Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11816
- Subject:
- NM_001366051.2
- Aligned Length:
- 2316
- Identities:
- 1297
- Gaps:
- 1014
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACCGGCTCAGAAACGCCAAAATCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCTTTACAATCCAAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAGGGGCTGGGTGGAGAAGAAGATGGTCCATCGCTCAGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACCCTGCTGCCACCCCAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGTGACACCACTGAGGATGAGGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTCGATGATTTACTGAAATTTGATGACCTAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAACACATGCTCTGATGGTGGGTCTATGTCTCAATCTCCGGAATTTGCCGTGGTTTGATGAGGTTGATGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTCCTTCTTCCCACGCTGCTACTGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGAGGACTTCTGGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCAGTAGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAGGCCTCAGGAGACAAGCAGCCCAAGAAACAGGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATG 592
Query 1 --------------------------------------------ATGGACATCGACAAGGACCTGGAGGCCCCG 30
||||||||||||||||||||||||||||||
Sbjct 593 AAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCG 666
Query 31 CTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACT 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACT 740
Query 105 CAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAG 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAG 814
Query 179 ACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGTGGACGAGGCATCATGTGCATG 252
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 815 ACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATG 888
Query 253 GACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCA 962
Query 327 GAAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACAGTGGTTCCTGGTAACTGACT 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACAGTGGTTCCTGGTAACTGACT 1036
Query 401 GGAACCCACTTACCGTGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAAC 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGAACCCACTTACCGTGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAAC 1110
Query 475 CTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACT 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACT 1184
Query 549 GCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTT 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTT 1258
Query 623 GGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAA 696
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1259 GGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAG 1332
Query 697 TGTCGGAAGGCCAGCTTTGAGCTCTATGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGTCGGAAGGCCAGCTTTGAGCTCTATGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGA 1406
Query 771 GATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACA 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACA 1480
Query 845 CCCTGCGCGTGGTCATTGACCGGAGGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAG 918
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAG 1554
Query 919 CCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATCAAGAAGCCCATGGC 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATCAAGAAGCCCATGGC 1628
Query 993 GATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGCCCGTC 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGGGGAAGCCCGTC 1702
Query 1067 ACCACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCATGTACTCCGACACCAGGGCCAGGTCCTC 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACCACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCATGTACTCCGACACCAGGGCCAGGTCCTC 1776
Query 1141 AGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACCCAC 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACCCAC 1850
Query 1215 GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGG 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGG 1924
Query 1289 ------------TGGGCCT-CGA-----CCTG------------------------------------------ 1302
||.|||| ||| ||.|
Sbjct 1925 CTCCTGCTCTCCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAA 1998
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1999 TTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGC 2072
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2073 CTGCCCCATGAAGAGGCTGAGCCCCCTGAAACCCCTGCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGG 2146
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2147 GGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAG 2220
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2221 AAACAAGTGAAGTATTTGGGGCTTGACTCCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGAGGCCGTGTAC 2294
Query 1303 ---------------------- 1302
Sbjct 2295 CCCAGGGTCCACAGCAAGAGCC 2316
