Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11930
Subject:
NM_001285479.1
Aligned Length:
1683
Identities:
340
Gaps:
1308

Alignment

Query    1  ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT  74
            |||||.|||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.||||||||
Sbjct    1  ATGGCAACTGATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGAT  74

Query   75  CCACGCGGACAAGTTAGGTGAGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG  148
            ||||||||||||||||||||||||.|.||||||||.|||||||||.||.||||||.|.||||||||||||||||
Sbjct   75  CCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGG  148

Query  149  AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT  222
            |||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||...||||||||||||||||
Sbjct  149  AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCT  222

Query  223  GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA  296
            .||||.||||||||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct  223  ATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA  296

Query  297  ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGA-GAGAGCTGATAGT  363
            .|||||||.||.|||||||||||      |.||.||||||.||||||||.|||||||||| ||||      ||.
Sbjct  297  GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGA------AGG  364

Query  364  ATTCATTCCACTCTTTTCATAATTGGTCAGAACAGT--------------------------------------  399
            | |||.||           |||      ||||.||.                                      
Sbjct  365  A-TCAGTC-----------TAA------AGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACT  420

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  421  CTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGC  494

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  495  AATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCA  568

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  569  TTCATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAAC  642

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  643  AGAGGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATCAAAACCACC  716

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  717  TCAGAAATCCAAAAACAGAAAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGT  790

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  791  TGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTAC  864

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  865  CCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCT  938

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  939  CGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTG  1012

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1013  GAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCT  1086

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1087  CTGAAGAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCT  1160

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1161  GCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCT  1234

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1235  TCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGAT  1308

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1309  GACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAAC  1382

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1383  ACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTG  1456

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1457  CCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGA  1530

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1531  CCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGC  1604

Query  400  -------------------------------------------------------  399
                                                                   
Sbjct 1605  GAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG  1659

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