Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11864
- Subject:
- NM_001330520.3
- Aligned Length:
- 5739
- Identities:
- 483
- Gaps:
- 5256
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGAATTGGAAGCTAAAGCTACCAAAGACGTAGAAAGAAATCTTAGCAGGGATTTAGTGCAAGAAGAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAGTTGATGGAAGAAAAGAAAAAGAAAAAAGACGACAAGAAAAAGAAGGAAGCTGCTCAAAAGAAGGCCACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAGCCTCAGCCTGCCAACTCTAATAACGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGCCAACAATCAGCAGCCACAGCAGCAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAACAGCAGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGCCGCAGCCGCAGCAGCAGCAGCCACAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCAGCCACAGGCCTTGCCTCGGTATCCTCGTGAAGTACCTCCACGATTTCGCCACCAGGAACACAAACAGCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTAAAGAGGGGTCAGCATTTTCCTGTTATAGCAGCAAACCTTGGATCTGCTGTTAAGGTGTTAAACAGCCAGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAAGCAGTGCTTTAACAAATCAACAGCCACAAAATAACGGAGAGGTGCAGAACAGCAAAAACCAGTCAGATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAAACCACAGTACTTCAGGATCCCATTATGAAAATTCCCAGCGGGGACCTGTGTCTTCTACAAGTGATTCTAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAAACTGTAAGAATGCTGTTGTAAGTGACTTGTCGGAAAAAGAAGCATGGCCCTCAGCCCCTGGCAGTGATCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGTTGGCTTCAGAATGTATGGATGCTGATTCTGCCTCCAGTTCTGAATCAGAGAGAAACATCACTATCATGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTCAGGGAACACAGGTGGTGAAAAAGATGGCCTTCGGAATAGCACTGGACTTGGTTCCCAAAACAAGTTTGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTGGTAGCAGCAGCAATAATGTGGGCCATGGAAGTAGTACTGGGCCATGGGGTTTTTCCCATGGAGCCATAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAATCTGAAAGTAGCAACAATAGAATGAATGCTTGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCACTGTAAGTTCTTCATCAAATGGAGGGTTAAATCCAAGCACTTTGAATTCAGCTAGCAACCATGGTGCCTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAGTATTAGAGAACAATGGACTTGCCCTAAAAGGGCCTGTAGGGAGTGGTAGTTCTGGCATTAATATTCAGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGTACTATAGGCCAGATGCCTAACAATCAGAGTATTAACTCTAAAGTGAGTGGTGGTTCTACCCATGGTACCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGGAAGCCTTCAGGAAACTTGTGAATCTGAAGTAAGTGGTACACAGAAGGTTTCATTCAGTGGTCAACCTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATATTACCACTGAAATGACTGGACCAAATAACACTACTAACTTTATGACCTCTAGTTTACCAAACTCCGGTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGTGCAGAATAATGAGCTGCCTAGTAGTAACACAGGGGCCTGGCGTGTGAGCACAATGAATCATCCTCAGATGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGCTCCATCAGGTATGAATGGCACTTCCCTTTCTCACCTTAGCAATGGAGAGTCAAAAAGTGGAGGCTCTTAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGTACTACATGGGGTGCCTATGGTTCTAATTACTCTGGAGACAAATGTTCAGGCCCTAATGGCCAAGCTAATGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGACACTGTGAATGCAACTCTAATGCAGCCTGGCGTAAATGGTCCTATGGGCACTAACTTTCAAGTTAACACAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACAAAGGAGGTGGTGTGTGGGAATCTGGTGCAGCAAACTCCCAGAGTACATCATGGGGAAGTGGAAATGGCGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AATTCTGGAGGAAGTCGAAGAGGATGGGGAACCCCTGCACAAAACACTGGCACTAATTTACCCAGCGTTGAGTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAACAAACTGCCTAGCAATCAGCATTCCAATGATAGTGCAAATGGCAATGGTAAGACGTTTACAAATGGATGGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AATCTACTGAGGAAGAGGATCAGGGTTCTGCCACATCTCAGACAAATGAGCAAAGCAGTGTGTGGGCCAAAACA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGAGGTACAGTGGAGAGCGATGGTAGTACAGAAAGCACTGGACGCCTTGAGGAAAAAGGAACTGGGGAAAGTCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGTAGAGACAGAAGAAAAATTGATCAGCACACATTACTCCAAAGCATTGTAAACAGAACTGACTTAGATCCAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGTCCTGTCCAACTCTGGTTGGGGACAGACTCCTATTAAGCAGAATACTGCCTGGGATACAGAAACATCACCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGAGGGGAACGAAAGACTGACAATGGGACAGAGGCCTGGGGAAGCTCTGCAACACAGACTTTTAACTCAGGGGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATGTATAGATAAGACTAGCCCTAATGGTAATGATACCTCATCTGTATCAGGGTGGGGCGATCCCAAACCTGCTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGAGGTGGGGAGATTCCAAAGGCTCAAACTGCCAGGGGGGGTGGGAAGATGATTCTGCTGCTACAGGAATGGTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAGAGCAATCAGTGGGGGAATTGCAAAGAGGAGAAGGCTGCATGGAATGACTCGCAAAAGAATAAACAGGGATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGTGATGGACAAAAATCAAGCCAAGGGTGGTCTGTTTCTGCCAGTGATAACTGGGGAGAAACTTCAAGGAATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACCATTGGGGTGAGGCCAATAAGAAATCCAGCTCAGGAGGTAGTGACAGTGACAGGTCCGTTTCCGGTTGGAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAACTTGGTAAAACTAGTTCTTTCACTTGGGGAAACAACATAAATCCAAATAATTCATCAGGATGGGATGAATC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTCTAAACCTACTCCTTCCCAGGGATGGGGAGACCCTCCAAAGTCTAATCAGTCTCTAGGTTGGGGAGATTCGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAAAGCCAGTCAGCTCTCCAGACTGGAACAAGCAACAAGACATTGTTGGATCTTGGGGAATCCCACCAGCTACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGCAAACCTCCTGGTACAGGCTGGCTGGGGGGACCTATACCAGCCCCAGCAAAAGAAGAAGAACCCACAGGCTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGAGGAACCATCCCCAGAATCTATACGTCGCAAAATGGAGATTGATGATGGAACTTCAGCTTGGGGAGATCCAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCAAATACAACTACAAAAATGTGAACATGTGGAACAAAAACGTCCCAAATGGCAACAGCCGTTCAGACCAGCAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCACAGGTACATCAGCTGCTAACGCCTGCAAGTGCCATCTCAAACAAAGAGGCAAGCAGTGGCTCTGGCTGGGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGAGCCCTGGGGGGAGCCTTCTACTCCAGCCACAACTGTGGATAATGGTACTTCAGCATGGGGTAAGCCCATAG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACAGTGGTCCCAGCTGGGGGGAACCCATTGCTGCGGCATCCAGCACATCCACGTGGGGCTCCAGCTCTGTTGGT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCACAAGCATTAAGCAAATCTGGGCCAAAATCTATGCAAGATGGCTGGTGTGGTGATGATATGCCATTGCCTGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAATCGCCCCACTGGCTGGGAAGAGGAAGAGGATGTGGAGATTGGAATGTGGAATAGTAATTCATCTCAAGAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTAACTCATCTTTAAATTGGCCACCATATACAAAGAAAATGTCATCGAAGGGTCTGAGTGGCAAAAAAAGGAGA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGGGAAAGGGGAATGATGAAAGGTGGAAACAAACAAGAAGAAGCGTGGATAAATCCATTTGTTAAACAGTTTTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AAACATCAGTTTTTCGAGAGACTCACCAGAGGAAAATGTACAAAGCAATAAGATGGACCTTTCTGGAGGAATGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TACAAGACAAACGAATGGAGATAGATAAACATAGCCTAAATATTGGTGATTACAATCGAACGGTCGGGAAAGGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCTGGTTCTCGGCCTCAGATTTCCAAAGAGTCTTCCATGGAGCGCAATCCTTATTTTGATAAGAATGGCAATCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CAGTATGTTTGGTGTTGGAAACACAGCAGCACAACCCCGGGGCATGCAGCAGCCTCCAGCACAACCTCTTAGTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CATCTCAGCCTAATCTCCGTGCTCAAGTGCCTCCTCCATTACTCTCCCCTCAGGTTCCAGTTTCATTGCTGAAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TATGCACCAAACAACGGTGGCCTGAATCCACTCTTTGGCCCTCAACAGGTAGCCATGCTGAACCAGCTATCCCA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GCTAAACCAGCTTTCTCAGATCTCCCAGTTACAGCGATTGTTAGCGCAGCAGCAAAGGGCGCAGAGTCAGAGAA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GCGTGCCTTCTGGGAACCGGCCGCAGCAAGACCAGCAGGGTCGACCTCTTAGTGTGCAGCAGCAAATGATGCAA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CAATCTCGTCAACTTGATCCAAACCTGTTGGTGAAGCAGCAGACTCCACCATCTCAGCAGCAGCCACTCCATCA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GCCAGCCATGAAGTCTTTCCTTGACAATGTCATGCCCCACACTACACCTGAGCTGCAAAAAGGGCCATCACCAA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TAAATGCTTTCAGCAACTTCCCTATAGGCTTGAACTCAAACTTGAATGTAAATATGGATATGAACAGTATTAAA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GAGCCACAGTCAAGACTAAGGAAGTGGACGACAGTGGACAGCATTTCTGTGAACACATCTTTGGATCAAAACTC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CAGCAAACATGGTGCTATTTCAAGTGGTTTCAGGCTGGAAGAGTCTCCATTTGTTCCCTATGACTTTATGAACA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GCAGTACTTCACCAGCCAGTCCTCCAGGTTCAATAGGAGATGGCTGGCCACGTGCCAAATCGCCTAACGGCTCT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 AGCAGTGTTAATTGGCCACCAGAATTTCGTCCTGGTGAGCCATGGAAAGGTTATCCAAACATTGACCCTGAAAC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TGACCCTTACGTCACTCCTGGCAGTGTCATAAACAATCTTTCAATTAATACTGTGCGGGAAGTTGACCACCTCA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 GGGACAGGAACAGTGGGTCATCCTCATCCTTGAACACCACGCTGCCTTCAACTAGTGCCTGGTCATCCATTCGT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 GCCTCCAACTACAACGTTCCCCTCAGCAGTACAGCACAAAGCACTTCAGCCAGAAATAGTGATTCCAAATTGAC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 ATGGTCTCCTGGTTCAGTTACAAACACCTCTCTGGCTCATGAGCTGTGGAAGGTCCCTTTGCCACCTAAAAACA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TCACTGCTCCGTCCCGCCCACCTCCGGGACTGACTGGTCAGAAGCCACCCTTGTCTACGTGGGATAATTCTCCC 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 CTTCGTATAGGTGGAGGATGGGGAAATTCTGACGCCAGATATACCCCAGGTTCCAGCTGGGGTGAGAGCAGCTC 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 AGGGAGAATAACAAATTGGCTTGTTCTAAAAAACCTTACACCTCAGATCGATGGCTCAACTCTGCGCACTCTGT 5254
Query 1 --ATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCCTCACGGAAATGCTCTGGTCCGCTACAGTTCA 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5255 GCATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCCTCACGGAAATGCTCTGGTCCGCTACAGTTCA 5328
Query 73 AAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACTGGGGAACACTACTATTCTTGCTGAGTT 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5329 AAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACTGGGGAACACTACTATTCTTGCTGAGTT 5402
Query 147 TGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAGTCTCTGACCCCTTCTCCCGGCTGGCAGTCTC 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5403 TGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAGTCTCTGACCCCTTCTCCCGGCTGGCAGTCTC 5476
Query 221 TCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACTCATTCTCCAGCCGGACCGATCTCAATCAC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5477 TCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACTCATTCTCCAGCCGGACCGATCTCAATCAC 5550
Query 295 TGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTCACGGCACTTCACTCTGGGGGACCCCGCATTA 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5551 TGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTCACGGCACTTCACTCTGGGGGACCCCGCATTA 5624
Query 369 TTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAGGAATTAGCAGCCCATCTCCCATTAACGCTT 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5625 TTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAGGAATTAGCAGCCCATCTCCCATTAACGCTT 5698
Query 443 TTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 483
|||||||||||||||||||||||||||||||||||||||||
Sbjct 5699 TTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 5739
