Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11946
Subject:
XM_017008277.1
Aligned Length:
1758
Identities:
1500
Gaps:
258

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAACCGCGAGAGCTTCGCGGCGGGAGAGCGGCTGGTGTCGCCGGCTTACGTGCGGCAGGGCTGTGAGGCCCG  74

Query    1  ------------------------------------------------------------------ATGCAGTG  8
                                                                              ||||||||
Sbjct   75  CCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGAGTCTCGCTCTTTCGCCCAGGCTGGAATGCAGTG  148

Query    9  TGACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTCACGCCATTCGCCTGCCTCAGCCTCCCGAGTAGCT  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTCACGCCATTCGCCTGCCTCAGCCTCCCGAGTAGCT  222

Query   83  GGGACTACAGGCGCCCGCCACCACACCCG---------------------------------------------  111
            |||||||||||||||||||||||||||||                                             
Sbjct  223  GGGACTACAGGCGCCCGCCACCACACCCGGTTAATGTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGG  296

Query  112  -------------------------------------------------------------------------G  112
                                                                                     |
Sbjct  297  CCAGGCTGATCTCAAACTCCTGACTTCAAGTGATCGGCCATTCTTGGCCTTCCAAAGTGCTCGGATTACAGGCG  370

Query  113  GCAAGTGTCCAGAGAATGGCTGGGATGAAAGTACACTTGAACTCTTTTTACATGAACTTGCAATCATGGACAGC  186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCAAGTGTCCAGAGAATGGCTGGGATGAAAGTACACTTGAACTCTTTTTACATGAACTTGCAATCATGGACAGC  444

Query  187  AACAATTTCTTAGGCAATTGTGGTGTGGGAGAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGTCA  260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AACAATTTCTTAGGCAATTGTGGTGTGGGAGAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGTCA  518

Query  261  TTACAGGTTCATTCATGGCATTGGACGATCCGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCC  334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTACAGGTTCATTCATGGCATTGGACGATCCGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCC  592

Query  335  TTTTGAACAAAATTACCAATTCTTTGGTCCTGGACATTATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTGC  408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTTTGAACAAAATTACCAATTCTTTGGTCCTGGACATTATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTGC  666

Query  409  TTTGTAGTTCCTATGGCAACTGGTATGAGTCTAACTCTGTGTTTCTTAACATTACGACACAAAAGACCAAAGGC  482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTGTAGTTCCTATGGCAACTGGTATGAGTCTAACTCTGTGTTTCTTAACATTACGACACAAAAGACCAAAGGC  740

Query  483  AAAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTG  556
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTG  814

Query  557  TGGTGATAGAAAATGTTTTGGAAGGTGACGAGCTGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCAGGAA  630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGTGATAGAAAATGTTTTGGAAGGTGACGAGCTGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCAGGAA  888

Query  631  CTTGGGCCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGATTAGA  704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTTGGGCCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGATTAGA  962

Query  705  AGAACTGGCTGTGATTTGTGCTAATTATGACATTCCACATATAGTTAATAATGCTTATGGAGTGCAGTCTTCAA  778
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAACTGGCTGTGATTTGTGCTAATTATGACATTCCACATATAGTTAATAATGCTTATGGAGTGCAGTCTTCAA  1036

Query  779  AGTGTATGCATCTCATTCAGCAGGGGGCTCGAGTTGGTAGAATAGATGCTTTTGTTCAGAGCTTGGACAAAAAT  852
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGTGTATGCATCTCATTCAGCAGGGGGCTCGAGTTGGTAGAATAGATGCTTTTGTTCAGAGCTTGGACAAAAAT  1110

Query  853  TTTATGGTTCCAGTAGGTGGTGCTATAATTGCTGGCTTTAATGATTCATTCATTCAGGAAATCAGCAAGATGTA  926
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTTATGGTTCCAGTAGGTGGTGCTATAATTGCTGGCTTTAATGATTCATTCATTCAGGAAATCAGCAAGATGTA  1184

Query  927  TCCAGGAAGAGCTTCAGCTTCACCTTCTTTAGATGTCCTTATTACTTTATTGTCACTTGGATCAAATGGCTATA  1000
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCCAGGAAGAGCTTCAGCTTCACCTTCTTTAGATGTCCTTATTACTTTATTGTCACTTGGATCAAATGGCTATA  1258

Query 1001  AGAAGCTACTAAAAGAAAGAAAGGAAATGTTTTCATATTTGTCCAACCAAATAAAGAAGTTGTCAGAAGCCTAC  1074
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGAAGCTACTAAAAGAAAGAAAGGAAATGTTTTCATATTTGTCCAACCAAATAAAGAAGTTGTCAGAAGCCTAC  1332

Query 1075  AATGAAAGACTGTTGCATACACCTCACAATCCCATATCTTTAGCTATGACACTTAAAACACTAGATGAACACCG  1148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AATGAAAGACTGTTGCATACACCTCACAATCCCATATCTTTAGCTATGACACTTAAAACACTAGATGAACACCG  1406

Query 1149  TGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG  1222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG  1480

Query 1223  GGTCCATGCAAACTGTGAGTGGCTATACTTTCAGAGGCTTTATGTCACATACAAATAATTACCCTTGTGCTTAC  1296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GGTCCATGCAAACTGTGAGTGGCTATACTTTCAGAGGCTTTATGTCACATACAAATAATTACCCTTGTGCTTAC  1554

Query 1297  CTCAATGCTGCATCAGCCATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTT  1370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTCAATGCTGCATCAGCCATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTT  1628

Query 1371  AAAGGCAGTAAGAAAAGAACGAAGTAAAGAGAGTGATGACAATTATGACAAAACTGAAGATGTGGATATTGAAG  1444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAAGGCAGTAAGAAAAGAACGAAGTAAAGAGAGTGATGACAATTATGACAAAACTGAAGATGTGGATATTGAAG  1702

Query 1445  AAATGGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCA  1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AAATGGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCA  1758

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