Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11931
Subject:
XM_030253218.1
Aligned Length:
1673
Identities:
883
Gaps:
694

Alignment

Query    1  ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT  74
            |||||.|||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.||||||||
Sbjct    1  ATGGCAACTGATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGAT  74

Query   75  CCACGCGGACAAGTTAGGTGAG---GTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG  145
            ||||||||||||||||||||||   |.||||||||.|||||||||.||.||||||.|.||||||||||||||||
Sbjct   75  CCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGG  148

Query  146  AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT  219
            |||||||.|||||||||||.|||||||||||||||||||||||.||                            
Sbjct  149  AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC----------------------------  194

Query  220  GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA  293
                       |||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct  195  -----------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA  257

Query  294  ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGT  361
            .|||||||.||.|||||||||||      |.||.||||||.||||||||.||||||||||||||||.|||||||
Sbjct  258  GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGAAGGATCAGT  331

Query  362  CTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGG  435
            ||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.|||||||||||||||||||||
Sbjct  332  CTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTCTCTGCCAGCCAGCTAGCCAGG  405

Query  436  GCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGC  509
            |||||||.||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct  406  GCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAATCTTAACTGAGGCCATTAAGGC  479

Query  510  ATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGC  583
            ||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.||||||||.||.|||||||..|
Sbjct  480  ATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTCATAAGTACCCGTCTCTGGGTC  553

Query  584  TGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAA  657
            |||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||||||||||||.||||||.|||
Sbjct  554  TGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGAGGAGTCATCAGACAGGTAAAA  627

Query  658  GGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAA  731
            |||||||||||.|||||.||||||||||||||.||||||||   ||||.|||||||||||||||.|||||||||
Sbjct  628  GGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACCTCAGAAATCCAAAAACAGAAA  698

Query  732  GAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCC  805
            |||   |.||||.||..|||||||||||||||||||||||.||||.|||||.|||||..||||.||||||||.|
Sbjct  699  GAA---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCCCGTTGGCTTTTACTCGGC  769

Query  806  TTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTG  879
            |.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct  770  TCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTATTACCCTAAGCTCAGAGTG  843

Query  880  GACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGG  953
            |||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||||||.|.||.|||||||||||
Sbjct  844  GACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCAGCTCGAGCAGATAACTGG  917

Query  954  CAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC--------GTG---------------  996
            |||.|||||||||||||||||.|      ||||||  ||||....|||        |||               
Sbjct  918  CAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGGGTGGAAGCCTGATGGAAT  991

Query  997  ------------------TTGC--CCAGG-------------------------CTACTCTTGAA-------CT  1018
                              ||||  |||.|                         ||.||| ||||       .|
Sbjct  992  ATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACTGCTC-TGAAGAAGTATGT  1064

Query 1019  CCTGGGTTCAG---------------------------------------------------------------  1029
            |||||    ||                                                               
Sbjct 1065  CCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAACCCTGCAGAAATGT  1134

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1135  GAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGTCCTTCCCCTACTA  1208

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1209  CCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAAGATGACGATGACG  1282

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1283  ATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAAAACACCAGCCAAG  1356

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1357  TCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGGCTGCCCAGAGAGG  1430

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1431  GAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCCAGACCCTCTCCCT  1504

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1505  CAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGAAGCGAAACTGCCC  1578

Query 1030  ---------------------------------------------  1029
                                                         
Sbjct 1579  GGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG  1623

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