Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12044
Subject:
XM_006506875.2
Aligned Length:
3549
Identities:
2151
Gaps:
993

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA  666

Query    1  ---------------------------------------------------------------ATGCGGACCTA  11
                                                                           |||||||||||
Sbjct  667  GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA  740

Query   12  TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA  85
            ||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct  741  TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA  814

Query   86  CAGAACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAAC  159
            ||||||||||||||||||||||||||||||||.||||.|.||||.||||.||||||||||||||||||||||||
Sbjct  815  CAGAACCTGTGAAAAGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAAACCAATAACATTCCCAAC  888

Query  160  CATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAA  233
            ||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.|||||||||||||||||||.
Sbjct  889  CACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAGCAAAATTGAAGAAAAAAG  962

Query  234  GGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAA  307
            |||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||||||||||||.|||||.|
Sbjct  963  GGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAACAAAAATTAACAGTGTGA  1036

Query  308  AGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATC  381
            ||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|||.|||||||||||.|||
Sbjct 1037  AGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAATGTACACTACAGACCCATC  1110

Query  382  AACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATAC  455
            ||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.|||||.|.||.|||.|||.|
Sbjct 1111  AATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGGTGGGAGTCACCCAAATGC  1184

Query  456  AGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTA  529
            |||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|||.|.||.||||||||||
Sbjct 1185  AGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAACAGCTAGAGCAGTGGATTA  1258

Query  530  AAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATG  603
            ||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.||||||||.||||||||||||
Sbjct 1259  AAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAAACATTGCCAAGAAATATG  1332

Query  604  CCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAG  677
            |||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||.||||||||||||||.||
Sbjct 1333  CCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCCGAGAAACAGCAAGACCAG  1406

Query  678  GCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGA  751
            .|||||.|||||||||||.||||||.||||...||||||.|||||   |||.||.|||||.||.|||||.|||.
Sbjct 1407  ACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGGGAGCAGAAGAGAAGCGGC  1477

Query  752  GGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACC  825
            |.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||||..||||.|||||||||
Sbjct 1478  GATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTTTACCACAAGCAGAGCACC  1551

Query  826  CTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATT  897
            ||||||||.|||.|  ||  .||||.|||||||||.|||||||..|..|.|||||||||||.||||||||.||.
Sbjct 1552  CTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGACCAGACGATGCACTCCATC  1623

Query  898  CCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGT  971
            |||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||.||.|||||.||.|||||
Sbjct 1624  CCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCGGACGTACAGGTCAGAAGT  1697

Query  972  GTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATG  1045
            |.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||||||||||||||||||||
Sbjct 1698  GACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATCACCCTAAGCATGTCTATG  1771

Query 1046  TGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAAC-  1118
            |..||||||||||||||.|||||||||||.|.|||||||||.|||||||||||||||||||||||||.|.||| 
Sbjct 1772  TAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAGAGCCTCCAAGGCAGAACG  1845

Query 1119  --------------------------------------------------------------------------  1118
                                                                                      
Sbjct 1846  CCAGAGGAGCTCACACTGCTGCTAATAAAGCTGAGACGGCAGCAGGCAGAGCTGAGTAGTGTCCGGGAGCACAC  1919

Query 1119  --------------------------------------------------------------------------  1118
                                                                                      
Sbjct 1920  CTTAGCACAGCTCATGCAGCTGAAACTTGAGGCCCACAGCCCAAAGAATGAGATTCTTTCACATCATCTCCAAA  1993

Query 1119  -------------------------GCTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAA  1167
                                     ||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1994  GGAACACCATATATTTGGATCATCAGCTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAA  2067

Query 1168  GAAGTAGATATTGATGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACT  1241
            ||||.||.||||||||||||.||||||.||||.||||||||.|||||||||||.|..||.|||||.|||||.||
Sbjct 2068  GAAGCAGGTATTGATGCCAAATTAAGCAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCT  2141

Query 1242  TCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATG  1315
            .|||||.||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||||||.|||.|||
Sbjct 2142  GCAGCAGCTGCACAAGGAGAAATACACGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATG  2215

Query 1316  CAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGT  1389
            |.|||||||||||.||||||||.||.||||||||.||.||||||||..|.|||||.||||||||.||.||||||
Sbjct 2216  CTGATAACCCAGCTGCCATTCAAACTGTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGT  2289

Query 1390  CGAGAACTTTCTCGAGCCACTGCCGAATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAAC  1463
            ||.|||||.||.|||||||||||.||..||||||||||.||||||||||||||.|||||.|||||.|||||.||
Sbjct 2290  CGGGAACTCTCCCGAGCCACTGCTGAGCTGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGAC  2363

Query 1464  TGTTACCAGGAACCAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGC  1537
            ||||||||||.||||||||||.|..|||||.||.|.||||||.|||||.||||..||.||.|||||||||||.|
Sbjct 2364  TGTTACCAGGGACCAGATGCAGGGTCAGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAAC  2437

Query 1538  GTGCACAGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGA  1611
            |.|||||||||||.||.||.||.|||.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||
Sbjct 2438  GGGCACAGATTCAAAAGGAGCTCTGGAGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGA  2511

Query 1612  GGTACTACAGAAATAGGTATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTA  1685
            ||..||.||||||.||||.||..|||||||||||||||||||.|||||||||||||.|..||||||||||||||
Sbjct 2512  GGCTCTTCAGAAACAGGTCTGGCAGGATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGGTCCAGATTA  2585

Query 1686  TAGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAG  1759
            ||||||||||||||||||.|||||||||||.||||||||||||||.|||||||||||.|||||||||||.||||
Sbjct 2586  TAGACTCTACAAGAGTGAGCCAGAGTTAACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAG  2659

Query 1760  AACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCA  1833
            |.||.|||||.||||.||||.||.||||.||||||||||||||.|||||.||.||   |||.||||..|||.||
Sbjct 2660  AGCCAGTTTCTGAGACAGAAGCTCCAGTCGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACA  2730

Query 1834  AAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCT  1907
            ||.|||||.||||||||.||.||.||.||||||||||||||.|||||||||||.||||||||||||.||||.||
Sbjct 2731  AAGTCACCCACACCCGAGTCCTCCACGATAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCT  2804

Query 1908  AAGAACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGG  1981
            ||||||||||||||||||||||||.|||||.|||||.|||.|||||||.|||.|||||||.||.||||||||||
Sbjct 2805  AAGAACGGAAAGACCAAGAAGTGCCGTGGAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGG  2878

Query 1982  AAGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATC  2055
            |||||||..|.||.||.||.||.|||||.||.||.||.|||||||||||||||||.||.|||.|.|.|||..||
Sbjct 2879  AAGAGCAGCTAGAGAGGATCAGGAGACACCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTC  2952

Query 2056  GGTGCTTCAGACCAGTCACCCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCG  2129
            ||||||||.||                  |||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.
Sbjct 2953  GGTGCTTCCGA------------------CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCT  3008

Query 2130  AAGGAGGGATGA------TAAGGAACTGGACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACT  2196
            ||||||||||||      ||||||.||.|||||.| ||| .||||||||||||||||||||||||.|.||.|||
Sbjct 3009  AAGGAGGGATGATAACGTTAAGGAGCTAGACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACT  3081

Query 2197  CCTGCA--ACAGAAATTGT--TCAACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAA  2266
            ||.|||  ||||    |||  |||.|||.||||..|.||||||||.||||..|||.||.|||.|.||.||||||
Sbjct 3082  CCAGCAGCACAG----TGTGCTCACCTAGAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA  3151

Query 2267  AAACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGAT  2340
                           .||.|||||||||||....||||||.|||||||||.|...|||||.||||.|||.|||.
Sbjct 3152  ---------------GATCTGAAATGCTTTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAG  3210

Query 2341  AAAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCG  2407
            ||.||||||.|.|||||..|..|||.||..||||...|||.|||||||||.||.||.||       |||||.| 
Sbjct 3211  AAGGAAAGACAGAAAGAGCAGGTGCATGCCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC-  3283

Query 2408  CAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATT  2481
               ||||.|   ..||||..|..|||||.|||   .||.||   |||.||.|.||..|||||||||||.||..|
Sbjct 3284  ---ATCAGA---TGGAAGGCCCCCCTGAGGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCT  3345

Query 2482  TCTTACGAATCAACTCCTGAGGTTTCTAGAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTG  2554
            ||.|..||..||.||||||||.||.|||| ||| ||||||||.|   ||||||.||||||||||||.|||||||
Sbjct 3346  TCCTGTGAGCCAGCTCCTGAGATTCCTAG-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTG  3415

Query 2555  AGTCCT---CGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG  2622
            |.||||   |||||   .|||.|||..||||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3416  ACTCCTCCACGGCA---GCAGATCCGCCCACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG  3483

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