Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11900
- Subject:
- XM_017016155.2
- Aligned Length:
- 2685
- Identities:
- 760
- Gaps:
- 1920
Alignment
Query 1 ATGTCAGCTGAAACACCAATCACATTGAATATCGATCCTCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTACTGGAGCCTCTCATAATCCAGGTTACCACACTTGTAAACTGTCCCCAGAACCCTTCCAGCAGGAAAAAAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GACGTTCGAAAAGAGCCAGTGTCCTTCTAGCTTCTGTGGAGGAAGCAACTTGGAATTTATTAGACAAGGGAGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGATTGCCCAGGAAGCTACAGTTTTAAAGGATGAGCTTACGGCTTCACTTGAGGAAGTTCGCAAAGAAAGTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCTCTGAAAGTATCAGCTGAGAGATTTACAGATGACCCCTGTTTTCTCCCAAAAAGGGAGGCTGTGGTTCAAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTGCCCGTGCCTTGCTGGCTGCGGTGACGAGACTCCTTATCCTTGCGGACATGATTGATGTCATGTGCCTCTTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAACATGTGTCAGCTTTTCAAAGGACATTTGAGTCTCTCAAAAATGTTGCCAACAAATCTGACCTCCAGAAAAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTACCAGAAGCTTGGGAAGGAGCTGGAAAATTTGGATTATTTAGCCTTCAAACGTCAGCAGGACTTAAAATCTC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTGAAGGAGAACTCTCCCCTCTTGCATTCAATTTGT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTTTGTGAAGAAATTCAGAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCAA 814
|||||||||||||||||||||||||||||||
Sbjct 1 -------------------------------------------ATGACAACCCCACCAGAACCTCAGGCAGCAA 31
Query 815 CCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32 CCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATA 105
Query 889 CGACCATCACTAGAGAAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 CGACCATCACTAGAGAAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAG 179
Query 963 GGACTTACACCGAGAGCGGATTATCGCAGAATGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GGACTTACACCGAGAGCGGATTATCGCAGAATGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGT 253
Query 1037 ACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAGACA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 ACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAGACA 327
Query 1111 AGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGTCCC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 AGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGTCCC 401
Query 1185 TCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 402 TCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATG 475
Query 1259 AACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAATT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 AACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAATT 549
Query 1333 GTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCAAG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 GTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCAAG 623
Query 1407 ACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCCTCA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 ACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCCTCA 697
Query 1481 CTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTG------GTATGTT---------- 1538
||||||||||||||||||||||||||||||||||||||||||||||||||| .|||.||
Sbjct 698 CTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAAAGCCATATCTTGGAAGATGTC 771
Query 1539 ------TTTAT----TCTTT------------------------------------------------------ 1548
|.||| .|.||
Sbjct 772 AACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGAGGCCG 845
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 846 GGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAA 919
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 920 TGAGAAATGTTAACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTGGAAGCC 993
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 994 TTAAGCAAAAGCTCATTGAATGTGTTGGATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGATACAAT 1067
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1068 TCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAGGAACTGGAGGATGTTTCTGACCTTGAAGAGG 1141
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1142 AACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAGATGACTCAACTGCCT 1215
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1216 GAGGCAGAAAAAGAAAAGATTGCTGAGCAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGAT 1289
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1290 TGAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCCAAGAACATGTGTATGATCATGATGGAGATGA 1363
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1364 CAGACTTCACTAGGGGCAAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAA 1437
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1438 TCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTT 1511
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1512 GTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGATCC 1585
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1586 AGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTA 1659
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1660 ATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGC 1733
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1734 TGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGC 1807
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1808 CAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAA 1881
Query 1549 --------------------- 1548
Sbjct 1882 TTTAGAGGAAGACAAATCTAC 1902
