Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12028
- Subject:
- XR_380424.3
- Aligned Length:
- 2122
- Identities:
- 769
- Gaps:
- 1269
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCACGGAGGGGGCGGGTCCTCGCCGCGCGCAGTGCTTCGGCCAGAGCTCGAGGCGCTGCTTACCGTCGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCTAGGAGACGCCGCGGCCGCCGCTGGGTCGCATCGGGCTTCGCGTCGCGCCGTGTACGCCTCCTCTGCCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCCGACCGGCAGCATAGGCTCTACCTGGTCCGCGGCCTCCCTGTCCGCGGCGGGGCAGGTGGTTTTCCTGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAACTCCTGCCCTGCCTTCCGGTAGCTGGCTCGTGGCTCCCAACTCTGAGCTCTCGGTGAACCTGGGAAGGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGAGAACAGGGTAGGTGAGCTCCAGCCAAGCCAGCCCTGCCAGAGACCTTCAGTTTCGGTGGCTGGTGCTCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCCACAGTGCGCTTCAGCATTTGGATCTATGGGCCTGCTTTGAACCATAGAGCCTGCCTATGGGGGAAGGTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCCATCTGGGCCCCACCCATCCTTCCTCACAGCACCCTCGGCACCTTAAGCCACCACCCTGAGCTACATTTTG 518
Query 1 --------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGA 66
|||||.||.||||||||.||||||||||||||.||.|||||.|||||||||||.||||||||||||
Sbjct 519 GAGGGAAGATGGAATCTAAGGTCTCGGAAGGTGGCCTGAACGTAACCCTGACCATCCGCCTACTGATGCATGGA 592
Query 67 AAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGAT 140
||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.|||||
Sbjct 593 AAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACAGTAAAGAAGATGCGTGAAGAGAGTGGCGCCAGGAT 666
Query 141 CAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCT 214
||||||||||||||||||||||||||||||.||.||.||.|||||||||||.||.|||||||||||||||||||
Sbjct 667 CAACATCTCAGAGGGAAACTGCCCAGAGAGAATCGTTACAATCACAGGCCCAACTGACGCCATCTTCAAGGCCT 740
Query 215 TTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCC 288
||||.||||||||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||.
Sbjct 741 TTGCTATGATCGCGTACAAGTTTGAGGAGGACATCATTAATTCCATGAGCAACAGCCCTGCCACCAGCAAGCCT 814
Query 289 CCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAA 362
||||||||.|||.|.||.|||||.||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 815 CCAGTGACACTGCGACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGATCAA 888
Query 363 GGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGG 436
|||||||.||||||||||||||||.|||||.||||||||.||.||||||||||||||||||||.|||||.||.|
Sbjct 889 GGAGATCCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGGTGACATGCTGCCCAACTCCACAGAGCGGGCAG 962
Query 437 TGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTAC 510
||||.|||||.|||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||.||
Sbjct 963 TGACTATCTCAGGGACCCCAGACGCCATCATCCAGTGTGTGAAACAGATCTGTGTGGTCATGCTGGAGTCC--- 1033
Query 511 ACAATCCAGGGACAGTATGCCA----TCCCTCACCCGGATTTGACCAAGCTCCACCAGTTGGCCATGCAGCAAA 580
|||..||.|| .||||| ||||| ||| ||| ||||
Sbjct 1034 -----CCACCGAAAG-GTGCCACCATTCCCT-ACC--------------------------GCC------CAAA 1068
Query 581 CCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAA 654
.|||...|||.||||| |.|| .|||..|.||.|...|| ||||..|||.|||
Sbjct 1069 GCCCGCCTCCACCCCT--GTCA-----------TTTTTGCAGGTGGTCAG--GCCTACACAATCC--------- 1118
Query 655 GCTCAAAATCTGATGGGCCAGT----CATC----------AGGTCTGGACGCCAGCCCACCGGCCAGCACTCAT 714
.|||.|||| |||| |.|||||||.||||||||||||||||||||||||
Sbjct 1119 -------------AGGGACAGTACGCCATCCCCCACCCAGATGTCTGGATGCCAGCCCACCGGCCAGCACTCAT 1179
Query 715 GAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACA 788
||||||||||||||||||||| ||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 1180 GAGCTCACCATTCCCAATGAT-------GCTGCATAATTGGACGCCAAGGCACCAAAATCAATGAAATCCGACA 1246
Query 789 GATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGA 862
||||||||||||||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||.||||
Sbjct 1247 GATGTCTGGAGCTCAGATCAAAATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGA 1320
Query 863 CCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGG--GCA 934
||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||| |||
Sbjct 1321 CCCCAGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCACCGGGATGGGTGCA 1394
Query 935 CGCTG--------------------------------------------------------------------- 939
|.||.
Sbjct 1395 CTCTAACCTACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTG 1468
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1469 TACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGC 1542
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1543 CCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTC 1616
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1617 AACGTATTCCCAAATGTGATGTTTCAGAGATTTATTCCTCAGTATCCATGTGACTGTCTGTTTAAAAGTTGGTT 1690
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1691 TGATGCTTTAACAGCACTTCCTATGTCCTGCTGTCCCTTGTTCTCAGAGACCCTCCTCTCTCACCCAGTCTACT 1764
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1765 GACTCATTTCCGCCCTAGGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAG 1838
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1839 AGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGG 1912
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1913 GATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAA 1986
Query 940 -------------------------------------------------- 939
Sbjct 1987 GTTCATCTGCACCCATCAGAGTTTAATAAATGTCGTGTTCCTCCCCCATG 2036
