Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11975
- Subject:
- XR_001756216.2
- Aligned Length:
- 2615
- Identities:
- 475
- Gaps:
- 2139
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTACTCTTCTTTGCATTGGCCAGATATGTCGTCACTCACAAAACTTCGAGCTCATTGGTGCAAAAGCTCCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCGGTGGGTGATTGGTTGGTTGCTGTTCCTGCCCCCACGCCTGTCGTGGTTTAGCTGAACTGAGCTGAAATCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAAGGCCGCGGAGTCGGCGGTGTTGTAGGTAGCGGTACCTTGAGTGGCAACAGAATTCGATTAAATTACAATG 222
Query 1 ------------------------------------------------ATGCGGATTCTTATATTGAGTTTGGA 26
||||||||||||||||||||||||||
Sbjct 223 GGAAACATTTTTGAAAAGCTCTTTAAAAGTCTACTTGGGAAAAAAAAGATGCGGATTCTTATATTGAGTTTGGA 296
Query 27 TACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAGGTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAGGTT 370
Query 101 TCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGCTGTCTGGGATGTTGGCAGCCACTTCAAAATCAGA 174
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 371 TCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGGTGTCTGGGATGTTGGCAGCCACTTCAAAATCAGA 444
Query 175 CCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGC 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGC 518
Query 249 CAGCGGGGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCC 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGCGGGGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCC 592
Query 323 TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGG 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGG 666
Query 397 GGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGC 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGC 740
Query 471 TGTGGTAAAG---------------------------------------------------------------- 480
|||| ||
Sbjct 741 TGTG----AGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGATG 810
Query 481 -------------------------------------------------------------------------- 480
Sbjct 811 AGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAAT 884
Query 481 -------------------------------------------------------------------------- 480
Sbjct 885 GCTGGTCTCGAACTCCTGGCTTGAAGTGATCCTTCTGTCTTGGCCTCCCGAAATGCTGAGATTTCAAGCGTGAG 958
Query 481 -------------------------------------------------------------------------- 480
Sbjct 959 TCATCATGTCTGGTCTCACAGCTCAGTTTTTAACATATGTATGAAATATCAACTGTGTTTGGTTCAAAGGACTT 1032
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1033 TATGATCTTACAGATAGGAACTAAGGAATAATAACGTAAGAAATAAAAAATGTGGAAATAAAAATGTTCAGTCA 1106
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1107 TAACATGATTAAAAGGTAAGGCACCAGGTGGGGGGTCGAAGTAAGTTCAAATCCAAAATAGAGACCACTGGGCT 1180
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1181 AGTAGACACTTCACATTAGAAGCATGGCTAGGTGTCTACTCCCTGAGAACCAAAATTCCACCAGATACAATGAA 1254
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1255 CAAAGCTTTAGAGAGAGAAAACATTTGAACATTTTACGGGCAGAAAATGGCCCACATACTCTATAGACAATACA 1328
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1329 ATTTCCTTCAAGGCAAACTAGAACTATAAGGCTTTTGGTCTAAGAAGTGAGTGTGTGCAAGGGATACCTTTGCA 1402
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1403 TACTAGGGAGGGGTAGACAACCCACACATTTAGCTTGGTTATTAAATGTCATTACTCAGACTTGACAGTTGATG 1476
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1477 ACCAAGGAAGTAAGACTTTCACTAGAAGGGCTGCCCAGGTTGGAAAGCTGAGAGCAATCAGGGCCACCTCTTAC 1550
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1551 AAGCAAATAAAGGTCTGTAGTAACTTAATTACAATCTCAGTCTCTAAGCCTTCAGGGTTGTGAAGCAGAAAGGC 1624
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1625 AACTCTGTTCAGGGACTCGTTAAACACCAGGTTTCCTTTGGGCACAGGCTATGACATTTGTGCCACTGTAGAAC 1698
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1699 TGAATAGGAAATACAAGCAGTGCCATTCAACAGCATGACCACTTCCAAGGCTCACAGCAAAGCAGCTGATTATT 1772
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1773 GTATAAGAATCATATTTGGCCAATATGTCAGTGCCAGAAATGAGAGCTGGAACTGAATTCTCGATTCGAGAAAC 1846
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1847 ATAATCTAATAAATTCTTCAGCAGAGTTTATTTATTCAGAGAGAAAACAATCACAACAATAGCATATTTTGTCT 1920
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1921 GCTTACCTTGTAAGTATAGTTCTGAGTTTTTACACTTGTCATCTCATTTTTTCTTACAATATCCGCAATAAGGT 1994
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1995 TGATTGGATTACTAACCCCAGTTTGCAGATAAAGATTGCAGCTTAGAGATATTAAATATCTTCAAATCTCTCTG 2068
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2069 GCCATAAGACCTAAAACTGCATACAAAAATCTAAGAGACAGAGTTAGGACTCAAATCCATGTGTCCAGGGCTTA 2142
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2143 TAATCACTATTCTGTACGATAGGCATGCAATTAAAGAAGACCTGCCTCAAACATTTTCTGTGTGACCTGAGGCA 2216
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2217 AGTCCTTTTATAGCTATAAACTAGGGACAATATTTGCTGTCATTTTTTCTACAAATGTCACAAAGAACAAATTT 2290
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2291 GAGCCTGTCGCTGTGAAAGAACTTAGCAAATGAAAGCATCCTAGGGAGTGTTTTAGATATCGATATTTTTATCC 2364
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2365 AATTAACTTTTCAAAATGAGTTTATTTGCTCACTGAAACTGAAGTACTTCAACGACGATTAAGGAAGTTTTACC 2438
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2439 TAGAACCACAATCAACAGTTTCTGGAATGCATCTGACAAAGCCTTCTCAATAGCAATCTGGGCTATCTTCCCTT 2512
Query 481 -------------------------------------------------------------------------- 480
Sbjct 2513 TCATAGGAATGACAACGGTCTTAAATCCAACCCAAACTAATGGATTTAAGATGCCTATCTGAGTGATCATTGCT 2586
Query 481 ------------------------- 480
Sbjct 2587 ACATGTTGGTTAAAAAATAAAAATG 2611
