Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12015
- Subject:
- XR_002958022.1
- Aligned Length:
- 3713
- Identities:
- 236
- Gaps:
- 3476
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCGCGCGGCGGCCATTTTGTCTTGTCGGCTCCTGTGTGTAGGAGGGATTTCGGCCTGAGAGCGGGCCGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATTGGCGACGGTGTCGCCCGTGTTTTCGTTGGCGGGTGCCTGGGCTGGTGGGAACAGCCGCCCGAAGGAAGCA 148
Query 1 --ATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGC 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGC 222
Query 73 AGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAATATTATCTCTGTGGTTTTTGTCCTGCGGAATTGTTCAC 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAATATTATCTCTGTGGTTTTTGTCCTGCGGAATTGTTCAC 296
Query 147 AAATACACGTTCTGATCTTGATGTATTTGGAAGAGGAGATAACATTAGTGATGTCAGCAAATTTTTGGAAGATG 220
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 297 AAATACACGTTCTGATCTTGATGTATTTGGAAGAGGAGATAACATTAGAGATGTCAGCAAATTTTTGGAAGATG 370
Query 221 ACAAGTGGATGGAGGAG--------------------------------------------------------- 237
|||||||||||||||||
Sbjct 371 ACAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGA 444
Query 238 -------------------------------------------------------------------------- 237
Sbjct 445 TACTAAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGGCACCAGGTCCGTGTG 518
Query 238 -------------------------------------------------------------------------- 237
Sbjct 519 AAAAAATTCATGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGA 592
Query 238 -------------------------------------------------------------------------- 237
Sbjct 593 GATTTTTTGCGATACTTACAGAGCTTACTTGCAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTCGTTTGGC 666
Query 238 -------------------------------------------------------------------------- 237
Sbjct 667 ATTATCTCAAAACCAGCAGTCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAGAAAAAATTCAGGTTCTAA 740
Query 238 -------------------------------------------------------------------------- 237
Sbjct 741 CAGACAAAATTGATGTACTTCTGCAACAGATTGAAGAATTAGGGTCTGAAGGAAAAGTAGAAGAAGCCCAGGGG 814
Query 238 -------------------------------------------------------------------------- 237
Sbjct 815 ATGATGAAATTAGTTGAGCAATTAAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTT 888
Query 238 -------------------------------------------------------------------------- 237
Sbjct 889 TGCTGCACAAGAAAAACAAATGGAAGTTTGTGAAGTATGTGGAGCCTTTTTAATAGTAGGAGATGCCCAGTCCC 962
Query 238 -------------------------------------------------------------------------- 237
Sbjct 963 GGGTAGATGACCATTTGATGGGAAAACAACACATGGGCTATGCCAAAATTAAAGCTACTGTAGAAGAATTAAAA 1036
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1037 GAAAAGTTAAGGAAAAGAACCGAAGAACCTGATCGTGATGAGCGTCTAAAAAAGGAGAAGCAAGAAAGAGAAGA 1110
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1111 AAGAGAAAAAGAACGGGAGAGAGAAAGGGAAGAAAGAGAAAGGAAAAGACGAAGGGAAGAGGAAGAAAGAGAAA 1184
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1185 AAGAAAGGGCTCGTGACAGAGAAAGAAGAAAGAGAAGTCGTTCACGAAGTAGACACTCAAGCCGAACATCAGAC 1258
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1259 AGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGAAGGCGGAGCAGAAGTAGAGATCG 1332
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1333 ACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGAAGATCAAAAA 1406
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1407 GCCGGGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGAACAAGATAGAAAATCCAAGGAGAAA 1480
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1481 GGGCAGAAGATAAGATTATTGGACTGACTACTAGTCCTCTACGGGACAACAAGACGACTCTTCCTCATTGAAGC 1554
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1555 TACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGATCTGATGATA 1628
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1629 AAAAAAGTAGTGTGAAGTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAACACTGAATCGAAGGAAAGTGAT 1702
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1703 ACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGTGCAGCGTAAGTATGCACAGATGAAGAT 1776
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1777 GGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTGAAGGAAAAGACAGTGTAGTCCTGCAAAACATTT 1850
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1851 TGAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTGGAAATTAT 1924
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1925 CGCCCACATTTGTAATATAGTCGCCATTGAAAAGTTAATTATCCTTTTTTTAGGGATTTTGATGTCATTTCTTT 1998
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1999 TTTTTTTTTAATAAAAAGGTTGAACTGTTTTTTTTTTTCTTTTTGGTATTAAGTCCATCTTGTGTTGGTACATT 2072
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2073 GGCAGAGACATATGCTTTAAAAACTTAAATATTTCGGAGGCACATGTTGGACTACTTTGTTTTAATTAAACTGC 2146
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2147 TAGTATTTCTTTGTCAAGGATGTTTCTAGTTTTTTGCTTTATTGCCTTGCATTCTAATGCAGTTTGTTCTGTAA 2220
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2221 CTCGAGAGCCAGTAGCATTGGATTGATGGAAGTGTAGGGTTTATGAATTATTGCAGCTGACTACCATACCTCAC 2294
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2295 ACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAAAAATCAAGGATTCAGTCAAACTAAGCAGGTAC 2368
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2369 TCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCCTGTGATCTTTACGCTTAACTGT 2442
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2443 TGTGTATCTTTTTTGTTCTTTACAAGAAGTGCAGAGGGGTTTTTTGTGTATTGCGTGAAAACTTATAAAACAAA 2516
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2517 TGTTAACAGAATGGAATTTTTTTTCAACTGTATGTAGGGCTGCAGTGGTGGCCAGAATTAGATATCTTTAAAGA 2590
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2591 ATTTTAAATACAATAAACACTTCATATTATTCGCCTTGTTACACTCAATGCAATTCTCAAGTCTATAAGAGGTA 2664
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2665 TGTGCTTAATATTTCCTACTGTGTAGGAGAATTTGCAGTCAGCCATAGGTATGTAGGAATAGTCACTCACTGGC 2738
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2739 TGATACATTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGAAATCAAAGAACTGATGCAC 2812
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2813 TATATAGAACGAATTTGGGTTTTTAAAGAAATATTAAAAGTTAGGTACTGTAAGTGTTCTTAAAACCTGTAAAC 2886
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2887 TTCATTCTGTGGGCTAGTGGTGTGGGACAAAATATTCCTAATGAAAGGAAGTACCAATTAGTTGATTTGTTGGT 2960
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2961 GGCATTCCCCTTTTGGGAAAGCAATGTAAGGTTATGTCTGTGTATGTCATTCACACTTAGGCAAGCATACACAG 3034
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3035 GCACATGGCTTTAAGAACCACACTGATGCCTTGATAATTAAAAAGAATACAAGCATTCCATGTACACATGTTAA 3108
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3109 TTAGCAGTTAGTGACTGGGCCAACACTTTCTCATAAAAATTGGCCTTTTACATGTTGTCTAATTATCATTTTTC 3182
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3183 CCCAAATTTTGCGTTGTAGGACTACTGTTCGAAGATTTTTGGAAGAATACTGAGAACGGCATAAAGTGAAGATC 3256
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3257 GACATTTAAAAAATGAGGTGAAAGAAAGCTATAGTGGCATAGAAAAAGTATAAAGCTCAGTTAGTTTTTTTATT 3330
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3331 ATTATTATTATTAAAAGTTAATTCAGGACTGATGTGACCTACCAGATTTCAGAACATGTGTTAATAGTATATAT 3404
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3405 GCCACTGAAAACTTAGGTCCTGTATCATACTTTTTTCTTTAAGACTTTTTAAGAAATATTACTTAAACATGTGG 3478
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3479 CTTGCTCAGTGTTTAATTGCAAGTTTTCAATCTTGGACTTTGAAAACAGGATTAAACGTTAGTATTCGTGTGAA 3552
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3553 TCAGACTAAGTGGGATTTCATTTTTACAACTCTGCTCTACTTAGCCTTTGGATTTAGAAGTAAAAATAAAGTAT 3626
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3627 CTCTGACTTTCTGTTACAAAGTTGATTGTCTCTGTCATTGAAAAGTTTTAGTATTAATCTTTTTCTAATAAAGT 3700
Query 238 ------------- 237
Sbjct 3701 TATTGACTCTGAA 3713
