Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11690
Subject:
XM_011542710.2
Aligned Length:
4587
Identities:
303
Gaps:
4284

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGCGCCTGGAGGGCGAAGGCGGCGGCCGAGAGGACCCCAGCTCGGCCTGGCGGGCCTCTGGCCACAGCCAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCACCGCTTGGGCCGAGGCCGAGGCCGACCCCCAGGGACACAGGAGCTCTGGAGCCTTAGGACCATGGACGCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAATAGGAACCAAATAGGCCCTGGATGCCAGACCCAGACCATGGTGCAGAAAGGACCCTTGGACCTGATCGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGGCAAAGGGCTGAAAGTGCAAACGGACAAACCCCACCTGGTGAGCCTGGGCAGTGGGCGACTCAGCACAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CATCACCCTCCTGCCGCTGGAGGAAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCACTACAGGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGCCTGGCTCCAGAGCACTGCTACATCGAGAACCTGCGGGGCACCCTCACCCTCTACCCCTGTGGCAATGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCACTATTGATGGGCTCCCTGTCCGGCAGCCTACCCGGCTCACTCAGGGCTGCATGTTGTGCCTGGGTCAGTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CACCTTCCTTCGCTTTAACCACCCGGCTGAAGCCAAGTGGATGAAAAGCATGATTCCAGCAGGGGGCCGAGCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGGGCCCCCCTACAGCCCTGTTCCTGCAGAATCAGAAAGTCTGGTAAATGGGAACCACACCCCACAGACTGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACACGGGGACCCTCTGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAGAAGGACCTGCAAGAGATCAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGACTCACTGGTGCTAGAGGAGCCTGGAGCTGCTGGCAAGAAGCCTGCCGCAACCTCTCCACTGTCACCGATGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTAATGGTGGGCGCTACCTGCTGTCTCCCCCAACCAGCCCCGGCGCCATGTCTGTGGGCTCCAGCTATGAGAAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCTCTCCAGCCTTCTCTCCACTCTCTTCACCAGCCAGCAGTGGAAGCTGTGCCAGTCACTCACCCAGTGGGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGCCAGGACCTTCTGTGCCCCCGCTGGTACCTGCCCGTTCCTCCAGCTACCATCTGGCCCTACAGCCCCCAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGTCCCGCCCAAGTGGTGCTCGCTCCGAGAGTCCTCGGCTGAGCAGGAAAGGGGGCCATGAGAGGCCTCCCAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTGGCCTCCGGGGTCTGCTGACAGACAGCCCTGCAGCTACTGTCTTGGCGGAGGCCCGGAGAGCCACTGAGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCCCCGGCTGGGTGGGCAGCTGCCTGTGGTGGCCATCAGCCTGAGTGAATACCCAGCTTCTGGTGCTCTCAGTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AACCCACCAGCATTCCTGGCAGCCCCAAGTTTCAGCCTCCAGTCCCTGCTCCCCGAAACAAGATTGGCACACTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGGACCGCCCTCCCAGCCCTTTCCGTGAGCCTCCAGGCAGTGAGCGGGTGCTAACAACCAGCCCCTCACGCCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTGGTGGGCCGAACATTTTCAGATGGGTTAGCCACCCGTACCCTGCAGCCTCCTGAGAGTCCCCGCCTGGGCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCGGGGCCTGGACAGTATGCGAGAACTACCCCCCTTAAGTCCATCTCTGTCCCGGCGAGCTCTCTCCCCGCTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCCACCCGGACCACCCCAGATCCCAAGCTAAACAGGGAAGTGGCAGAGAGTCCTCGGCCCCGGCGCTGGGCAGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCATGGGGCTTCACCAGAGGACTTCTCCCTGACGCTGGGGGCACGGGGCCGTAGGACACGGAGCCCCTCACCCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CACTGGGTGAGTCTCTGGCACCCCACAAGGGCAGCTTCAGTGGCAGGCTGAGCCCAGCCTACAGTCTGGGCTCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTTACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCAGAGGAAGCTCTCCAGCGGGGACTTGCGGGTGCCTGT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CACAAGGGAGCGGAAAAATAGCATCACAGAGATCAGTGACAATGAGGACGACCTCCTGGAGTACCACCGGCGAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCATCCTGAACCTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTGCCGAATACAGCCGGGCTGATGGGGGACCTGAGGCTGGGGAGCTTCCCAGCATTGGGGAGGCCACCGCAGC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATTGGCACTGGCAGGCCGGAGGCCCTCACGAGGCCTTGCAGGGGCCTCTGGGCGGAGCAGCGAGGAGCCTGGCG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTGCCACCCAACGCCTATGGGAGAGTATGGAGCGCTCAGATGAGGAAAATCTCAAGGAGGAGTGCAGCAGCACT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAGAGCACCCAGCAGGAGCACGAAGATGCACCTAGCACCAAGCTCCAGGGAGAGGTGCTAGCCCTGGAAGAAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCGGGCTCAGGTGCTGGGGCACGTGGAGCAGCTCAAGGTCCGTGTGAAGGAGCTAGAGCAGCAGCTGCAGGAGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CAGCCCGAGAGGCCGAAATGGAGCGGGCACTGCTGCAGGGAGAGAGGGAGGCAGAGCGGGCACTGCTGCAGAAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAGCAGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTGGAGACAGGCATCCAGAAGGAGAGGGACAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GGAGAGGGCGGAGCTGGCCGCGGGACGGAGGCACCTGGAGGCCCGCCAGGCGCTCTACGCCGAGCTCCAGACGC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGCTCGATAACTGCCCCGAGTCAGTGCGGGAACAGTTACAGGAGCAGCTGAGAAGGGAGGCAGAGGCCCTGGAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACTGAGACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAGCGGGAGAGCCGCGTGGAGGAGGAGCGCGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GCTGGCCGGCCAGGGGCTGCTCCGGAGCAAGGCTGAGCTGCTCCGCAGCATCGCCAAGAGGAAGGAGCGCCTGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCATCCTGGACAGTCAGGCTGGGCAGATCCGGGCTCAGGCCGTGCAGGAATCAGAACGCCTGGCCCGGGACAAG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AATGCCTCCTTACAGCTGCTGCAAAAGGAGAAGGAGAAGCTGACTGTGCTGGAAAGGAGATACCACTCACTCAC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGGGGGCAGGCCTTTCCCGAAGACCACATCGACCCTCAAAGAGGCCGAGCTGCTCATCTCCGAGTCCTCAGAGA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TGGGGCTGGGGACTAAGGCTCTGGGCCTTTTCCCAGGGTCTTCTCAGGCTGGGGCCTCCTCTGTCTCTTTAACC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CCACCTGCTTCCACTCTTCTCTGCCCCAAAGCACAAGAGATGGAGAAGCTGCTGCTCCCTGCTGTAGACTTAGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GCAGTGGTACCAGGAGCTGATGGCCGGGCTGGGGACTGGCCCCGCTGCAGCCTCCCCTCACTCTTCTCCCCCGC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTCTGCCCGCCAAAGCTTCCCGTCAGCTGCAGGTTTACCGCTCCAAGATGGATGGCGAGGCCACCAGCCCCCTT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCCCGGACCCGCAGCGGCCCCCTCCCCTCCTCCTCTGGCTCTTCCTCCTCCTCCTCCCAGCTCAGCGTGGCTAC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CCTGGGGCGTAGCCCCTCCCCAAAGAGCGCTCTACTCACCCAGAATGGCACGGGCAGCCTTCCTCGCAACCTGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CAGCCACACTGCAGGACATCGAGACCAAGCGCCAACTAGCTCTGCAGCAGAAGGTCGAGTCGCTTCCCGCCGAG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CCCCTCCCAACCGACGACCCAGCAGGACAACAAGTGATTGAAGAGCAGCGGCGGCGACTGGCTGAGCTGAAGCA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GAAAGCGGCAGCTGAGGCACAGTGCCAGTGGGATGCCCTTCACGGGGCAGCACCCTTCCCAGCGGGCCCCTCGG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GCTTCCCCCCTCTCATGCACCACTCTATCCTACACCACCTGCCTGCGGGGCGGGAGCGTGGGGAGGAGGGTGAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CACGCCTATGATACGCTGAGTCTGGAGAGCTCTGACAGCATGGAGACCAGCATCTCCACCGGGGGCAACTCGGC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CTGCTCCCCTGACAACATGTCCAGCGCGAGTGGTCTGGACATGGGGAAGATCGAGGAGATGGAGAAGATGCTGA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AAGAGGCTCATGCAGAGAAGAACCGGCTCATGGAGTCGAGGGAGCGGGAGATGGAGCTGCGGCGGCAGGCCCTG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  GAGGAGGAGCGGCGGAGGCGTGAGCAGGTAGAACGGAGGCTGCAGAGTGAGAGTGCCCGGAGGCAGCAGCTGGT  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  CGAGAAGGAGGTCAAGATGCGGGAGAAACAATTTTCCCAGGCACGACCCCTGACCCGCTACCTGCCAATCCGGA  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  AGGAGGACTTTGACCTGAAGACACATATTGAGTCATCGGGCCATGGTGTTGATACCTGCCTGCACGTGGTGCTC  4218

Query    1  ---------------------------------ATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGT  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  AGCAGCAAGGTCTGCCGTGGCTACTTGGTCAAGATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGT  4292

Query   42  CTTCGACCGGCTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATT  115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293  CTTCGACCGGCTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATT  4366

Query  116  TCCAGGCCATTGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCCA--------------------------  163
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct 4367  TCCAGGCCATTGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCCAAGAAGAGGTTTTTCCGCTTCACTATG  4440

Query  164  -------AGAGCCCGAACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGGCTGTACTACATGGTGGCCCC  230
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  GTGACTGAGAGCCCGAACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGGCTGTACTACATGGTGGCCCC  4514

Query  231  ATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGGCTACACTCAGTTCATGAAC  303
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515  ATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGGCTACACTCAGTTCATGAAC  4587

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