Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11953
Subject:
XM_024449002.1
Aligned Length:
2110
Identities:
1680
Gaps:
413

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTTGTCAGCACATTTACCGATATGGACACTTTTCCCAATAATTTTCCTCCTGGTGGAGACAGTGGATTGAC  74

Query    1  -------------------------ATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATC  49
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGGTTCTCAGTCGGAGTTCCAGAAAATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATC  148

Query   50  AGACACTGAAGGCTGAACACACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTT  123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGACACTGAAGGCTGAACACACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTT  222

Query  124  AATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAAC  197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAAC  296

Query  198  TAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAAC  271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAAC  370

Query  272  AAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATAT  345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATAT  444

Query  346  AATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTT  419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTT  518

Query  420  AGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGC  493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGC  592

Query  494  TGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAA  567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAA  666

Query  568  AAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAA  641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAA  740

Query  642  TGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAAT  715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAAT  814

Query  716  CAGCTAATTTACGGGCAGAACGCTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAAT  789
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGCTAATTTACGGGCAGAACGTTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAAT  888

Query  790  AAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACT  863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACT  962

Query  864  GGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAA  937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAA  1036

Query  938  GTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTGCTCTTAGTA  1011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTGCTCTTAGTA  1110

Query 1012  GAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACA  1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACA  1184

Query 1086  AGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGC  1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGC  1258

Query 1160  AATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGGAAGGAGCTT  1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGGAAGGAGCTT  1332

Query 1234  CAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTC  1307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CAGAGTGTTAGGTTAAAACTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTC  1406

Query 1308  TGACCTAAAACAGCAAATCAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGA  1381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGACCTAAAACAGCAAATCAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGA  1480

Query 1382  ATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAA  1455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAA  1554

Query 1456  AAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCA  1529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AAAGCGCAACTAGAAGCTGAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCA  1628

Query 1530  TGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCAGA  1603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGAGCGTATCACAGACAGAGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCAGA  1702

Query 1604  AAAAG---------CTTGA---------------------ACAGGA-----------TCTT-------------  1623
            |||||         |||.|                     |||.||           ||||             
Sbjct 1703  AAAAGAGAAAATCTCTTCATGAAAACAAATTGAAAAGACTACAAGAGAAAGTAGAAGTCTTGGAGGCAAAGAAA  1776

Query 1624  ---GAGTTGG-----------------------------GATG-CCCTTCTG-TGACTGATAC-----------  1652
               ||.||||                             .||| .||||.|| .|||| ||||           
Sbjct 1777  GAAGAATTGGAAACAGAAAATCAGGTCTTAAATAGACAAAATGTTCCTTTTGAAGACT-ATACAAGGCTTCAAA  1849

Query 1653  --------------ATACAGAGA-----------------GAGTGTA-------TTCCCCCCA--CCCCCATTG  1686
                          |||||||||                 .|||.||       ||||...||  ||.|||   
Sbjct 1850  AAAGACTAAAAGATATACAGAGAAGACATAATGAATTTCGAAGTCTAATTTTGGTTCCTAACATGCCTCCA---  1920

Query 1687  AAGAGAG-ATCT--------------CTTGAAG-----------------------------------------  1704
               |.|| ||||              |||..||                                         
Sbjct 1921  ---ACAGCATCTATCAATCCTGTTAGCTTTCAGTCATCAGCCATGGTTCCAAGCATGGAACTACCATTTCCTCC  1991

Query 1705  --------------------------------------------------------------------------  1704
                                                                                      
Sbjct 1992  TCATATGCAGGAGGAACAACATCAAAGGGAACTCTCTCTACTTCGCAAAAGACTAGAAGAACTGGAAACAACAC  2065

Query 1705  --------------------------------------  1704
                                                  
Sbjct 2066  AAAGAAAACAACTAGAGGAACTTGGATCTTCCGGAGAA  2103

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