Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11945
- Subject:
- XM_006503827.4
- Aligned Length:
- 1504
- Identities:
- 568
- Gaps:
- 869
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACCCGGAGAGCTTCGCGGCGGGCGAGCGGCGGGTGTCTCCGGCTTACGTGAGGCAGGGCTGCGAGGCTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCGCCCACGAGCACCTCATCCGGCTGCTTCTAGAGCAGGGCAAGTGTCCAGAGGATGGCTGGGATGAAAGTA 148
Query 1 --------------------------------ATGGACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGAA 42
|||||.||||||||||||||.||.||||||||||||||||||
Sbjct 149 CCCTCGAACTCTTTCTGCATGAGCTTGCAGTCATGGATAGCAACAATTTCTTGGGTAATTGTGGTGTGGGAGAA 222
Query 43 AGGGAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGTCATTACAGGTTCATTCATGGCATTGGACGATCCGG 116
|||||||||||||||||.||.||..||||||||||.||.||||||||||||||.||.||.||||||||||||||
Sbjct 223 AGGGAAGGGAGAGTGGCCTCTGCTTTGGTTGCTCGACGACATTACAGGTTCATCCACGGAATTGGACGATCCGG 296
Query 117 TGATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTGAACAAAATTACCAATTCTTTGGTCCTGG 190
||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||..
Sbjct 297 TGATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTCTTGAACAAAATTACTAATTCTTTGGTGCTTA 370
Query 191 ACATTATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAGTCTA 264
|..|.||||||||.||||||||.|||.||||.||||..||||||||||||||||||||||||||.|||||||||
Sbjct 371 ATGTCATAAAGCTTGCTGGTGTTCATTCAGTGGCCAGTTGCTTTGTAGTTCCTATGGCAACTGGGATGAGTCTA 444
Query 265 ACTCTGTGTTTCTTAACATTACGACACAAAAGACCAAAGGCAAAGTATATTATATGGCCACGAATAGACCAGAA 338
||..||||||||.|.|||.||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||
Sbjct 445 ACCTTGTGTTTCCTGACACTACGACACAAAAGACCAAAGGCCAAGTATATCATATGGCCACGGATAGACCAGAA 518
Query 339 GTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGATAGAAAATGTTTTGGAAGGTGACGAGC 412
||||||||||||.||||||.||||||||||||||||.||.|||||.||||||||.||.|||||||||||.||||
Sbjct 519 GTCCTGCTTTAAGTCCATGGTCACTGCAGGTTTTGAACCCGTGGTAATAGAAAACGTATTGGAAGGTGATGAGC 592
Query 413 TGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGATTGCATTCTGTGTATTCATTCT 486
||||.||||||||||||||.||||||||||||.|||||||.||.|||||.||...|||.|||||..||||||||
Sbjct 593 TGCGCACAGACCTGAAAGCCGTGGAGGCTAAAATCCAGGAGCTCGGGCCGGAGCACATCCTGTGCCTTCATTCT 666
Query 487 ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGATTAGAAGAACTGGCTGTGATTTGTGCTAATTATGACAT 560
||.|||.||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCACAGCCTGCTTTGCTCCAAGGGTGCCCGATAGATTAGAAGAACTGGCTGTGATTTGTGCTAATTATGACAT 740
Query 561 TCCACATATAGTTAATAATGCTTATGGAGTGCAGTCTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAG 634
|||||||.||||.||.||.|||||||||.|.||||||||||||||.||||||||||||||||||
Sbjct 741 TCCACATGTAGTCAACAACGCTTATGGATTACAGTCTTCAAAGTGCATGCATCTCATTCAGCAG---------- 804
Query 635 TTGGTAGAATAGATGCTTTTGTTCAG-AGCTTGGACAAAAATTTTATGGTTCCAGTAGGTGGTGCTATAATTGC 707
||||||.|| ||
Sbjct 805 -----------------TTTGTTGAGAAG--------------------------------------------- 816
Query 708 TGGCTTTAATGATTCATTCATTCAGGAAATCAGCAAGATGTATCCAGGAAGAGCTTCAGCTTCACCTTCTTTAG 781
Sbjct 817 -------------------------------------------------------------------------- 816
Query 782 ATGTCCTTATTACTTTATTGTCACTTGGATCAAATGGCTATAAGAAGCTACTAAAAGAAAGAAAGGAAATGTTT 855
Sbjct 817 -------------------------------------------------------------------------- 816
Query 856 TCATATTTGTCCAACCAAATAAAGAAGTTGTCAGAAGCCTACAATGAAAGACTGTTGCATACACCTCACAATCC 929
Sbjct 817 -------------------------------------------------------------------------- 816
Query 930 CATATCTTTAGCTATGACACTTAAAACACTAGATGAACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGC 1003
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1004 TTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC 1077
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1078 AGAGGCTTTATGTCACATACAAATAATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCATCGGAATGAAGAT 1151
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1152 GCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAGAAAAGAACGAAGTAAAGAGA 1225
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1226 GTGATGACAATTATGACAAAACTGAAGATGTGGATATTGAAGAAATGGCTTTAAAACTAGATAATGTACTTCTT 1299
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1300 GACACATACCAGGATGCTTCTTCA 1323
Sbjct 817 ------------------------ 816
