Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11765
Subject:
XM_017028747.2
Aligned Length:
1565
Identities:
830
Gaps:
721

Alignment

Query    1  ATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAG------------  62
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct    1  ATGGCCAGCGACGGGGCCAGGAAGCAATTCTGGAAGCGCAGCAACAGCAAGCTCCCGGGCAGCATCCAGCACGT  74

Query   63  ---------------------------------------------TTTGCTCAGGTCCACGGCCAAGATGCCGA  91
                                                         |||||||||||||||||||||||||||||
Sbjct   75  GTATGGTGCCCAGCACCCCCCCTTTGATCCACTGTTACATGGCACTTTGCTCAGGTCCACGGCCAAGATGCCGA  148

Query   92  CCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCTGGGACGCT  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCACACCAGTGAAGGCCAAGAGGGTCAGCACCTTCCAGGAGTTTGAGAGCAATACCAGCGATGCCTGGGACGCT  222

Query  166  GGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAGACGGCCAA  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGGAGGACGACGATGAGCTCCTGGCCATGGCGGCGGAGAGCCTGAACTCCGAGGTGGTCATGGAGACGGCCAA  296

Query  240  CCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCAGCAGAAGC  313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCGTGTGCTGCGTAACCACAGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGGGCTTCAGCAGAAGC  370

Query  314  CCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTGAGAGCCAC  387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCAGGCCCGAGGCAGAGCCGCCCTCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAGTGAGAGCCAC  444

Query  388  ACGTCCTGTCCTGCA-----------------------------------------------------------  402
            |||||||||||||||                                                           
Sbjct  445  ACGTCCTGTCCTGCAGAAAGTGCCAGCGATGCCGCCCCTCTGCAGAGGTCCCAGTCTCTCCCACACTCGGCCAC  518

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  519  CGTCACGCTGGGTGGCACATCTGACCCCAGCACTCTCAGCAGCTCAGCGCTGAGCGAAAGAGAGGCCTCCCGGC  592

Query  403  --------------------------------------------GAGGAATTACGGAGGTTGAGCTGGTCCGGA  432
                                                        ||||||||||||||||||||||||||||||
Sbjct  593  TCGACAAGTTCAAGCAGCTGCTTGCCGGCCCCAACACGGACCTTGAGGAATTACGGAGGTTGAGCTGGTCCGGA  666

Query  433  ATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGACCGGAGACC  506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATCCCTAAGCCAGTGCGTCCAATGACGTGGAAGCTCCTCTCAGGTTACCTTCCCGCCAATGTAGACCGGAGACC  740

Query  507  AGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAACGACGAAG  580
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGCCACTCTCCAGAGAAAACAAAAAGAATATTTTGCATTTATTGAGCACTATTACGATTCTAGGAACGACGAAG  814

Query  581  TTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCCTGCAGCCC  654
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTCACCAGGACACATACAGGCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGTTGATCCTGCAGCCC  888

Query  655  AAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATACGTTCAGGG  728
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGGTGACGGAGATTTTTGAAAGGATCTTGTTCATATGGGCGATCCGCCACCCAGCCAGTGGATACGTTCAGGG  962

Query  729  TATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATACATAGAGGCAGAGGAGGTGGACACGG  802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct  963  TATAAATGATCTCGTCACTCCTTTCTTTGTGGTCTTCATTTGTGAATACATAGA--------------------  1016

Query  803  TGGACGTCTCCGGCGTGCCCGCAGAGGTGCTGT-GCA---ACATCG--AGGC-----CGACACCTACTGGTGCA  865
            ||.||.|      |.|.|..|.|.||.||||.| |.|   ||| ||  ||||     |.|||     ||| |||
Sbjct 1017  TGTACTT------CATTCATGGATAGATGCTTTAGTATTCACA-CGCAAGGCTGCTTCCACA-----TGG-GCA  1077

Query  866  TGAGC---AAGCTGCTGGATGGCATTCAGGACAACTACACCTTTGCCCAACCTGGGATTCAAATGAAAGTGAAA  936
            .||||   |||.|||                                                           
Sbjct 1078  CGAGCTCAAAGATGC-----------------------------------------------------------  1092

Query  937  ATGTTAGAAGAACTCGTGAGCCGGATTGATGAGCAAGTGCACCGGCACCTGGACCAACACGAAGTGAGATACCT  1010
                                                                                      
Sbjct 1093  --------------------------------------------------------------------------  1092

Query 1011  GCAGTTTGCCTTCCGCTGGATGAACAACCTGCTGATGAGGGAGGTGCCCCTGCGTTGTACCATCCGCCTGTGGG  1084
                                                                                      
Sbjct 1093  --------------------------------------------------------------------------  1092

Query 1085  ACACCTACCAGTCTGAACCGGACGGCTTTTCTCATTTCCACTTGTACGTGTGCGCTGCTTTTCTCGTGAGATGG  1158
                                                                                      
Sbjct 1093  --------------------------------------------------------------------------  1092

Query 1159  AGGAAGGAAATACTAGAAGAAAAAGATTTTCAAGAGCTGCTGCTCTTCCTCCAGAACCTGCCCACAGCCCACTG  1232
                                                                                      
Sbjct 1093  --------------------------------------------------------------------------  1092

Query 1233  GGATGATGAGGACATCAGCCTGTTGCTGGCCGAGGCCTACCGCCTCAAGTTTGCTTTTGCCGACGCCCCCAATC  1306
                                                                                      
Sbjct 1093  --------------------------------------------------------------------------  1092

Query 1307  ACTACAAGAAA  1317
                       
Sbjct 1093  -----------  1092

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