Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12015
- Subject:
- XR_001780044.1
- Aligned Length:
- 2106
- Identities:
- 204
- Gaps:
- 1884
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTCTCCACGGGCGCACGGCATGCTGGGAAGGTGCCCGGGCGGCGGCCATTTTGTCTTCTCGGCTCCTCTCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGAGGCTTTTCGAGCTTGAGAGTGGGCCGAGGGGGCTTGGTTCGGCGGCCGGGCGGCTGGTGGGGTTTTTTAT 148
Query 1 -----------------------------------------------ATGATTTCGGCCGCGCAGTTGTTGGAT 27
||||||||.||||||||||||.|||||
Sbjct 149 CGGGTGGGTGCTAGGGCTGGCGTGAGCAGCCGCCCGGAGGAAGCACCATGATTTCTGCCGCGCAGTTGCTGGAT 222
Query 28 GAGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGT 101
||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 223 GAGTTAATGGGCCGGGACCGAAACCTCGCCCCGGATGAGAAGCGCAGCAACGTGCGCTGGGACCACGAGAGCGT 296
Query 102 TTGTAAATATTATCTCTGTGGTTTTTGTCCTGCGGAATTGTTCACAAATACACGTTCTGATCTTG----ATGTA 171
||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||| ||||
Sbjct 297 TTGTAAATATTATCTCTGCGGTTTTTGTCCTGCGGAATTGTTCACAAATACCCGTTCTGATCTTGGTCCATGT- 369
Query 172 TTTGGAAGAGGAGATAACATTAGTGATG------TCAGCAA--ATTTTTGGAAG------------ATGACAAG 225
||.||.|||..||||| |.||.|| |.|.|..|||| |||| |||
Sbjct 370 ------------GAAAAAATTCATGATGAAAATCTAAGAAAACAGTATGAGAAGAGTTCTCGCTTTATGA-AAG 430
Query 226 TGG---ATGGAG-GAG---------------------------------------------------------- 237
|.| || ||| |||
Sbjct 431 TTGGCTAT-GAGAGAGATTTTTTGCGATACTTACAGAGTTTACTTGCCGAGGTAGAGCGCAGAATTAGACGAGG 503
Query 238 -------------------------------------------------------------------------- 237
Sbjct 504 TCATGCTCGTTTGGCATTATCTCAAAATCAGCAGTCTTCTGGGGCTGCTGGTCCAACAGGCAAAAATGAAGAAA 577
Query 238 -------------------------------------------------------------------------- 237
Sbjct 578 AAATTCAGGTTCTGACAGACAAAATTGATGTGCTTCTACAGCAGATTGAAGAGTTAGGATCTGAAGGAAAGGTA 651
Query 238 -------------------------------------------------------------------------- 237
Sbjct 652 GAAGAAGCCCAGGGAATGATGAAATTGGTTGAACAGTTAAAGGAAGAGAGAGAATTACTAAGATCTACAACCTC 725
Query 238 -------------------------------------------------------------------------- 237
Sbjct 726 GACTATAGAAAGTTTTGCTGCCCAAGAAAAACAGATGGAAGTTTGTGAAGTGTGTGGAGCCTTTTTGATAGTAG 799
Query 238 -------------------------------------------------------------------------- 237
Sbjct 800 GAGACGCCCAGTCCCGAGTAGATGACCATCTGATGGGAAAGCAACACATGGGCTATGCCAAAATTAAAGCCACT 873
Query 238 -------------------------------------------------------------------------- 237
Sbjct 874 GTGGAAGAATTAAAAGAAAAGTTAAGAAAAAGAACAGAGGAACCTGATCGGGATGAACGTCTCAAAAAAGAGAA 947
Query 238 -------------------------------------------------------------------------- 237
Sbjct 948 GCAAGAAAGAGAGGAAAGAGAAAAAGAGCGGGAGAGAGAAAGAGAAGAACGGGAAAGAAAAAGACGAAGAGAAG 1021
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1022 AGGAAGAAAGGGAAAAAGAAAGAGCTCGTGACAGAGAAAGGAGAAAGAGAAGTCGTTCACGGAGTAGACACTCA 1095
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1096 AGCCGAACTTCTGACCGGAGATGCAGCAGGTCTCGGGACCACAAAAGATCACGGAGTAGAGACAGAAGGCGAAG 1169
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1170 CAGAAGTAGAGATCGACGAAGAAGCAGAAGCCATGACAGATCAGAAAGAAAACATAGATCTCGCAGTCGGGATC 1243
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1244 GAAGACGGTCAAAAAGCCGAGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGAACAAGATAGA 1317
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1318 AAGTCCAAGGAGAAAGGCCAGAAGATAAGATTTTTGGACTACTAGTCCTCTACGGAGCAACAAGACGACTCTTC 1391
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1392 CTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCTCAAAGGGAGGACTTTCCCACAAGAAAAGAAGGG 1465
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1466 ATCTGATGATAAAAAGAGTAGTGTGAAGTCCAGTAGTCGAGAAAAGCAGAGTGAAGACACAAACCCTGAATCGA 1539
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1540 AGGAAAGTGACACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGGTGACACTCAGTCCAAT 1613
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1614 TAAAACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTGAAGAGTTTTTGAAGAATACTGAAAACG 1687
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1688 GAATAAAGTGAAGATCAACATTAAAATGAGGTGAAAGAAAGCTATAGTGGCATAGAAAAAGTATAAAGCTCAGT 1761
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1762 TAGTTATTTGGTTTTTTTATTATTATTATTAAAAATTAATTCAGGACTGTTGTGACCTACCAGATTTCAGAACA 1835
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1836 TGTGTTAATAGCACATATGCCACTTTGAAAACTTAGGTCCTGTATCATATTTTTTCTTTAAGACTTTTTAAGAA 1909
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1910 ATATTACCTAAACATGTGGCTTGCTCAGTGTTTACTTGCAAGTTTTCAGTCTTGGACTTTGAAGCCAGGATTCC 1983
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1984 ACGTTAGTGCTCATGTGGAGCAGACTGGGGCTCCGTTTTACACTTGTGCTCTCCTTAGCCTTTGGATTTAGAAG 2057
Query 238 ---------------------------------- 237
Sbjct 2058 TGAAAATAAAGTATCTCTGACTTCCTGTTGCAGA 2091
