Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11900
- Subject:
- XM_017016152.1
- Aligned Length:
- 2910
- Identities:
- 1543
- Gaps:
- 1362
Alignment
Query 1 ------------------------------------ATGTCAGCTGAAACACCAATCACATTGAATATCGATCC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAATCAACGCAAAGGAGAGAGAAACAAGGCAGCATGTCAGCTGAAACACCAATCACATTGAATATCGATCC 74
Query 39 TCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAAGCTACTGGAGCCTCTCATAATCCAGGTTACCACACTTG 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAAGCTACTGGAGCCTCTCATAATCCAGGTTACCACACTTG 148
Query 113 TAAACTGTCCCCAGAACCCTTCCAGCAGGAAAAAAGGACGTTCGAAAAGAGCCAGTGTCCTTCTAGCTTCTGTG 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAAACTGTCCCCAGAACCCTTCCAGCAGGAAAAAAGGACGTTCGAAAAGAGCCAGTGTCCTTCTAGCTTCTGTG 222
Query 187 GAGGAAGCAACTTGGAATTTATTAGACAAGGGAGAGAAGATTGCCCAGGAAGCTACAGTTTTAAAGGATGAGCT 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGGAAGCAACTTGGAATTTATTAGACAAGGGAGAGAAGATTGCCCAGGAAGCTACAGTTTTAAAGGATGAGCT 296
Query 261 TACGGCTTCACTTGAGGAAGTTCGCAAAGAAAGTGAAGCTCTGAAAGTATCAGCTGAGAGATTTACAGATGACC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TACGGCTTCACTTGAGGAAGTTCGCAAAGAAAGTGAAGCTCTGAAAGTATCAGCTGAGAGATTTACAGATGACC 370
Query 335 CCTGTTTTCTCCCAAAAAGGGAGGCTGTGGTTCAAGCTGCCCGTGCCTTGCTGGCTGCGGTGACGAGACTCCTT 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTGTTTTCTCCCAAAAAGGGAGGCTGTGGTTCAAGCTGCCCGTGCCTTGCTGGCTGCGGTGACGAGACTCCTT 444
Query 409 ATCCTTGCGGACATGATTGATGTCATGTGCCTCTTGCAACATGTGTCAGCTTTTCAAAGGACATTTGAGTCTCT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCCTTGCGGACATGATTGATGTCATGTGCCTCTTGCAACATGTGTCAGCTTTTCAAAGGACATTTGAGTCTCT 518
Query 483 CAAAAATGTTGCCAACAAATCTGACCTCCAGAAAACCTACCAGAAGCTTGGGAAGGAGCTGGAAAATTTGGATT 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAAAATGTTGCCAACAAATCTGACCTCCAGAAAACCTACCAGAAGCTTGGGAAGGAGCTGGAAAATTTGGATT 592
Query 557 ATTTAGCCTTCAAACGTCAGCAG--------------------------------------------------- 579
|||||||||||||||||||||||
Sbjct 593 ATTTAGCCTTCAAACGTCAGCAGGTAAACAACTCAGGACTCAACACCACCTTTGCATTCTCCAGAAAAAATTTA 666
Query 580 ------------------GACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTGAA 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCACGCCTAAAGCATCAGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTGAA 740
Query 636 GGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAA 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAA 814
Query 710 GCAAGGACACAGTTTGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAAT 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCAAGGACACAGTTTGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAAT 888
Query 784 ATGACAACCCCACCAGAACCTCAGGCAGCAACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCT 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATGACAACCCCACCAGAACCTCAGGCAGCAACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCT 962
Query 858 GAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAGAAACGCCTTGAAGCCATTATCAGTGGGG 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAGAAACGCCTTGAAGCCATTATCAGTGGGG 1036
Query 932 CTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAATGCAACGCCATT 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAATGCAACGCCATT 1110
Query 1006 CGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAAC-------------------------------- 1047
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACATGAGGAAACTGATACCATGCCGTGCTACCAG 1184
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1185 GCTAACCAAAACTGCACCCCAGGTTTATTTAACTTCAGGTCTAGTGGATTCGAAGTCTACGATCTCCCTCCTAC 1258
Query 1048 --------------GCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAG 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACCATGAAATCAAAGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAG 1332
Query 1108 ACAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGT 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGT 1406
Query 1182 CCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTC 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTC 1480
Query 1256 ATGAACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAA 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATGAACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAA 1554
Query 1330 ATTGTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGC 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATTGTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGC 1628
Query 1404 AAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCC 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCC 1702
Query 1478 TCACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTG------GTATGTT------- 1538
|||||||||||||||||||||||||||||||||||||||||||||||||||||| .|||.||
Sbjct 1703 TCACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAAAGCCATATCTTGGAAGAT 1776
Query 1539 ---------TTTAT----TCTTT--------------------------------------------------- 1548
|.||| .|.||
Sbjct 1777 GTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGAGG 1850
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1851 CCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTG 1924
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1925 TAATGAGAAATGTTAACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTGGAA 1998
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1999 GCCTTAAGCAAAAGCTCATTGAATGTGTTGGATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGATAC 2072
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2073 AATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAGGAACTGGAGGATGTTTCTGACCTTGAAG 2146
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2147 AGGAACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAGATGACTCAACTG 2220
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2221 CCTGAGGCAGAAAAAGAAAAGATTGCTGAGCAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGA 2294
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2295 GATTGAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCCAAGAACATGTGTATGATCATGATGGAGA 2368
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2369 TGACAGACTTCACTAGGGGCAAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCA 2442
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2443 GAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGA 2516
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2517 CTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGA 2590
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2591 TCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAAT 2664
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2665 TTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCC 2738
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2739 TGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGA 2812
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2813 AGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGT 2886
Query 1549 ------------------------ 1548
Sbjct 2887 GAATTTAGAGGAAGACAAATCTAC 2910
