Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11865
• Subject: XM_011539654.1
• Aligned Length: 1470
• Identities: 886
• Gaps: 576

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATCCCAGGGGTATCTTGAAGGCATTTCCCAAGCGGCAGAAAATTCATGCTGATGCATCATCAAAAGTACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAAAGATTCCTAGGAGGGAAGAGGGAGAAGAAGCAGAAGAGTGGCTGAGCTCCCTTCGGGCCCATGTTGTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACTGGCATTGGACGAGCCCGGGCAGAACTCTTTGAGAAGCAGATTGTTCAGCATGGCGGCCAGCTATGCCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCCAGGGCCCAGGTGTCACTCACATTGTGGTGGATGAAGGCATGGACTATGAGCGAGCCCTCCGCCTTCTCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTACCCCAGCTGCCCCCGGGTGCTCAGCTGGTGAAGTCAGCCTGGCTGAGCTTGTGCCTTCAGGAGAGGAGGC  370

Query    1  ----------------AT---GCATCATCA-------AAAGTACTTG-------CAAAG---------------  26
                            ||   |||||.|||       .|.|||||||       ||.||               
Sbjct  371  TGGTGGATGTAGCTGGATTCAGCATCTTCATCCCCAGTAGGTACTTGGACCATCCACAGCCCAGCAAGGCAGAG  444

Query   27  ------------ATTCCT----------AGGAGG----------------------------------------  38
                        ||||||          |.||||                                        
Sbjct  445  CAGGATGCTTCTATTCCTCCTGGCACCCATGAGGCCCTGCTTCAGACAGCCCTTTCTCCTCCTCCTCCTCCCAC  518

Query   39  ----------------------------GAAGAGGGA------------------------------GAAGAAG  54
                                        .||||||.|                              ||.||||
Sbjct  519  CAGGCCTGTGTCTCCTCCCCAAAAGGCAAAAGAGGCACCAAACACCCAAGCCCAGCCCATCTCTGATGATGAAG  592

Query   55  C------------AGA-----AGGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATA  111
            |            |||     |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAGTGATGGGGAAGAAACCCAGGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATA  666

Query  112  GAGATCCTGGAGAGCGGGCATTTGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTC  185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGATCCTGGAGAGCGGGCATTTGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTC  740

Query  186  CAACATCTGGGGAGCTGGGACCAAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCC  259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAACATCTGGGGAGCTGGGACCAAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCC  814

Query  260  GCAGCCAGGCCTCCCTGACAACCCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCC  333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCAGCCAGGCCTCCCTGACAACCCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCC  888

Query  334  AGGGAGGAGGCTACAGAGATTGAGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGT  407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGGAGGAGGCTACAGAGATTGAGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGT  962

Query  408  GGCATGTGGTTCATACCGACGGGGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCC  481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCATGTGGTTCATACCGACGGGGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCC  1036

Query  482  GGTCCCACCGGGGTATCTTCAGCCGCCTCCTTGACAGTCTTCGGCAGGA---------------------AGGG  534
            |||||||||||||||||||||||||||||||||||||||||||||||||                     ||||
Sbjct 1037  GGTCCCACCGGGGTATCTTCAGCCGCCTCCTTGACAGTCTTCGGCAGGAAGCAGTCCCCTCTGTTGGGCCAGGG  1110

Query  535  TTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATGGTCAGCAACAGAAGTACTTGGGGGTGTGCCGGCTCCC  608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATGGTCAGCAACAGAAGTACTTGGGGGTGTGCCGGCTCCC  1184

Query  609  AGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATCGTGGTGCCCTATAGCGAGTTTGCCTGTGCCCTGCTCT  682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATCGTGGTGCCCTATAGCGAGTTTGCCTGTGCCCTGCTCT  1258

Query  683  ACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCGAGCCCTGGCCAAAACCAAGGGCATGAGTCTGTCAGAA  756
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCGAGCCCTGGCCAAAACCAAGGGCATGAGTCTGTCAGAA  1332

Query  757  CATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATGGCTGCAAGGTGGGGCCTGGCCGAGTGCTGCCCACTCC  830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATGGCTGCAAGGTGGGGCCTGGCCGAGTGCTGCCCACTCC  1406

Query  831  CACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCCTACCGAGAACCTGCTGAGCGGGACTGG  894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCCTACCGAGAACCTGCTGAGCGGGACTGG  1470