Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11690
Subject:
XM_005277680.3
Aligned Length:
4755
Identities:
303
Gaps:
4452

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGCGCCTGGAGGGCGAAGGCGGCGGCCGAGAGGACCCCAGCTCGGCCTGGCGGGCCTCTGGCCACAGCCAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCACCGCTTGGGCCGAGGCCGAGGCCGACCCCCAGGGACACAGGAGCTCTGGAGCCTTAGGACCATGGACGCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAATAGGAACCAAATAGGCCCTGGATGCCAGACCCAGACCATGGTGCAGAAAGGACCCTTGGACCTGATCGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGGCAAAGGGCTGAAAGTGCAAACGGACAAACCCCACCTGGTGAGCCTGGGCAGTGGGCGACTCAGCACAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CATCACCCTCCTGCCGCTGGAGGAAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCACTACAGGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGCCTGGCTCCAGAGCACTGCTACATCGAGAACCTGCGGGGCACCCTCACCCTCTACCCCTGTGGCAATGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCACTATTGATGGGCTCCCTGTCCGGCAGCCTACCCGGCTCACTCAGGGCTGCATGTTGTGCCTGGGTCAGTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CACCTTCCTTCGCTTTAACCACCCGGCTGAAGCCAAGTGGATGAAAAGCATGATTCCAGCAGGGGGCCGAGCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGGGCCCCCCTACAGCCCTGTTCCTGAATCAGAAAGTCTGGTAAATGGGAACCACACCCCACAGACTGCAACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGGGACCCTCTGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAGAAGGACCTGCAAGAGATCATGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTCACTGGTGCTAGAGGAGCCTGGAGCTGCTGGCAAGAAGCCTGCCGCAACCTCTCCACTGTCACCGATGGCTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGGTGGGCGCTACCTGCTGTCTCCCCCAACCAGCCCCGGCGCCATGTCTGTGGGCTCCAGCTATGAGAACACC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTCCAGCCTTCTCTCCACTCTCTTCACCAGCCAGCAGTGGAAGCTGTGCCAGTCACTCACCCAGTGGGCAAGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCCAGGACCTTCTGTGCCCCCGCTGGTACCTGCCCGTTCCTCCAGCTACCATCTGGCCCTACAGCCCCCACAGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCCGCCCAAGTGGTGCTCGCTCCGAGAGTCCTCGGCTGAGCAGGAAAGGGGGCCATGAGAGGCCTCCCAGCCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCCTCCGGGGTCTGCTGACAGACAGCCCTGCAGCTACTGTCTTGGCGGAGGCCCGGAGAGCCACTGAGAGCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCGGCTGGGTGGGCAGCTGCCTGTGGTGGCCATCAGCCTGAGTGAATACCCAGCTTCTGGTGCTCTCAGTCAAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCACCAGCATTCCTGGCAGCCCCAAGTTTCAGCCTCCAGTCCCTGCTCCCCGAAACAAGATTGGCACACTCCAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GACCGCCCTCCCAGCCCTTTCCGTGAGCCTCCAGGCAGTGAGCGGGTGCTAACAACCAGCCCCTCACGCCAACT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGTGGGCCGAACATTTTCAGATGGGTTAGCCACCCGTACCCTGCAGCCTCCTGAGAGTCCCCGCCTGGGCCGGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGGGCCTGGACAGTATGCGAGAACTACCCCCCTTAAGTCCATCTCTGTCCCGGCGAGCTCTCTCCCCGCTGCCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACCCGGACCACCCCAGATCCCAAGCTAAACAGGGAAGTGGCAGAGAGTCCTCGGCCCCGGCGCTGGGCAGCCCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGGGCTTCACCAGAGGACTTCTCCCTGACGCTGGGGGCACGGGGCCGTAGGACACGGAGCCCCTCACCCACAC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGGGTGAGTCTCTGGCACCCCACAAGGGCAGCTTCAGTGGCAGGCTGAGCCCAGCCTACAGTCTGGGCTCTCTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCAGAGGAAGCTCTCCAGCGGGGACTTGCGGGTGCCTGTCAC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AAGGGAGCGGAAAAATAGCATCACAGAGATCAGTGACAATGAGGACGACCTCCTGGAGTACCACCGGCGACAGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCATCCTGAACCTGTGT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCCGAATACAGCCGGGCTGATGGGGGACCTGAGGCTGGGGAGCTTCCCAGCATTGGGGAGGCCACCGCAGCATT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGCACTGGCAGGCCGGAGGCCCTCACGAGGCCTTGCAGGGGCCTCTGGGCGGAGCAGCGAGGAGCCTGGCGTTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCACCCAACGCCTATGGGAGAGTATGGAGCGCTCAGATGAGGAAAATCTCAAGGAGGAGTGCAGCAGCACTGAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AGCACCCAGCAGGAGCACGAAGATGCACCTAGCACCAAGCTCCAGGGAGAGGTGCTAGCCCTGGAAGAAGAGCG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGCTCAGGTGCTGGGGCACGTGGAGCAGCTCAAGGTCCGTGTGAAGGAGCTAGAGCAGCAGCTGCAGGAGTCAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CCCGAGAGGCCGAAATGGAGCGGGCACTGCTGCAGGGAGAGAGGGAGGCAGAGCGGGCACTGCTGCAGAAGGAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTGGAGACAGGCATCCAGAAGGAGAGGGACAAGGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GAGGGCGGAGCTGGCCGCGGGACGGAGGCACCTGGAGGCCCGCCAGGCGCTCTACGCCGAGCTCCAGACGCAGC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TCGATAACTGCCCCGAGTCAGTGCGGGAACAGTTACAGGAGCAGCTGAGAAGGGAGGCAGAGGCCCTGGAGACT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAGACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAGCGGGAGAGCCGCGTGGAGGAGGAGCGCGAGCT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGCCGGCCAGGGGCTGCTCCGGAGCAAGGCTGAGCTGCTCCGCAGCATCGCCAAGAGGAAGGAGCGCCTGGCCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TCCTGGACAGTCAGGCTGGGCAGATCCGGGCTCAGGCCGTGCAGGAATCAGAACGCCTGGCCCGGGACAAGAAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCCTCCTTACAGCTGCTGCAAAAGGAGAAGGAGAAGCTGACTGTGCTGGAAAGGAGATACCACTCACTCACAGG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GGGCAGGCCTTTCCCGAAGACCACATCGACCCTCAAAGAGGCCGAGCTGCTCATCTCCGAGTCCTCAGAGATGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GGCTGGGGACTAAGGCTCTGGGCCTTTTCCCAGGGTCTTCTCAGGCTGGGGCCTCCTCTGTCTCTTTAACCCCA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CCTGCTTCCACTCTTCTCTGCCCCAAAGCACAAGAGTACGTGATGCTTGAGCAGCTAAAGGTGATGCGGGGCAC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CTCGCCCATGCCCCCAGCCCCTGTGCCAGGCCTTTCTCCCTGGGCCTCCGCCTCCCGGGACCTGGTTCCCACCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CCTGCCTTCCTCCCATGCTGCCCTCCTCCTCGTTCGCTTCCATCACGCCTTCACCTAAGATGGAGAAGCTGCTG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CTCCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGCTGATGGCCGGGCTGGGGACTGGCCCCGCTGCAGCCTC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CCCTCACTCTTCTCCCCCGCCTCTGCCCGCCAAAGCTTCCCGTCAGCTGCAGGTTTACCGCTCCAAGATGGATG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GCGAGGCCACCAGCCCCCTTCCCCGGACCCGCAGCGGCCCCCTCCCCTCCTCCTCTGGCTCTTCCTCCTCCTCC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TCCCAGCTCAGCGTGGCTACCCTGGGGCGTAGCCCCTCCCCAAAGAGCGCTCTACTCACCCAGAATGGCACGGG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATCGAGACCAAGCGCCAACTAGCTCTGCAGCAGAAGG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TCGAGTCGCTTCCCGCCGAGCCCCTCCCAACCGACGACCCAGCAGGACAACAAGTGATTGAAGAGCAGCGGCGG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CGACTGGCTGAGCTGAAGCAGAAAGCGGCAGCTGAGGCACAGTGCCAGTGGGATGCCCTTCACGGGGCAGCACC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CTTCCCAGCGGGCCCCTCGGGCTTCCCCCCTCTCATGCACCACTCTATCCTACACCACCTGCCTGCGGGGCGGG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AGCGTGGGGAGGAGGGTGAGCACGCCTATGATACGCTGAGTCTGGAGAGCTCTGACAGCATGGAGACCAGCATC  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  TCCACCGGGGGCAACTCGGCCTGCTCCCCTGACAACATGTCCAGCGCGAGTGGTCTGGACATGGGGAAGATCGA  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  GGAGATGGAGAAGATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGGAGTCGAGGGAGCGGGAGATGG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  AGCTGCGGCGGCAGGCCCTGGAGGAGGAGCGGCGGAGGCGTGAGCAGGTAGAACGGAGGCTGCAGAGTGAGAGT  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  GCCCGGAGGCAGCAGCTGGTCGAGAAGGAGGTCAAGATGCGGGAGAAACAATTTTCCCAGGCACGACCCCTGAC  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  CCGCTACCTGCCAATCCGGAAGGAGGACTTTGACCTGAAGACACATATTGAGTCATCGGGCCATGGTGTTGATA  4366

Query    1  -----------------------------------------------------ATGGGCGGCAAGATTAAATCA  21
                                                                 |||||||||||||||||||||
Sbjct 4367  CCTGCCTGCACGTGGTGCTCAGCAGCAAGGTCTGCCGTGGCTACTTGGTCAAGATGGGCGGCAAGATTAAATCA  4440

Query   22  TGGAAGAAGCGCTGGTTTGTCTTCGACCGGCTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAA  95
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  TGGAAGAAGCGCTGGTTTGTCTTCGACCGGCTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAA  4514

Query   96  GCTGAAGGGAGTCATCTATTTCCAGGCCATTGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCCA------  163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 4515  GCTGAAGGGAGTCATCTATTTCCAGGCCATTGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCCAAGAAGA  4588

Query  164  ---------------------------AGAGCCCGAACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGG  210
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589  GGTTTTTCCGCTTCACTATGGTGACTGAGAGCCCGAACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGG  4662

Query  211  CTGTACTACATGGTGGCCCCATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGG  284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663  CTGTACTACATGGTGGCCCCATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGG  4736

Query  285  CTACACTCAGTTCATGAAC  303
            |||||||||||||||||||
Sbjct 4737  CTACACTCAGTTCATGAAC  4755