Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12044
Subject:
XM_006506872.2
Aligned Length:
3622
Identities:
2154
Gaps:
1067

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA  666

Query    1  ---------------------------------------------------------------ATGCGGACCTA  11
                                                                           |||||||||||
Sbjct  667  GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA  740

Query   12  TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA  85
            ||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct  741  TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA  814

Query   86  CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA  141
            |||||||||||||||                  |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct  815  CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA  888

Query  142  ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG  215
            ||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct  889  ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG  962

Query  216  CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA  289
            |||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct  963  CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA  1036

Query  290  CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT  363
            ||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037  CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT  1110

Query  364  GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG  437
            ||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111  GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG  1184

Query  438  TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC  511
            |||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185  TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC  1258

Query  512  AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA  585
            ||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259  AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA  1332

Query  586  ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC  659
            |||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333  ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC  1406

Query  660  AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG  733
            .||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.|||||   |||.||.|
Sbjct 1407  GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG  1477

Query  734  GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT  807
            ||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478  GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT  1551

Query  808  TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC  879
            ||..||||.|||||||||||||||||.|||.|  ||  .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552  TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC  1623

Query  880  CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG  953
            |||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624  CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG  1697

Query  954  AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC  1027
            .||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698  GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC  1771

Query 1028  ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG  1101
            |||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772  ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG  1845

Query 1102  AGCCTCCAAGGGAAAACG------------------------------------CTGTCACAAGATGAAGGTAG  1139
            |||||||||||.|.||||                                    |||||||||||||||.||||
Sbjct 1846  AGCCTCCAAGGCAGAACGTTCTTAAGACAGAAGAACAAGATAAGTCTCTATTGTCTGTCACAAGATGAATGTAG  1919

Query 1140  AGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAGCCGATTATGTGAACAAGATA  1213
            ||||||||||||||||||||||||||||||||.||.||||||||||||.||||||.||||.||||||||.||||
Sbjct 1920  AGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTGATGCCAAATTAAGCAGATTGTGTGAACAGGATA  1993

Query 1214  AAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTA  1287
            |||||||.|..||.|||||.|||||.||.|||||.||.|||||||||||||||||||||||||||||.|||||.
Sbjct 1994  AAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGAAATACACGCTTGAGCAAGCCTTGCTG  2067

Query 1288  TCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGA  1361
            ||||||||||||||||||||.|||.||||.|||||||||||.||||||||.||.||||||||.||.||||||||
Sbjct 2068  TCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGCTGCCATTCAAACTGTGGTGTTGCAGAGGGATGA  2141

Query 1362  TTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGAATTGGAACGAGCATGGAGAG  1435
            ..|.|||||.||||||||.||.||||||||.|||||.||.|||||||||||.||..||||||||||.|||||||
Sbjct 2142  CCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCACTGCTGAGCTGGAACGAGCCTGGAGAG  2215

Query 1436  AATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCTGGATCACCTTGGTGAA  1509
            |||||||.|||||.|||||.|||||.||||||||||||.||||||||||.|..|||||.||.|.||||||.|||
Sbjct 2216  AATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGACCAGATGCAGGGTCAGCTCGACCGCCTTGGAGAA  2289

Query 1510  GTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGA  1583
            ||.||||..||.||.|||||||||||.||.|||||||||||.||.||.||.|||.|||||||.|||||||||||
Sbjct 2290  GTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCAAAAGGAGCTCTGGAGAATTCAAGATGTCATGGA  2363

Query 1584  AGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAA---TAGGTATGATAGGATCAAAGCCTTTCTCAA  1654
            .|||.||||.|||||.||.|||||||||||..||.||||||   |||||.||..|||||||||||||||||||.
Sbjct 2364  GGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGTAGGTCTGGCAGGATCAAAGCCTTTCTCAT  2437

Query 1655  CAGTTAAGTACAA-------------------------------------------------------------  1667
            |||||||||||||                                                             
Sbjct 2438  CAGTTAAGTACAAGAGCGAGGAAGAGGAAGTAGTCCCACCTCGGCCTCCACTTCCTCGGTCTTATGACTTTACA  2511

Query 1668  --------------------------------------------------------------------------  1667
                                                                                      
Sbjct 2512  GAGCAGCCTCCCATAATCCCCCCTCTGCCCAGTGATAGCAGCTCCTTGCTCTGTTATAGCAGGGGCCCCGTGCA  2585

Query 1668  ---------------------------------------------AAATGAG----------GGTCCAGATTAT  1686
                                                         ||||| |          ||||||||||||
Sbjct 2586  TCTGCCTGAAGACAAGAAGATTCATCAAGTTCAAGGATATCCAAGAAATG-GATCTCACTGTGGTCCAGATTAT  2658

Query 1687  AGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGA  1760
            |||||||||||||||||.|||||||||||.||||||||||||||.|||||||||||.|||||||||||.|||||
Sbjct 2659  AGACTCTACAAGAGTGAGCCAGAGTTAACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGA  2732

Query 1761  ACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAA  1834
            .||.|||||.||||.||||.||.||||.||||||||||||||.|||||.||.||   |||.||||..|||.|||
Sbjct 2733  GCCAGTTTCTGAGACAGAAGCTCCAGTCGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACAA  2803

Query 1835  AATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTA  1908
            |.|||||.||||||||.||.||.||.||||||||||||||.|||||||||||.||||||||||||.||||.|||
Sbjct 2804  AGTCACCCACACCCGAGTCCTCCACGATAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTA  2877

Query 1909  AGAACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGA  1982
            |||||||||||||||||||||||.|||||.|||||.|||.|||||||.|||.|||||||.||.|||||||||||
Sbjct 2878  AGAACGGAAAGACCAAGAAGTGCCGTGGAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGA  2951

Query 1983  AGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCG  2056
            ||||||..|.||.||.||.||.|||||.||.||.||.|||||||||||||||||.||.|||.|.|.|||..|||
Sbjct 2952  AGAGCAGCTAGAGAGGATCAGGAGACACCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCG  3025

Query 2057  GTGCTTCAGACCAGTCACCCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGA  2130
            |||||||.||                  |||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.|
Sbjct 3026  GTGCTTCCGA------------------CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCTA  3081

Query 2131  AGGAGGGATGA------TAAGGAACTGGACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTC  2197
            |||||||||||      ||||||.||.|||||.| ||| .||||||||||||||||||||||||.|.||.||||
Sbjct 3082  AGGAGGGATGATAACGTTAAGGAGCTAGACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACTC  3154

Query 2198  CTGCA--ACAGAAATTGT--TCAACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAA  2267
            |.|||  ||||    |||  |||.|||.||||..|.||||||||.||||..|||.||.|||.|.||.|||||| 
Sbjct 3155  CAGCAGCACAG----TGTGCTCACCTAGAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA-  3223

Query 2268  AACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATA  2341
                          .||.|||||||||||....||||||.|||||||||.|...|||||.||||.|||.|||.|
Sbjct 3224  --------------GATCTGAAATGCTTTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGA  3283

Query 2342  AAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCGC  2408
            |.||||||.|.|||||..|..|||.||..||||...|||.|||||||||.||.||.||       |||||.|  
Sbjct 3284  AGGAAAGACAGAAAGAGCAGGTGCATGCCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC--  3355

Query 2409  AAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTT  2482
              ||||.|   ..||||..|..|||||.|||   .||.||   |||.||.|.||..|||||||||||.||..||
Sbjct 3356  --ATCAGA---TGGAAGGCCCCCCTGAGGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCTT  3418

Query 2483  CTTACGAATCAACTCCTGAGGTTTCTAGAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGA  2555
            |.|..||..||.||||||||.||.|||| ||| ||||||||.|   ||||||.||||||||||||.||||||||
Sbjct 3419  CCTGTGAGCCAGCTCCTGAGATTCCTAG-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGA  3488

Query 2556  GTCCT---CGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG  2622
            .||||   |||||   .|||.|||..||||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3489  CTCCTCCACGGCA---GCAGATCCGCCCACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG  3555

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