Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11865
Subject:
NM_001330506.1
Aligned Length:
1724
Identities:
771
Gaps:
835

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACCCTCAGGGCATCGTGAAGGCCTTTCCCAAGCGGAAGAAAAGTCATGCAGATCTATCTTCAAAAGCACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAAAGATTCCCAAAAGGGAGGTGGGAGAAGCTAGAGGATGGCTGAGCTCCCTGAGAGCCCACATTATGCCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGGCATTGGACGTGCCCGGGCTGAACTCTTTGAGAAGCAGATTATCCACCATGGCGGCCAGGTGTGCTCTGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGGCCCCAGGAGTCACTCACATTGTGGTGGATGAAGACATGGACTATGAGCGGGCTCTCCGGCTCCTCAGGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCCCCAGCTACCCCCTGGTGCCCAGCTGGTGAAGTCCACCTGGCTGAGCTTGTGCCTGCAGGAGGGAAGGCTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGACACGGAAGGATTCAGCCTTCCCATGCCCAAGAGGTCCTTGGATGAACCACAGCCCAGCAAGTCAGGCCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GATGCTTCTGCTCCTGGCACCCAGCGGGATTTACCCAGGACCACCCTTTCTCTTTCCCCTCCTCACACCAGAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGTATCTCCTCCCCCAACGGCAGAAAAGCCATCAAGAACCCAAGCCCAGCTCAGCTCAGAGGATGAAACCAGCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATGGAGAAGGGCCCCAGGTTAGCTCAGCAGATCTGCAAGCCTTGATCACTGGGCACTACCCCACTCCCCCTGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAGATGGTGGGCCTGACCCAGCACCAGAAGCTCTGGATAAATGGGTCTGTGCACAGCCCTCGAGCCAGAAGGC  740

Query    1  -------------ATGCATCATCA-----------AAAGTACTTGC-AAAGATTCCTA----------GGAGGG  39
                         .|||| |||||           .||||.||.|| ||||   ||||          ||||..
Sbjct  741  AACTAACTACAATCTGCA-CATCACAGAGAAGCTGGAAGTGCTGGCTAAAG---CCTACAGTGTCCAGGGAGAC  810

Query   40  AA---GAGGG---------------------------------AGA------AGAAGC------------AGAA  59
            ||   |||||                                 |||      |.||||            |..|
Sbjct  811  AAGTGGAGGGCCCTGGGCTATGCAAAGGCCATCAATGCTCTCAAGAGCTTCCACAAGCCTGTCAGCTCCTACCA  884

Query   60  GGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATAGAGATCCTGGAGAGCGGGCATT  133
            |||||||||.||.|||||.||.|||||.|||||||||||.|||||..||||.||||||||||||||.||||||.
Sbjct  885  GGAGGCCTGTAGCATCCCGGGAATTGGCAAGCGGATGGCGGAGAAGGTCATGGAGATCCTGGAGAGTGGGCATC  958

Query  134  TGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTCCAACATCTGGGGAGCTGGGACC  207
            ||||||||||.|||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  959  TGCGGAAGCTAGACCACATCAGTGACAGTGTGCCTGTCTTGGAGCTCTTCTCCAACATCTGGGGAGCTGGGACG  1032

Query  208  AAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCCGCAGCCAGGCCTCCCTGACAAC  281
            |||||||||||||||||||||||.|||||||||||||..||.|||||..|||..||||.||.|||||||||..|
Sbjct 1033  AAGACTGCCCAGATGTGGTACCATCAGGGCTTCCGAAACCTAGAAGATCTCCAAAGCCTGGGCTCCCTGACCGC  1106

Query  282  CCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCCAGGGAGGAGGCTACAGAGATTG  355
            .|||||||||||.|||.|||||||.|||..||||||||||||.||.||||||||||||||||||.|.||.||||
Sbjct 1107  TCAGCAGGCCATTGGCTTGAAGCACTACGATGACTTCCTGGACCGCATGCCCAGGGAGGAGGCTGCGGAAATTG  1180

Query  356  AGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGTGGCATGTGGTTCATACCGACGG  429
            |||||||.||||.||.|.|||||||||||||.|||.|||||||||||||||||||.|||||.||.|||||||||
Sbjct 1181  AGCAGACGGTCCGGATATCAGCCCAGGCCTTCAACCCTGGGCTGCTGTGTGTGGCTTGTGGCTCTTACCGACGG  1254

Query  430  GGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCCGGTCCCACCGGGGTATCTTCAG  503
            ||.|||..|||.||.||.|||||.||.||.|||||.||||||||.||||||||.|||||||||||.||||||||
Sbjct 1255  GGGAAGATGACGTGCGGGGATGTGGATGTACTCATTACTCACCCCGATGGCCGATCCCACCGGGGCATCTTCAG  1328

Query  504  CCGCCTCCTTGACAGTCTTCGGCAGGAAGGGTTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATGGTCAGC  577
            |.||||||||||.||.|||||||||.|||||||||||||||||||||||||||||||.||||||||.||.||.|
Sbjct 1329  CTGCCTCCTTGATAGCCTTCGGCAGCAAGGGTTCCTCACAGATGACTTGGTGAGCCAGGAGGAGAACGGCCAAC  1402

Query  578  AACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATCGTGGTG  651
            |.|||||.|||.||||.||||||||||||||||||||.|||..|||.||||||||.|||||||||||||||||.
Sbjct 1403  AGCAGAAATACCTGGGTGTGTGCCGGCTCCCAGGGCCCGGGAAGCGCCACCGGCGACTGGACATCATCGTGGTA  1476

Query  652  CCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCGAGCCCT  725
            |||||..|.||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||.||||.||
Sbjct 1477  CCCTACTGTGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCCCACTTCAACCGGTCCATGAGAGCTCT  1550

Query  726  GGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATGGCTG-C  798
            ||||||.||||||||||||||.|||||.||.|||||.|||||..|.|||||.||||||||||.|||.|| || |
Sbjct 1551  GGCCAAGACCAAGGGCATGAGCCTGTCGGAGCATGCGCTCAGTGCAGCTGTAGTCCGGAACAGCCAAGG-TGTC  1623

Query  799  AAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCCTACCG  872
            ||||||||||||||.|.||||||||||||.|||||.||||||||.|||||||.||.|||||||||.||||||||
Sbjct 1624  AAGGTGGGGCCTGGACAAGTGCTGCCCACCCCCACGGAGAAGGACGTCTTCAAGCACTTAGGCCTGCCCTACCG  1697

Query  873  AGAACCTGCTGAGCGGGACTGG  894
            .||.||.|||||.|||||||||
Sbjct 1698  GGAGCCAGCTGAACGGGACTGG  1719

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