Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11975
- Subject:
- XR_001756212.2
- Aligned Length:
- 2676
- Identities:
- 477
- Gaps:
- 2196
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCTTACTCTTCTTTGCATTGGCCAGATATGTCGTCACTCACAAAACTTCGAGCTCATTGGTGCAAAAGCTCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGCGGTGGGTGATTGGTTGGTTGCTGTTCCTGCCCCCACGCCTGTCGTGGTTTAGCTGAACTGAGCTGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCTAAAGGCCGCGGAGTCGGCGGTGTTGTAGGTAGCGGTACCTTGAGTGGCAACAGAATTCGATTAAATTACA 222
Query 1 ---------------------------------------------------ATGCGGATTCTTATATTGAGTTT 23
|||||||||||||||||||||||
Sbjct 223 ATGGGAAACATTTTTGAAAAGCTCTTTAAAAGTCTACTTGGGAAAAAAAAGATGCGGATTCTTATATTGAGTTT 296
Query 24 GGATACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAG 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGATACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAG 370
Query 98 GTTTCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGCTGTCTGGGATGTTGGCAGCCACTTCAAAATC 171
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 371 GTTTCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGGTGTCTGGGATGTTGGCAGCCACTTCAAAATC 444
Query 172 AGACCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACT 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGACCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACT 518
Query 246 TGCCAGCGGGGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTT 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCCAGCGGGGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTT 592
Query 320 TCCTCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCTCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCC 666
Query 394 TGGGGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATC 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGGGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATC 740
Query 468 AGCTGTGGT---AAAG---------------------------------------------------------- 480
||||||||| ..||
Sbjct 741 AGCTGTGGTTCGTGAGCCACACATCTCCCCACACCAAGCTCCTCCATACAAGACCTCGGACTGCATCAGAGCTA 814
Query 481 -------------------------------------------------------------------------- 480
Sbjct 815 TCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGATGAGGCATCTCCTGG 888
Query 481 -------------------------------------------------------------------------- 480
Sbjct 889 AAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATGCTGGTCTCGAAC 962
Query 481 -------------------------------------------------------------------------- 480
Sbjct 963 TCCTGGCTTGAAGTGATCCTTCTGTCTTGGCCTCCCGAAATGCTGAGATTTCAAGCGTGAGTCATCATGTCTGG 1036
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1037 TCTCACAGCTCAGTTTTTAACATATGTATGAAATATCAACTGTGTTTGGTTCAAAGGACTTTATGATCTTACAG 1110
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1111 ATAGGAACTAAGGAATAATAACGTAAGAAATAAAAAATGTGGAAATAAAAATGTTCAGTCATAACATGATTAAA 1184
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1185 AGGTAAGGCACCAGGTGGGGGGTCGAAGTAAGTTCAAATCCAAAATAGAGACCACTGGGCTAGTAGACACTTCA 1258
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1259 CATTAGAAGCATGGCTAGGTGTCTACTCCCTGAGAACCAAAATTCCACCAGATACAATGAACAAAGCTTTAGAG 1332
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1333 AGAGAAAACATTTGAACATTTTACGGGCAGAAAATGGCCCACATACTCTATAGACAATACAATTTCCTTCAAGG 1406
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1407 CAAACTAGAACTATAAGGCTTTTGGTCTAAGAAGTGAGTGTGTGCAAGGGATACCTTTGCATACTAGGGAGGGG 1480
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1481 TAGACAACCCACACATTTAGCTTGGTTATTAAATGTCATTACTCAGACTTGACAGTTGATGACCAAGGAAGTAA 1554
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1555 GACTTTCACTAGAAGGGCTGCCCAGGTTGGAAAGCTGAGAGCAATCAGGGCCACCTCTTACAAGCAAATAAAGG 1628
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1629 TCTGTAGTAACTTAATTACAATCTCAGTCTCTAAGCCTTCAGGGTTGTGAAGCAGAAAGGCAACTCTGTTCAGG 1702
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1703 GACTCGTTAAACACCAGGTTTCCTTTGGGCACAGGCTATGACATTTGTGCCACTGTAGAACTGAATAGGAAATA 1776
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1777 CAAGCAGTGCCATTCAACAGCATGACCACTTCCAAGGCTCACAGCAAAGCAGCTGATTATTGTATAAGAATCAT 1850
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1851 ATTTGGCCAATATGTCAGTGCCAGAAATGAGAGCTGGAACTGAATTCTCGATTCGAGAAACATAATCTAATAAA 1924
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1925 TTCTTCAGCAGAGTTTATTTATTCAGAGAGAAAACAATCACAACAATAGCATATTTTGTCTGCTTACCTTGTAA 1998
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1999 GTATAGTTCTGAGTTTTTACACTTGTCATCTCATTTTTTCTTACAATATCCGCAATAAGGTTGATTGGATTACT 2072
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2073 AACCCCAGTTTGCAGATAAAGATTGCAGCTTAGAGATATTAAATATCTTCAAATCTCTCTGGCCATAAGACCTA 2146
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2147 AAACTGCATACAAAAATCTAAGAGACAGAGTTAGGACTCAAATCCATGTGTCCAGGGCTTATAATCACTATTCT 2220
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2221 GTACGATAGGCATGCAATTAAAGAAGACCTGCCTCAAACATTTTCTGTGTGACCTGAGGCAAGTCCTTTTATAG 2294
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2295 CTATAAACTAGGGACAATATTTGCTGTCATTTTTTCTACAAATGTCACAAAGAACAAATTTGAGCCTGTCGCTG 2368
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2369 TGAAAGAACTTAGCAAATGAAAGCATCCTAGGGAGTGTTTTAGATATCGATATTTTTATCCAATTAACTTTTCA 2442
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2443 AAATGAGTTTATTTGCTCACTGAAACTGAAGTACTTCAACGACGATTAAGGAAGTTTTACCTAGAACCACAATC 2516
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2517 AACAGTTTCTGGAATGCATCTGACAAAGCCTTCTCAATAGCAATCTGGGCTATCTTCCCTTTCATAGGAATGAC 2590
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2591 AACGGTCTTAAATCCAACCCAAACTAATGGATTTAAGATGCCTATCTGAGTGATCATTGCTACATGTTGGTTAA 2664
Query 481 ------------ 480
Sbjct 2665 AAAATAAAAATG 2676
