Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12044
- Subject:
- XM_006506882.2
- Aligned Length:
- 3375
- Identities:
- 2151
- Gaps:
- 819
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAAC 159
||||||||||||||||||||||||||||||||.||||.|.||||.||||.||||||||||||||||||||||||
Sbjct 815 CAGAACCTGTGAAAAGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAAACCAATAACATTCCCAAC 888
Query 160 CATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAA 233
||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.|||||||||||||||||||.
Sbjct 889 CACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAGCAAAATTGAAGAAAAAAG 962
Query 234 GGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAA 307
|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||||||||||||.|||||.|
Sbjct 963 GGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAACAAAAATTAACAGTGTGA 1036
Query 308 AGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATC 381
||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|||.|||||||||||.|||
Sbjct 1037 AGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAATGTACACTACAGACCCATC 1110
Query 382 AACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATAC 455
||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.|||||.|.||.|||.|||.|
Sbjct 1111 AATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGGTGGGAGTCACCCAAATGC 1184
Query 456 AGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTA 529
|||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|||.|.||.||||||||||
Sbjct 1185 AGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAACAGCTAGAGCAGTGGATTA 1258
Query 530 AAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATG 603
||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.||||||||.||||||||||||
Sbjct 1259 AAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAAACATTGCCAAGAAATATG 1332
Query 604 CCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAG 677
|||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||.||||||||||||||.||
Sbjct 1333 CCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCCGAGAAACAGCAAGACCAG 1406
Query 678 GCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGA 751
.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|||||.||.|||||.|||.
Sbjct 1407 ACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGGGAGCAGAAGAGAAGCGGC 1477
Query 752 GGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACC 825
|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||||..||||.|||||||||
Sbjct 1478 GATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTTTACCACAAGCAGAGCACC 1551
Query 826 CTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATT 897
||||||||.|||.| || .||||.|||||||||.|||||||..|..|.|||||||||||.||||||||.||.
Sbjct 1552 CTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGACCAGACGATGCACTCCATC 1623
Query 898 CCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGT 971
|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||.||.|||||.||.|||||
Sbjct 1624 CCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCGGACGTACAGGTCAGAAGT 1697
Query 972 GTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATG 1045
|.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||||||||||||||||||||
Sbjct 1698 GACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATCACCCTAAGCATGTCTATG 1771
Query 1046 TGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACG 1119
|..||||||||||||||.|||||||||||.|.|||||||||.|||||||||||||||||||||||||.|.||||
Sbjct 1772 TAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAGAGCCTCCAAGGCAGAACG 1845
Query 1120 CTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAG 1193
|||||||||||||||.||||||||||||||||||||||||||||||||||||.||.||||||||||||.|||||
Sbjct 1846 CTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTGATGCCAAATTAAG 1919
Query 1194 CCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACA 1267
|.||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.||||||||||||||||
Sbjct 1920 CAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGAAATACA 1993
Query 1268 CGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACA 1341
|||||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||.||||||||.||.
Sbjct 1994 CGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGCTGCCATTCAAACT 2067
Query 1342 GTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGA 1415
||||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.|||||||||||.||
Sbjct 2068 GTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCACTGCTGA 2141
Query 1416 ATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGC 1489
..||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.||||||||||.|..|
Sbjct 2142 GCTGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGACCAGATGCAGGGTC 2215
Query 1490 AGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGG 1563
||||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.|||||||||||.||.||.||.|||
Sbjct 2216 AGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCAAAAGGAGCTCTGG 2289
Query 1564 CGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTATGATAGG 1637
.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.||||||.||||.||..|||
Sbjct 2290 AGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGGTCTGGCAGG 2363
Query 1638 ATCAAAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGT 1711
||||||||||||||||.|||||||||||||.|..||||||||||||||||||||||||||||||||.|||||||
Sbjct 2364 ATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGGTCCAGATTATAGACTCTACAAGAGTGAGCCAGAGT 2437
Query 1712 TAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCA 1785
||||.||||||||||||||.|||||||||||.|||||||||||.|||||.||.|||||.||||.||||.||.||
Sbjct 2438 TAACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCTCCA 2511
Query 1786 GTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGAC 1859
||.||||||||||||||.|||||.||.|| |||.||||..|||.||||.|||||.||||||||.||.||.||
Sbjct 2512 GTCGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTCCAC 2582
Query 1860 AATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAG 1933
.||||||||||||||.|||||||||||.||||||||||||.||||.||||||||||||||||||||||||||.|
Sbjct 2583 GATAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTGCCG 2656
Query 1934 TGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGA 2007
||||.|||||.|||.|||||||.|||.|||||||.||.|||||||||||||||||..|.||.||.||.||.|||
Sbjct 2657 TGGAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGGAGA 2730
Query 2008 CATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACA 2081
||.||.||.||.|||||||||||||||||.||.|||.|.|.|||..||||||||||.||
Sbjct 2731 CACCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA--------------- 2789
Query 2082 AAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA------TAAGGAAC 2149
|||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.|||||||||||| ||||||.|
Sbjct 2790 ---CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGGAGC 2860
Query 2150 TGGACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TCAAC 2218
|.|||||.| ||| .||||||||||||||||||||||||.|.||.|||||.||| |||| ||| |||.|
Sbjct 2861 TAGACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTCACC 2929
Query 2219 TAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATG 2292
||.||||..|.||||||||.||||..|||.||.|||.|.||.|||||| .||.|||||||
Sbjct 2930 TAGAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA---------------GATCTGAAATG 2988
Query 2293 CTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCC 2366
||||....||||||.|||||||||.|...|||||.||||.|||.|||.||.||||||.|.|||||..|..|||.
Sbjct 2989 CTTTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGTGCA 3062
Query 2367 TGAGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACCAGAAGAGCATCCT 2433
||..||||...|||.|||||||||.||.||.|| |||||.| ||||.| ..||||..|..|||
Sbjct 3063 TGCCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCCCCT 3129
Query 2434 GAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTC 2507
||.||| .||.|| |||.||.|.||..|||||||||||.||..|||.|..||..||.||||||||.||.|
Sbjct 3130 GAGGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGATTCC 3197
Query 2508 TAGAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTTCCA 2577
||| ||| ||||||||.| ||||||.||||||||||||.||||||||.|||| ||||| .|||.|||.
Sbjct 3198 TAG-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGATCCG 3264
Query 2578 TCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG 2622
.||||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3265 CCCACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG 3309
