Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11930
Subject:
XR_001737206.2
Aligned Length:
4593
Identities:
386
Gaps:
4198

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGCATGTGAGGATTAGGGAGCCCGGAAAGCCCGTTTCAACTTTTCAGTTCTGAGTCCCGAGTCACTACTCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGTACCGTCTGGAGACTTAATGGGAGCGAGTGCGAGGCAGTGAATTCTCCGCTCTCTAGTTTTCCAATTCTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGTCTTCAAAAAAAGGTTTGCTCTTGAGCTGCGCCTAAACTGAGAAGCGGGAAAGGCTAGCCCCGCTAAAGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGACGAGTGGCAGAAGCGGAAACCCAGTTAAGAGAAGGGACTGCCCTGGAGAGCACAGAAAGCGAAGGTTAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGGAAAGCGGCGCCCCTCCGAGGAAACCGACACCGCCCCGCCACGCCAAGGCAATGGGCGCCACCACGCAGCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCGGGAACGCGCGCCGACGCCCCGCGCTCCGCCGGCGTCCGCCCGTCCCCGCGCGCCCCCTCGCACCCCACGCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGGGAGGCGGGGCCGGCGGGGGCGCGCGCGGGGCCGCGGGTAGGGGGGCGGGGCGGCAGAGCTCGGCGGCTGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACTGGAGGACAGCGGTGGCGGAGGCGACTAGCGGCGGCGGGAGCGGCGCCGAGAGGCCGTGCGGGACGCGGGCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCAGGACCGGCCGAACGCAGAGGTTGATTCTTCACCACACTGAAACCATTAGGAAAAATCCTTGTGGTTAACAG  666

Query    1  ------------------------------------------------ATGGCGACTGATACGTCTCAAGGTGA  26
                                                            ||||||||||||||||||||||||||
Sbjct  667  CAGAGGCTTCAGAGTGTAACCTGTACTCGGGCCTAGAAATTATTTAAAATGGCGACTGATACGTCTCAAGGTGA  740

Query   27  ACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAGTTAGGTGAGAAGG  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAGTTAGGTGAGAAGG  814

Query  101  TAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCT  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCT  888

Query  175  GAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAA  962

Query  249  TGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAGAAA  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAGAAA  1036

Query  323  ATAAGTCTTCTGAGGAAACCAAAAAGGA-GA----------------------GAGCTGATAGT----------  363
            |||||||||||||||||||||||||||| ||                      |||..||.|||          
Sbjct 1037  ATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACA  1110

Query  364  ATTCATTCC------ACTCTTT---TCA------TAATTGGTCAG--------AACAGT---------------  399
            ||||.||||      ||.||||   .||      ||    |.|||        ||||..               
Sbjct 1111  ATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTA----GCCAGGGCCCAGAAACAAACACCGATGGCTTCTT  1180

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1181  CCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTG  1254

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1255  GTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACA  1328

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1329  AGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTG  1402

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1403  TGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAA  1476

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1477  CCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAG  1550

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1551  TCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACG  1624

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1625  CTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCCAGGAA  1698

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1699  CTCCGACCCACCTGGTGCAGAGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTTGTCTTGATGCTTTTCTCTT  1772

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1773  CCTCCTTGGAAAACAGCTGAAGAAATCAGGGGAGAAACCCCTGCTTGGTGGAAGCCTGATGGAATATGCAATCT  1846

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1847  TGTCTGCCATTGCTGCCATGAATGAGCCGAAGACCTGCTCTACCACTGCTCTGAAGAAGTATGTCCTAGAGAAT  1920

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1921  CACCCAGGAACCAATTCTAACTATCAAATGCATTTGCTGAAAAAAACCCTGCAGAAATGCGAAAAGAATGGGTG  1994

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1995  GATGGAACAGATCTCTGGGAAAGGGTTCAGTGGCACCTTCCAGCTCTGTTTTCCCTATTATCCCAGCCCAGGAG  2068

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2069  TTCTGTTTCCGAAGAAAGAGCCAGATGATTCTAGAGATGAGGATGAAGATGAAGATGAGTCATCAGAAGAAGAC  2142

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2143  TCTGAGGATGAAGAGCCGCCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGC  2216

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2217  ATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGC  2290

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2291  CTAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACCT  2364

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2365  AGTGGTGGCTCCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAATTGCCGGGCAAGGGCAAATCCAC  2438

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2439  CATGAAGAAGTCTTTCAGAGTGAAAAAGTAAATTTTATAGGAAAAAAGGGTATCATGATGAAATTCAAAATCTT  2512

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2513  ATTTTCTAAGGTCAGTGTGCATTTGTTTAGTTTTGATGCTTTTCAAATTACATTATTTTCCTCCCCTATGAACA  2586

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2587  TTGTGGGGAGGGACTCTAAATAAACCAGTTTAGGCATTTGCTAGCTTTAGGTGCTTTTATTGGTGCCTGCCCTT  2660

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2661  TTCCTTGTTCATTTTAATTTCTGCAATAATCCTGGACTTTCCTAAACTATGTAATGTATACTTGTCCTTTTTCT  2734

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2735  CTGCCTCCCCCAACCCCCTGTTGTTTTTATGGTCAGCTTTGCCTTTTTTTTTTCTTCCAATTTTATCTAAACAG  2808

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2809  TTGCAGAGATTTTTATATTTGTAGAAAGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAGTAAAATGGAGGC  2882

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2883  ACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATAATTAATCTTAT  2956

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 2957  TTATAAAAGCCACTCCACTAACCTTTTCTCTCCAACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAAC  3030

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3031  AGGGTGATCTCATTAGATTTTGAAGATATATGACTCCTTTGGGCTACATTTCATATTGATCAATTTCTAGGTAT  3104

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3105  TTTTCACTGGCCCAAAGTATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTATATCACTTGTTTTTTGTTGTT  3178

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3179  GTTGTTGTTGTCGTCGTTGTTTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGCAGTGGTGCAATCTCAGCT  3252

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3253  CACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGTGT  3326

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3327  GTACCACCACGCCTGGCAATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCGTGTTGGTCAGGCTGGTCTC  3400

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3401  GAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACTGTGC  3474

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3475  CTGGCCTATCCCACTTGGTTTTTGACTGAAGGGGAAGTGTAGAAATATATTGATTTGTGATTTCTGGTGTCACC  3548

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3549  TGTGTTACCAAAAATCAAAACAAATCTTTTTTATTTTTTATTATTATTATTATTTTTGAGACAGAGTCTCGCTC  3622

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3623  TGTCGCCCAGTGTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAGGTTCAAGCGATTCT  3696

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3697  CCCACCTCAGCCTCCTGAGTTGGGTCCTACAGGCGCACACGACCACGCCCAGCTAATTTTTTGTATTTTTAGTA  3770

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3771  GAGTTGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACTCACCTCAGCCTCCC  3844

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3845  AAAATCCTGGGGTTACAGATGTGAGCTACCACTCACGGCCCAAATCTTCTTGATCATATGTTTAAATATATTTT  3918

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3919  TTAATATTTGGAGCATGAGTTGTCACTTCTTGTTTGCCTTTTTTATAAGGAAATGTTGGAGAGTTACATCATTG  3992

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3993  CTAATGTAGAAATGTTAAGTGGAAAAATATACAGTTTGGTAAAATAAACTAGATTCTACATTTATTTGTGGGTT  4066

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4067  TTTTTCCCCTCCTTTCTTTCCACAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTGAGATATTAAAAAAAA  4140

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4141  AAAGAAAAGGAAAAAAGTAAATGAAGCCCAACTACCTAACCCTTTCTTATTTGTATTTGTTTTAGTATTGTGAA  4214

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4215  GTTGTGTTAAATAGTACTAGCTAGAAATACAAATTTCTGGTTATCATTTCTCTTCCCTGTGGCACTTGACATTT  4288

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4289  TAATTGTCTTAAAGTTTTTGAAGTACATCTTCTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCT  4362

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4363  TATTCATTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAATGGACTTGAGAAGAT  4436

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4437  TGGCTTGAATTAGATCATAATCATGTGTGATCCCATCATGAATTCATTGGAATTTGTGTTGCATGTAAGGCAAT  4510

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4511  CTTTCCTGTTGTAAATCTTCCTTTTTTAATGTACATATATTTTGAAAAATATGAATAAACATGAAATTTTAAAA  4584

Query  400  -----  399
                 
Sbjct 4585  GCTGC  4589

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