Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11838
- Subject:
- XR_001744630.1
- Aligned Length:
- 1786
- Identities:
- 635
- Gaps:
- 1107
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAAGGCTCCTCAGCCGAGCGCCGAGCGGTCGATCGCCGTAGCTCCCGCAGCCTGCGATCTCCAGTCTGTGGCTC 74
Query 1 ------------------------------ATGGAGCATGCCTTTACCCCGTTGGAGCCCCTGCTTTCCACTGG 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTACCAGCCATTGTAGGCCAATAATCCGTTATGGAGCATGCCTTTACCCCGTTGGAGCCCCTGCTTTCCACTGG 148
Query 45 GAATTTGAAGTACTGCCTTGTAATTCTTAATCAGCCTTTGGACAACTATTTTCGTCATCTTTGGAACAAAGCTC 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAATTTGAAGTACTGCCTTGTAATTCTTAATCAGCCTTTGGACAACTATTTTCGTCATCTTTGGAACAAAGCTC 222
Query 119 TTTTAAGAGCCTGTGCCGATGGAGGTGCCAACCGCTTATATGATATCACCGAAGGAGAGAGAGAAAGCTTTTTG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTTTAAGAGCCTGTGCCGATGGAGGTGCCAACCGCTTATATGATATCACCGAAGGAGAGAGAGAAAGCTTTTTG 296
Query 193 CCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACT----------- 255
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACTAAGGTGTTAAT 370
Query 256 -------------------------------------------------------------------AAGGGAT 262
|||||||
Sbjct 371 TTTCTCAATATTGGGCACATCTTTCAAAGAAGAGAAGGAACCTTTCTCAGGAAGGAGGGAAGAGAAAAAGGGAT 444
Query 263 GTGAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATA 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATA 518
Query 337 GAAGAAAAAGACTTAAAGGTTGATGTGATCGTGACACTGGGAGGCCTTGCTGGGCGTTTTGACCAGATTATGGC 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGAAAAAGACTTAAAGGTTGATGTGATCGTGACACTGGGAGGCCTTGCTGGGCGTTTTGACCAGATTATGGC 592
Query 411 ATCTGTGAATACCTTGTTCCAAGCGACTCACATCACTCCTTTTCCAATTATAATAATCCAAGAGGAATCGCTGA 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCTGTGAATACCTTGTTCCAAGCGACTCACATCACTCCTTTTCCAATTATAATAATCCAAGAGGAATCGCTGA 666
Query 485 TCTACCTGCTCCAACCAGGAAAGCACAGG--TTGCATGTAGACACTGGAATGGAGGGTGATTGGTGTGGCCTTA 556
||||||||||||||||||| |.|| ||| |||..|| ||.||.|| ||||
Sbjct 667 TCTACCTGCTCCAACCAGG------CTGGCTTTG---------ACTTCAA---AGAGTTAT---------CTTA 713
Query 557 TTCCTGTT---------GGACAGCCTTGTAGTCAGGTTACAACC----ACAGGCCTCAAG--------TGGAAC 609
||| ||.||| || |||| |||| |.|.|..|||.| |||||
Sbjct 714 -----GTTCGGAAAAGAGGCCAG------AG-CAGG----AACCTGTGAAATGATTCATGGGAGAAGATGGAA- 770
Query 610 CTCACAAATGATGTGCT----TGCTTTT--------GGAA-----------CATTGGTCAGTACTTCCA----- 655
..||||||||.|.| |||.|.| |.|| |||.||..|||.|||..|
Sbjct 771 ---GTAAATGATGAGTTCATGTGCCTCTAGTCTCCAGTAATGGCATAAATCCATAGGGAAGTTCTTTAATGTCA 841
Query 656 ------ATACCTAC----GACGGGTC-----TGG---------TGTTGTGA----------CTGTGGAAACTGA 695
||.|||.| |.|..||| |.| |.||.||| |||.|||| |||
Sbjct 842 GCGTGTATGCCTGCCTGTGTCAAGTCACATATAGGCTAGCACATATTATGAATTAAGAAATCTGGGGAA--TGA 913
Query 696 CCACCCACTCCTCTGGACCA--TGGCCA---TCAAAAGC----------------------------------- 729
.||...|.||||.|..| || ||..|| |||||||.
Sbjct 914 ACAAAAATTCCTTTATA-CAGTTGTTCATTTTCAAAAGATGTCATATAGACTTGAAGATACAGGAGGAAAATAT 986
Query 730 -------------------------------------------------------------------------- 729
Sbjct 987 TGCTCTCATTTAACCATAAAAACTGTATTTGCATTTTTATAAACACAAAGACCATTCACATATGGCTAAGCACC 1060
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1061 TTTTTGGAACAAGAGAAAACATGGTTAATTGATTGTGGGCTAAGGCCTATCTGTGACTTCTCAAGTCCACAAAC 1134
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1135 GAGTTTATTCCCAGACTGAAAATTTTAAGGCCTGCTGATTCTTTAAAATAATGAGGAAGGCAATGAATATATAG 1208
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1209 CATGCTTACTACTATGTCATTTAAATCATTGGATTTTATAACAGCCCTCCTCTCCCTGGGAGAATAAAACTTAG 1282
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1283 CATGTATATGTGCTGTTTCCTTTGCATTATACGATACAAGTTGAAGAATACTCTCTTAGGGAGTTAATATCACA 1356
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1357 AATTGAAAAACACTTCCTTCTTTCCTTCGCCATTCTTAACAGAAGTCACCTAGGAGCACCAAACATGCTAACGT 1430
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1431 ATTCAGCTAGGCACTGCCAAACCATTAAGCCGGCCACAGACAGAGGAAAGAAAATCATCAATTAAGAGACAAGA 1504
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1505 ACTAACTGTAACACACTGAAAATAAGATAGCTCAAGAACACAGGAATTCCTCTTTGATAAGTGATGGAGAAGTC 1578
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1579 GCACTCTAACAACAGGTCTCATTGTCAGAAACACCGTTATCAGATGCAGAAGTACAGAGATCTGGACAAGGGAA 1652
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1653 AGCACAGGTTGCATGTAGACACTGGAATGGAGGGTGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATG 1726
Query 730 ---------- 729
Sbjct 1727 CAGGTTACAA 1736
