Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11946
- Subject:
- XM_006503827.4
- Aligned Length:
- 1531
- Identities:
- 687
- Gaps:
- 746
Alignment
Query 1 ATGCAGTGTGACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTCACGCCATTCGCC---TGCCTCAGCCT 71
|.||.|.||| || .||.||.||| |..||.| .||.| ||.|||.|.||
Sbjct 1 ----------ATGAACCCGG--------AG----AGCTTCGCGG---CGGGCGA-GCGGCGGGTGTCTCCGGCT 48
Query 72 CCCGAGTAGCTGGGACTAC-AGGC---GCCCGC-------CACCACACCC----------------GGGCAAGT 118
..||.|..||.||| ||.| |||| ||.||| ||||.||.|| ||||||||
Sbjct 49 TACGTGAGGCAGGG-CTGCGAGGCTCGGCGCGCCCACGAGCACCTCATCCGGCTGCTTCTAGAGCAGGGCAAGT 121
Query 119 GTCCAGAGAATGGCTGGGATGAAAGTACACTTGAACTCTTTTTACATGAACTTGCAATCATGGACAGCAACAAT 192
||||||||.|||||||||||||||||||.||.|||||||||.|.|||||.||||||.|||||||.|||||||||
Sbjct 122 GTCCAGAGGATGGCTGGGATGAAAGTACCCTCGAACTCTTTCTGCATGAGCTTGCAGTCATGGATAGCAACAAT 195
Query 193 TTCTTAGGCAATTGTGGTGTGGGAGAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGTCATTACAG 266
|||||.||.|||||||||||||||||||||||||||||||||||.||.||..||||||||||.||.||||||||
Sbjct 196 TTCTTGGGTAATTGTGGTGTGGGAGAAAGGGAAGGGAGAGTGGCCTCTGCTTTGGTTGCTCGACGACATTACAG 269
Query 267 GTTCATTCATGGCATTGGACGATCCGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTGA 340
||||||.||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 270 GTTCATCCACGGAATTGGACGATCCGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTCTTGA 343
Query 341 ACAAAATTACCAATTCTTTGGTCCTGGACATTATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTGCTTTGTA 414
||||||||||.|||||||||||.||..|..|.||||||||.||||||||.|||.||||.||||..|||||||||
Sbjct 344 ACAAAATTACTAATTCTTTGGTGCTTAATGTCATAAAGCTTGCTGGTGTTCATTCAGTGGCCAGTTGCTTTGTA 417
Query 415 GTTCCTATGGCAACTGGTATGAGTCTAACTCTGTGTTTCTTAACATTACGACACAAAAGACCAAAGGCAAAGTA 488
|||||||||||||||||.|||||||||||..||||||||.|.|||.||||||||||||||||||||||.|||||
Sbjct 418 GTTCCTATGGCAACTGGGATGAGTCTAACCTTGTGTTTCCTGACACTACGACACAAAAGACCAAAGGCCAAGTA 491
Query 489 TATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGA 562
|||.|||||||||||.|||||||||||||||||||||||.||||||.||||||||||||||||.||.|||||.|
Sbjct 492 TATCATATGGCCACGGATAGACCAGAAGTCCTGCTTTAAGTCCATGGTCACTGCAGGTTTTGAACCCGTGGTAA 565
Query 563 TAGAAAATGTTTTGGAAGGTGACGAGCTGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCAGGAACTTGGG 636
|||||||.||.|||||||||||.||||||||.||||||||||||||.||||||||||||.|||||||.||.|||
Sbjct 566 TAGAAAACGTATTGGAAGGTGATGAGCTGCGCACAGACCTGAAAGCCGTGGAGGCTAAAATCCAGGAGCTCGGG 639
Query 637 CCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGATTAGAAGAACT 710
||.||...|||.|||||..||||||||||.|||.||||.|||||||||||||||||.|||||||||||||||||
Sbjct 640 CCGGAGCACATCCTGTGCCTTCATTCTACCACAGCCTGCTTTGCTCCAAGGGTGCCCGATAGATTAGAAGAACT 713
Query 711 GGCTGTGATTTGTGCTAATTATGACATTCCACATATAGTTAATAATGCTTATGGAGTGCAGTCTTCAAAGTGTA 784
||||||||||||||||||||||||||||||||||.||||.||.||.|||||||||.|.||||||||||||||.|
Sbjct 714 GGCTGTGATTTGTGCTAATTATGACATTCCACATGTAGTCAACAACGCTTATGGATTACAGTCTTCAAAGTGCA 787
Query 785 TGCATCTCATTCAGCAGGGGGCTCGAGTTGGTAGAATAGATGCTTTTGTTCAG-AGCTTGGACAAAAATTTTAT 857
||||||||||||||||| ||||||.|| ||
Sbjct 788 TGCATCTCATTCAGCAG---------------------------TTTGTTGAGAAG------------------ 816
Query 858 GGTTCCAGTAGGTGGTGCTATAATTGCTGGCTTTAATGATTCATTCATTCAGGAAATCAGCAAGATGTATCCAG 931
Sbjct 817 -------------------------------------------------------------------------- 816
Query 932 GAAGAGCTTCAGCTTCACCTTCTTTAGATGTCCTTATTACTTTATTGTCACTTGGATCAAATGGCTATAAGAAG 1005
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1006 CTACTAAAAGAAAGAAAGGAAATGTTTTCATATTTGTCCAACCAAATAAAGAAGTTGTCAGAAGCCTACAATGA 1079
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1080 AAGACTGTTGCATACACCTCACAATCCCATATCTTTAGCTATGACACTTAAAACACTAGATGAACACCGTGACA 1153
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1154 AAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCC 1227
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1228 ATGCAAACTGTGAGTGGCTATACTTTCAGAGGCTTTATGTCACATACAAATAATTACCCTTGTGCTTACCTCAA 1301
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1302 TGCTGCATCAGCCATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGG 1375
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1376 CAGTAAGAAAAGAACGAAGTAAAGAGAGTGATGACAATTATGACAAAACTGAAGATGTGGATATTGAAGAAATG 1449
Sbjct 817 -------------------------------------------------------------------------- 816
Query 1450 GCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCA 1500
Sbjct 817 --------------------------------------------------- 816
