTTCCCAGCATTGGGGAGGCCACCGCAGC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATTGGCACTGGCAGGCCGGAGGCCCTCACGAGGCCTTGCAGGGGCCTCTGGGCGGAGCAGCGAGGAGCCTGGCG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTGCCACCCAACGCCTATGGGAGAGTATGGAGCGCTCAGATGAGGAAAATCTCAAGGAGGAGTGCAGCAGCACT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAGAGCACCCAGCAGGAGCACGAAGATGCACCTAGCACCAAGCTCCAGGGAGAGGTGCTAGCCCTGGAAGAAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCGGGCTCAGGTGCTGGGGCACGTGGAGCAGCTCAAGGTCCGTGTGAAGGAGCTAGAGCAGCAGCTGCAGGAGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CAGCCCGAGAGGCCGAAATGGAGCGGGCACTGCTGCAGGGAGAGAGGGAGGCAGAGCGGGCACTGCTGCAGAAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAGCAGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTGGAGACAGGCATCCAGAAGGAGAGGGACAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GGAGGCAGAGGCCCTGGAGACTGAGACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAGCGGGAGAGCC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GCGTGGAGGAGGAGCGCGAGCTGGCCGGCCAGGGGCTGCTCCGGAGCAAGGCTGAGCTGCTCCGCAGCATCGCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AAGAGGAAGGAGCGCCTGGCCATCCTGGACAGTCAGGCTGGGCAGATCCGGGCTCAGGCCGTGCAGGAATCAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ACGCCTGGCCCGGGACAAGAATGCCTCCTTACAGCTGCTGCAAAAGGAGAAGGAGAAGCTGACTGTGCTGGAAA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GGAGATACCACTCACTCACAGGGGGCAGGCCTTTCCCGAAGACCACATCGACCCTCAAAGAGGTTTACCGCTCC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAGATGGATGGCGAGGCCACCAGCCCCCTTCCCCGGACCCGCAGCGGCCCCCTCCCCTCCTCCTCTGGCTCTTC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTCCTCCTCCTCCCAGCTCAGCGTGGCTACCCTGGGGCGTAGCCCCTCCCCAAAGAGCGCTCTACTCACCCAGA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ATGGCACGGGCAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATCGAGACCAAGCGCCAACTAGCTCTG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CAGCAGAAGGGACAACAAGTGATTGAAGAGCAGCGGCGGCGACTGGCTGAGCTGAAGCAGAAAGCGGCAGCTGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GGCACAGTGCCAGTGGGATGCCCTTCACGGGGCAGCACCCTTCCCAGCGGGCCCCTCGGGCTTCCCCCCTCTCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TGCACCACTCTATCCTACACCACCTGCCTGCGGGGCGGGAGCGTGGGGAGGAGGGTGAGCACGCCTATGATACG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CTGAGTCTGGAGAGCTCTGACAGCATGGAGACCAGCATCTCCACCGGGGGCAACTCGGCCTGCTCCCCTGACAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CATGTCCAGCGCGAGTGGTCTGGACATGGGGAAGATCGAGGAGATGGAGAAGATGCTGAAAGAGGCTCATGCAG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AGAAGAACCGGCTCATGGAGTCGAGGGAGCGGGAGATGGAGCTGCGGCGGCAGGCCCTGGAGGAGGAGCGGCGG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AGGCGTGAGCAGGTAGAACGGAGGCTGCAGAGTGAGAGTGCCCGGAGGCAGCAGCTGGTCGAGAAGGAGGTCAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GATGCGGGAGAAACAATTTTCCCAGGCACGACCCCTGACCCGCTACCTGCCAATCCGGAAGGAGGACTTTGACC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TGAAGACACATATTGAGTCATCGGGCCATGGTGTTGATACCTGCCTGCACGTGGTGCTCAGCAGCAAGGTCTGC  3774

Query    1  ------------------ATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGTCTTCGACCGGCTCAA  56
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775  CGTGGCTACTTGGTCAAGATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGTCTTCGACCGGCTCAA  3848

Query   57  GCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATTTCCAGGCCATTGAGG  130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849  GCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATTTCCAGGCCATTGAGG  3922

Query  131  AAGTGTACTACGACCACCTGCGCAGTGCAGCCA---------------------------------AGAGCCCG  171
            |||||||||||||||||||||||||||||||||                                 ||||||||
Sbjct 3923  AAGTGTACTACGACCACCTGCGCAGTGCAGCCAAGAAGAGGTTTTTCCGCTTCACTATGGTGACTGAGAGCCCG  3996

Query  172  AACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGGCTGTACTACATGGTGGCCCCATCTGCAGAGGCCAT  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997  AACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGGCTGTACTACATGGTGGCCCCATCTGCAGAGGCCAT  4070

Query  246  GCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGGCTACACTCAGTTCATGAAC  303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071  GCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGGCTACACTCAGTTCATGAAC  4128