Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11921
- Subject:
- NR_026692.2
- Aligned Length:
- 4384
- Identities:
- 1140
- Gaps:
- 3244
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACACTGGGGGAGAGTGGGGTGACATGAGTGACTCCAAGGAACCAAGACTGCAGCAGCTGGGCCTCCTGGGTGAG 74
Query 1 -------------------------------------------------ATGGCCTCAGCCTGCCCAGGCTCTG 25
|||||||||||||||||||||||||
Sbjct 75 GCTGGGTTGGGACGCTGGGATTCTGGGAAGGGGGAAGGGATGGCCAGCCATGGCCTCAGCCTGCCCAGGCTCTG 148
Query 26 ATTTCACGTCTATCCATTCAGAGGAGGAACAGCTGAGAGGCCTTGGATTCCGACAGACTCGAGGATACAAGAGC 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTCACGTCTATCCATTCAGAGGAGGAACAGCTGAGAGGCCTTGGATTCCGACAGACTCGAGGATACAAGAGC 222
Query 100 TTAGC--------------------------------------------------------------------- 104
|||||
Sbjct 223 TTAGCAGGGTGTCTTGGCCATGGTCCCCTGGTGCTGCAACTCCTCTCCTTCACGCTCTTGGCTGGGCTCCTTGT 296
Query 105 ---AGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGAACAATCCAGGCAAGACGCGATCTACCAGAACCTGACCC 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAAGTGTCCAAGGTCCCCAGCTCCATAAGTCAGGAACAATCCAGGCAAGACGCGATCTACCAGAACCTGACCC 370
Query 176 AGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTG 444
Query 250 AAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGC 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGC 518
Query 324 TGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAG 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAG 592
Query 398 TGGGTGAGCTTCCAGAGAAATCTAAGATGCAGGAGATCTACCAGGAGCTGACTCGGCTGAAGGCTGCAGTGGGT 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGGTGAGCTTCCAGAGAAATCTAAGATGCAGGAGATCTACCAGGAGCTGACTCGGCTGAAGGCTGCAGTGGGT 666
Query 472 GAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCT 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCT 740
Query 546 TCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAG 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCAGAGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAG 814
Query 620 AGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGAACGCCTGTGCCACCCC 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAAATCTAAGCAGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGAACGCCTGTGCCACCCC 888
Query 694 TGTCCCTGGGAATGGACATTCTTCCAAGGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTC 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGTCCCTGGGAATGGACATTCTTCCAAGGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTC 962
Query 768 CATCACCGCCTGCAAAGAAGTGGGGGCCCAGCTCGTCGTAATCAAAAGTGCTGAGGAGCAGAACTTCCTACAGC 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATCACCGCCTGCAAAGAAGTGGGGGCCCAGCTCGTCGTAATCAAAAGTGCTGAGGAGCAGAACTTCCTACAGC 1036
Query 842 TGCAGTCTTCCAGAAGTAACCGCTTCACCTGGATGGGACTTTCAGATCTAAATCAGGAAGGCACGTGGCAATGG 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCAGTCTTCCAGAAGTAACCGCTTCACCTGGATGGGACTTTCAGATCTAAATCAGGAAGGCACGTGGCAATGG 1110
Query 916 GTGGACGGCTCACCTCTGTTGCCCAGCTTCAAGCAGTATTGGAACAGAGGAGAGCCCAACAACGTTGGGGAGGA 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTGGACGGCTCACCTCTGTTGCCCAGCTTCAAGCAGTATTGGAACAGAGGAGAGCCCAACAACGTTGGGGAGGA 1184
Query 990 AGACTGCGCGGAATTTAGTGGCAATGGCTGGAACGACGACAAATGTAATCTTGCCAAATTCTGGATCTGCAAAA 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGACTGCGCGGAATTTAGTGGCAATGGCTGGAACGACGACAAATGTAATCTTGCCAAATTCTGGATCTGCAAAA 1258
Query 1064 AGTCCGCAGCCTCCTGCTCCAGGGATGAAGAACAGTTTCTTTCTCCAGCCCCTGCCACCCCAAACCCCCCTCCT 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGTCCGCAGCCTCCTGCTCCAGGGATGAAGAACAGTTTCTTTCTCCAGCCCCTGCCACCCCAAACCCCCCTCCT 1332
Query 1138 GCG----------------------------------------------------------------------- 1140
|||
Sbjct 1333 GCGTAGCAGAACTTCACCCCCTTTTAAGCTACAGTTCCTTCTCTCCATCCTTCGACCTTCACAAAATCTCTGGG 1406
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1407 ACTGTTCTTTGTCAGATTCTTCCTCCTTTAGAAGGCTGGGTCCCATTCTGTCCTTCTTGTCATGCCTCCAATTT 1480
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1481 CCCCTGGTGTAGAGCTTGTTTTTCTGGCCCATCCTTGGAGCTTTATGAGTGAGCTGGTGTGGGATGCCTTTGGG 1554
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1555 GGTGGACTTGTGTTCCAAGAATCCACTCTCTCTTCCTTTTGGAGATTAGGATATTTGGGTTGCCATGTGTAGCT 1628
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1629 GCTATGTCCCCTGGGGCGTTATCTTATACATGCAAACCTACCATCTGTTCAACTTCCACCTACCACCTCCTGCA 1702
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1703 CCCCTTTGATCGGGGACTTACTGGTTGCAAGAGCTCATTTTGCAGGCTGGAAGCACCAGGGAATTAATTCCCCC 1776
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1777 AGTCAACCAATGGCACCCAGAGAGGGCATGGAGGCTCCACGCAACCCCTTCCACCCCCACATCTTCCTTTGTCT 1850
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1851 TATACATGGCTTCCATTTGGCTGTTTCTAAGTTGTATTCTTTATTTTATTATTATTATTACTATTTTTCGAGAT 1924
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1925 GGAGTTTCACTCTTGTCGCTCAGGCTGGAGTGCCATGGCGCGATCTTGGCTCACTGCAACCTCTGCCTCCCGGG 1998
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1999 TTCAAGTGATTCTCCTGCCTCAGCCTCACGAGTAGCTGGAATTACAGGCAGGCGCCACCAGACCCGGCTAATTT 2072
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2073 TTTGTATTTTTAGTACAGATGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTTGAACTCCCGACCTCAGATGATCT 2146
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2147 GCCCGCCTCGGCCTCCCAAAATTGCTGGGATTACAGGTGTGAGCCACCGCGCCTGGCCTATTATTTTTTGTAAG 2220
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2221 AATAAAACAGGTTTATTGGGATTTGGGACTCTGAACAGTTCTGTCTCTACTACCTGATCTCCTCCTACCACGAC 2294
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2295 TTTGGGATCTAGAGGAGCTTTGGCTCCGGCTGTGACGGCTCCGGCCGTTCTCACTGCGGCTGCACCGGCCCCCG 2368
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2369 CTGCGGTCACTATTTCTTCCTCTGCTAGGTGAATTGTGCCTCTCCTGGCTCTTTGACATGTGCTAGTGAGATTT 2442
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2443 CTTCCTTTTCCTTTCGGATTCCCCATTTCTTTTGTAGGAATGGTCTGGACTAGGGTTCTCCTTCCCCGCAGCCT 2516
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2517 GTAGTATTCATCGTGGTGGCCCACCCTCTCTCTCCCCTTGGAGCTCTTGCCAAAGGAGGAGACAAGCAGAGGTC 2590
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2591 TCTATTGGATTTCTCAACACCTGAAGAAAGTTGCAGTGTTTTCCTCTTGGACATTGTTGTATTTCAAATAAACC 2664
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2665 ACAAATCATCATTTTCCACCGAGCCACTGGGCAGAATTCACACTGAAGCTGTCGTCCTGCGTACATACCATCGT 2738
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2739 CCGTTAAACAGAGAAAGAGCTGCTTGGCATTCTTCTTCCGACTGGTACTGAACATATATACTTGCCCCTCAGGT 2812
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2813 GAGGTTCCAAGTTGCAACTGACCTTGAACTGAATCACTCTCCCCACGTTATTTTTTAATTACTATTTTTTTTTA 2886
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2887 AAGATGGGGTCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTAGGCTCACTGCAACTTCCGCCTCCC 2960
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2961 GGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTCCACTAAAAGTACAAAAATTAGCTGGGC 3034
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3035 GTGCACCACTGCGCCCAGCTAATTCTTGTATTTTTGGTAGAGACGGGGTTTCAACATGTTGACCAGGATGGTCT 3108
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3109 CGATCTCTTGACCTCGTGATTCGCCCGCCGCGTCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGCC 3182
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3183 CAGTCTCTCCCCACGTTCTTGAACTCGGGCAGCACATCCTCACAGAAATCTAGGAACTGTTGGTAGGTTTCTTC 3256
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3257 CTCGCTGTACTCCAGGCTTGCTTCGGAGTCATAGTCATCCCTCCTGCACTGCTCCTTTCCAAACACTGTAAACA 3330
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3331 TGCTTTTAATAAGAAGGGTAGGACTGGATGTTGGGAAATCATGTGAACATCTATCTCCAAATCTGCAAGCTCCT 3404
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3405 GTTTTACTGTAGAAGGGACAATTAACTCCATCCTTCTCCATGACTCTGAAATCCAAGGGGGGGTTCCGGGTTTT 3478
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3479 GCCATGTGGCGCCATTTTCCAACTCATTTTCAGCCTGATCCAGCATCTTCTGGACAGCTTCCGGTTTTTGTTTC 3552
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3553 TTCTGTCGTTTCTGTTCCTCCTCCTCTCTCTCTTTCCTCTGCTGTTCTTCCCATTGTTCCTTTAACTTTCGCTC 3626
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3627 TTGTTCTTGCCGTTTTCTAGCCACCTCTTCCTTTTCCTTCTTTATTCTGAATTCTTCTTGTGCCTTCTGCTCTC 3700
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3701 TCAGCAACCACTCCTCATGTAATCTTTGCCTCTCTCTTCCCCATAGCTTTTCTAGTTGTTGTTTTTCAATAAAA 3774
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3775 GTGTCCTCCTCTTTCTGTGAGAGTCCTGAGTCCCTCAGTGGAGCAAGTTCCTGCTGGCGTTTCTTTCGTTTCTC 3848
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3849 CTTCTTCAGGGCGGCCCTGTACTTTTTGTGGCTTGGTTTCTCTGGAAATGTCACCTTTTCGGGCGCAGCCATCT 3922
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3923 TGCCGGCACCGCCCCGCCCCTCTAGTTGTATCCTTTATAATAAACTGGTAAACATTGTAACCGCAGATTCAGCC 3996
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3997 CAATCTGGTTCAACTTTGTGTAATAAAATGGCGAGTTGTTTTTCAGTTGTCGTGGACCCCCAGGTTGCAAGTTA 4070
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 4071 CATACCCTGGGCATGTCCAGATGAACGAAGCGTGCAAATCCACGTGGAACCTAAGTGCTCAGACCGAGGAACAG 4144
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 4145 GGACTGAGTTAAGAAGTGGACACCACGTGGCATGATCCTTGATCCAATCAGATTGAGCCCTGGCGTGATCCAGT 4218
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 4219 CAGATCAAGCCTCCTGAATCCCCTCATTACAAGATCCAATCATATCATGCCTCACTACCCTCTGTATATAAAAT 4292
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 4293 CTGCCCCAGCCTCCAACTTGGAGAGACAGATTTGGGCCAGACTCCTGTGTCCTTGCTTGGCTGCCTTGCAATAA 4366
Query 1141 ------------------ 1140
Sbjct 4367 ATTTTTCTCTCTACAAAA 4384
