Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11737
- Subject:
- XR_001748648.2
- Aligned Length:
- 5404
- Identities:
- 1762
- Gaps:
- 3630
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTCAGCTCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAGCGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTGCGCGCCCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAGAGCTCACCTGGTGCCAGGTAACAGGCCTGGCCTCGCCCTGTGGATGATGATGGCCTTGCCCCCGTGAGC 222
Query 1 ------------------------------------------ATGCGGCTGTGGAAGGCGGTGGTGGTGACTTT 32
||||||||||||||||||||||||||||||||
Sbjct 223 TACAACCTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGTGGAAGGCGGTGGTGGTGACTTT 296
Query 33 GGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGG 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGG 370
Query 107 AGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTG 444
Query 181 CTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGT 518
Query 255 CATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGC 592
Query 329 CCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGG 666
Query 403 TGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCC 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCC 740
Query 477 TGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCG 814
Query 551 ACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTAC 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTAC 888
Query 625 ACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTG 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTG 962
Query 699 CCTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGA 772
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGCTGGCCATTG--------------GCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGA 1022
Query 773 ACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACA 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 ACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACA 1096
Query 847 GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT 1170
Query 921 CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCA 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCA 1244
Query 995 CCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAG 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1245 CCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAG 1318
Query 1069 GTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT 1392
Query 1143 CGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGG 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 CGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGG 1466
Query 1217 CAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTAC 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1467 CAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTAC 1540
Query 1291 GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCT 1614
Query 1365 GGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCTGATGCAGGGAGTGGGGGCTGCTGAGAAGGTGT 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 GGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCTGATGCAGGGAGTGGGGGCTGCTGAGAAGGTGT 1688
Query 1439 TCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGTG 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1689 TCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGTG 1762
Query 1513 GACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAGCCT 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1763 GACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAGCCT 1836
Query 1587 GTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGA 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1837 GTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGA 1910
Query 1661 ACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1911 ACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTG 1984
Query 1735 CACCGTGTGGTAT-----GTG---CACGGGCCTGGGC----------------CAC-----ACTTCTCC----- 1774
|||||||||.|.| ||| ||.|.|||.|.|| ||| ||.|||||
Sbjct 1985 CACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAACATCTCCTACGG 2058
Query 1775 ---GCCCTTTCTGCATC--------------------------------------------------------- 1788
||||..|.|||.|.
Sbjct 2059 CCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCCACGGCTTCATCATGGAAC 2132
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2133 TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGCC 2206
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2207 ATGGCCCGGGCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGATGAAGCCACCAGCGCTTTGGATGCCGAGAG 2280
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2281 CGAGTATCTGATCTGAATGACCAGCCTGCAGATATCAGAACCGAGATGGATTGATGATGATGACAATGATAACC 2354
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2355 ATTCAGTTGTCACTAAGGGCTGCTTGTTGCACCTCAGGAGCTGGGGATAGTGAAGGAGATACCTGTGCTGAGTC 2428
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2429 ACTAACAGGAAAGGGCTGAGAAAGAAGCATCGCCAATGGTTTCTCTTTCCTGGTTTTTATTCTTTCCTCAGAGA 2502
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2503 GGAGGAAGTTGACCATTTAAACAGGTGAGTTGGCTGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGG 2576
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2577 AGGCCGAGGCAGGCGGACCACTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAAACTCATCTCT 2650
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2651 ACTAAAAACACAAAAATTAGCCAGGTGTGGTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGA 2724
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2725 GGTGGCAGTGAGCCGAGATTGTGCCTCTGAACTCCAGCCTGGACGACAGAGTGAGACTCCATCTAAAATAAATA 2798
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2799 AATAAATAAATAAATAAATAAATAAATAAATAAACAAACAAACAGATGAGTCACCCAGGGGGAGGTCCTAACAG 2872
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2873 CGACCTAAGGTGACAGTGACAGTGCCTCACATTATTACAGCTCTTTACCTTTGACTACCTGAGATCAGTCATTC 2946
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2947 AGTAAGCATTTATTGAGAACCTCCGTCTACCAGAAACTGTGCTAGGTTGTGGGTCACAGTGGAGACTAAGAGGT 3020
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3021 CCGAGATCACCTACATCCTACTGGGTAATAAACTCCAGATGGTGAAAAGATGGCAGCAGACAAGAGAGTGACTT 3094
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3095 GGGAGAGGAGCACTGTTTGAGCTGGGGTGGTCTGGGGAGGTGATATGGGAGCTGAGCCCTGAATGACAAGGAGG 3168
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3169 TACCAGCTTTGGGTATCTAGAGGAAAGAATGATCCCAACCACAGTCTGGCACTTCCTCAAAAAGCTCAACATGG 3242
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3243 ACCTGGGCACAGTGGCTCACAGTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATTGCTTGAAGCCAG 3316
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3317 GAGTTTGAGAACAGCCTGGGCAACATAGTGGGACCCCATCCCTACAAAAATTTAAAAATCAGCCAGGCGTGGTA 3390
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3391 GTGCATACCGGTCGTCCCAGCTACTTGTGTGGCTGAGGCAGGAGGATCCTTTGAGCTCAAGGAGGTTGAGGCTG 3464
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3465 CAACGAACCATGGTGGTGCCACTGCACTCCAGCCTGGATGACAGAGTGAGACCTCGTCTCTAAAAATAATAAAA 3538
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3539 TAAAGCCAAAAAGTGCAAACAATCCAATGTATGAATGGATAAACAAACTGCAAACCGTGGTATGCACATACTGT 3612
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3613 GGGATATGATTCAGCTGTAGAAAGGAATGAAGTGCTGGTACATGCTATAACATAGATGGTCCTTAGAAGCATTA 3686
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3687 TGCAAATGAAAGATGCCAGGCAGGGAAGGTCACCTATGGTATGATTCTTTTTACATGATATATTCAGAAGAAGC 3760
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3761 AAATCTATAGGGATAGAAAGCAGATTAGAGGTTACCAGGGCATGGGGAGGGAGGAATGGGGAGTGACTGCTTGC 3834
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3835 TGGATACAAGATGTTTTTTACAGGGTGATGAGAAAGTTTGGAAGCTGGAGAGACCTGGTGTTTGCACAATATTG 3908
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3909 TGAATACATTTAATACCAATGCATTTGTACACTTTAAAATGGGTAAGTGGCCAGGTGCAATGGCTCATGCCTGT 3982
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3983 AATCCCAGCACTTTAGGAGGCCGAAGTGGGAGGATCGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACAT 4056
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4057 AGGGAGACCCCATCTCTACAAAAAATAAAATATTAGTCGTGCGTGGTGGCCTGTGCCTATAGTCCCAGTTACTT 4130
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4131 CACAGACTGAGGGGGGATGATTGCTGGGCCCAGGAGTTTGAGGCTGGAGTGAGCCATGATTGTACCACTGCACT 4204
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4205 TCAGCCTGGGTGACAGATTGAGACTCTGTCTCAAAAATAAAAAAGAAAAAAAGGTTAAGTGCATGTCATGTGAA 4278
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4279 TTTCACCTCATCAAGGAAAAAAAAAAAAGATAAGTAGGGGAGGAGATGGATCCCACAAAGGATTGTGAAGTACA 4352
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4353 GAGACCTCCAGACAGCAAGAGGTGGGACATCTGCCAAGCAGGACACGGCCAGGGGACAGAGTGGGGGGCACCCA 4426
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4427 AGGGAGGAAGGAGGAGGGGACAGGAAGGCGAGGGCTCCTGGGGCCATGGCGAGGTAGTTGACTTTTATTTCATG 4500
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4501 AAAACTGGGGGCATTGAAGGGTTCTGATCAGGGCGTGACCTGATTGATCCTTGGGCTCAGTGTGGAGAAGGTAC 4574
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4575 TGGACGAGGACCCAGAGAAGTGGCTCCCCCAACACCCCGGGCAGCCAGGCCTGGGCTCACCCCACTCTGTAGAT 4648
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4649 AAGGAAATGCTGCCTGCAGAGGCTGCAGCCACGGTCTCATCGCCAAACCTTCTGCAACCCTTATTCAGCATGTC 4722
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4723 CTGCTGTTATTTATAGCTGAAGGAACCTTGCGAGTGGAGGGTGCATGGAGAAATGCTTCAAGGAATTTTCTGCT 4796
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4797 CTGCATACAGCAACAAGCAGTGGCCAGCAAGGGCCCCGGGGCAGCAGCACAGGCCCACACAGACATGCAATAGA 4870
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4871 GGTCCTTTACCTCCCCTGGACCCAGGTCCATGCTGGGCACGCCCTGGCTGGGAAGAACTAATTCAGGGCAGTTA 4944
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4945 CACAAGCGCTGCCCGAGGCCCTGTGTTGACAAGGCCTGGTCAGCTGCCAGATAAATTCCTTACCTCTGGTCCTT 5018
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5019 AATGATCTGGCTTTTCTGGACAATCCATGGCCTAAAGAAAGGGAAGATTCTTTTCAAACTGGAGCCTGGCTGGA 5092
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5093 GGCCATGAGACCGTAGTGGTGACTGATGTGTGCTGGCTCTGGCTGAGGACAGGCTTCTCCAGAACAGGAAGATG 5166
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5167 GCTGCTTTGGGGACATCTGGATTGGACATCCTTCATGCCCCACTGCCACCAGGCAGTCTCCCCTGATTTCTCAC 5240
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5241 TACCATAGCTGGTCTCCTCCATCTTCATTTATTTGGCCTGTGTGGGCTTTTCTAGCATGTTGTTTGCTCTTCAA 5314
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5315 ACACTCTAGGAATTTCTTAAAGGCTGGTACCTGTGTCCTCATGTAGCAGGTGTGCTCCCTGCTCACAGTAGGTG 5388
Query 1789 -- 1788
Sbjct 5389 CT 5390
